Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4169 Papaver somniferum HOM05D005945 ORTHO05D006749 0.0e+00 1687.9 1023 100.0
PSO675G9049 Papaver somniferum HOM05D005945 ORTHO05D006749 0.0e+00 1568.5 1024 94.9
TAR376G0838 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.5e-75 288.9 1062 29.1
TAR628G0886 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.4e-60 239.2 314 47.5
Nn5g29549 Nelumbo nucifera HOM05D005945 ORTHO05D006749 1.0e-58 233.0 1087 27.4
GSVIVG01009690001 Vitis vinifera HOM05D005945 ORTHO05D006749 8.8e-47 193.4 284 41.9
MBI16_g17464_MAGBIO Magnolia biondii HOM05D005945 ORTHO05D006749 2.6e-46 191.8 445 34.6
CSS0038834 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 3.3e-46 191.4 296 39.9
Dinv39407 Davidia involucrata HOM05D005945 ORTHO05D006749 3.7e-45 188.0 367 37.1
CSS0001698 Camellia sinensis var. sinensis HOM05D005945 ORTHO05D006749 8.3e-45 186.8 391 35.3
Potri.014G181200 Populus trichocarpa HOM05D005945 ORTHO05D006749 8.3e-45 186.8 366 35.2
TAR628G0416 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.1e-44 186.4 206 49.5
Aqoxy6G01057 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 1.3e-42 179.5 236 48.3
COL.COLO4_26338 Corchorus olitorius HOM05D005945 ORTHO05D006749 3.8e-42 177.9 1100 25.0
Nitab4.5_0000110g0520 Nicotiana tabacum HOM05D005945 ORTHO05D006749 9.4e-41 173.3 315 36.5
QL02p007988 Quercus lobata HOM05D005945 ORTHO05D006749 1.6e-40 172.6 416 33.2
Eucgr.F01555 Eucalyptus grandis HOM05D005945 ORTHO05D006749 2.7e-40 171.8 306 38.2
Actinidia15315 Actinidia chinensis HOM05D005945 ORTHO05D006749 4.7e-40 171.0 405 34.1
Manes.05G161400 Manihot esculenta HOM05D005945 ORTHO05D006749 4.7e-40 171.0 360 35.3
Psat7g242000 Pisum sativum HOM05D005945 ORTHO05D006749 6.1e-40 170.6 258 40.7
Gohir.D06G008100 Gossypium hirsutum HOM05D005945 ORTHO05D006749 1.4e-39 169.5 417 34.3
Gorai.010G010800 Gossypium raimondii HOM05D005945 ORTHO05D006749 1.4e-39 169.5 417 34.3
Lj4A42T73 Lonicera japonica HOM05D005945 ORTHO05D006749 1.4e-39 169.5 212 46.7
Thecc.08G024700 Theobroma cacao HOM05D005945 ORTHO05D006749 1.4e-39 169.5 384 35.9
Cfa018140 Carpinus fangiana HOM05D005945 ORTHO05D006749 5.2e-39 167.5 487 29.0
Gohir.A06G010700 Gossypium hirsutum HOM05D005945 ORTHO05D006749 6.8e-39 167.2 323 39.0
Oeu056183.1 Olea europaea HOM05D005945 ORTHO05D006749 6.8e-39 167.2 268 41.0
Nitab4.5_0003783g0040 Nicotiana tabacum HOM05D005945 ORTHO05D006749 8.8e-39 166.8 282 39.0
Cpa.g.sc64.76 Carica papaya HOM05D005945 ORTHO05D006749 1.5e-38 166.0 1093 24.7
Prupe.1G381200 Prunus persica HOM05D005945 ORTHO05D006749 2.6e-38 165.2 253 41.5
Sc15g0006890 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.6e-38 165.2 287 39.7
Haze_17984 Corylus avellana HOM05D005945 ORTHO05D006749 3.4e-38 164.9 394 33.8
RcHm_v2.0_Chr6g0300761 Rosa chinensis HOM05D005945 ORTHO05D006749 1.3e-37 162.9 251 40.6
Sopen04g033790 Solanum pennellii HOM05D005945 ORTHO05D006749 1.7e-37 162.5 436 30.7
MSTRG.25161 Avicennia marina HOM05D005945 ORTHO05D006749 2.8e-37 161.8 307 37.5
CiPaw.15G076000 Carya illinoinensis HOM05D005945 ORTHO05D006749 3.7e-37 161.4 252 40.1
Duzib093G2051 Durio zibethinus HOM05D005945 ORTHO05D006749 6.3e-37 160.6 388 35.3
Solyc04g080200.4 Solanum lycopersicum HOM05D005945 ORTHO05D006749 6.3e-37 160.6 416 31.2
Os03g0594700 Oryza sativa ssp. japonica HOM05D005945 ORTHO05D006749 1.8e-36 159.1 303 37.6
PGSC0003DMG400005162 Solanum tuberosum HOM05D005945 ORTHO05D006749 1.8e-36 159.1 388 32.2
Manes.18G028200 Manihot esculenta HOM05D005945 ORTHO05D006749 4.1e-36 157.9 368 33.4
Medtr4g019490 Medicago truncatula HOM05D005945 ORTHO05D006749 7.0e-36 157.1 267 37.8
Dinv36067 Davidia involucrata HOM05D005945 ORTHO05D006749 1.2e-35 156.4 209 45.9
Lsat_1_v5_gn_1_17620 Lactuca sativa HOM05D005945 ORTHO05D006749 1.6e-35 156.0 276 37.7
Sabra14G0141200 Salix brachista HOM05D005945 ORTHO05D006749 1.6e-35 156.0 465 29.9
Phvul.010G012000 Phaseolus vulgaris HOM05D005945 ORTHO05D006749 4.5e-35 154.5 255 39.2
Hund26580 Selenicereus undatus HOM05D005945 ORTHO05D006749 4.5e-35 154.5 404 33.2
MD08G1033800 Malus domestica HOM05D005945 ORTHO05D006749 7.7e-35 153.7 386 33.4
arahy.Tifrunner.gnm1.ann1.Q0ZVI3 Arachis hypogaea HOM05D005945 ORTHO05D006749 1.3e-34 152.9 371 33.2
Cc10_g03040 Coffea canephora HOM05D005945 ORTHO05D006749 1.3e-34 152.9 405 29.6
HPP92_021270 Vanilla planifolia HOM05D005945 ORTHO05D006749 1.3e-34 152.9 260 38.1
Migut.C00710 Erythranthe guttata HOM05D005945 ORTHO05D006749 1.7e-34 152.5 255 38.8
Glyma.03G071500 Glycine max HOM05D005945 ORTHO05D006749 1.7e-34 152.5 253 39.9
MELO3C010931.2 Cucumis melo HOM05D005945 ORTHO05D006749 2.3e-34 152.1 237 41.4
THA.LOC104803244 Tarenaya hassleriana HOM05D005945 ORTHO05D006749 2.9e-34 151.8 283 37.8
HanXRQChr04g0105591 Helianthus annuus HOM05D005945 ORTHO05D006749 3.8e-34 151.4 270 37.4
CsaV3_2G028570 Cucumis sativus L. HOM05D005945 ORTHO05D006749 5.0e-34 151.0 237 40.9
FAN27G1966 Fragaria x ananassa HOM05D005945 ORTHO05D006749 5.0e-34 151.0 385 32.2
ECA247G0868 Erigeron canadensis HOM05D005945 ORTHO05D006749 6.6e-34 150.6 334 35.3
CANSAT25G3494 Cannabis sativa HOM05D005945 ORTHO05D006749 2.5e-33 148.7 395 30.9
Zm00001eb021170 Zea mays HOM05D005945 ORTHO05D006749 2.5e-33 148.7 260 38.8
Aqoxy4G01586 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 4.2e-33 147.9 296 38.9
DCAR_008766 Daucus carota HOM05D005945 ORTHO05D006749 5.5e-33 147.5 340 32.9
Sed0009733 Sechium edule HOM05D005945 ORTHO05D006749 1.2e-32 146.4 238 40.3
Zm00001eb404680 Zea mays HOM05D005945 ORTHO05D006749 1.2e-32 146.4 254 38.6
Lj3g0003314 Lotus japonicus HOM05D005945 ORTHO05D006749 1.6e-32 146.0 321 33.3
Glyma.01G104600 Glycine max HOM05D005945 ORTHO05D006749 2.1e-32 145.6 247 38.9
VMungo0331G0095 Vigna mungo HOM05D005945 ORTHO05D006749 2.8e-32 145.2 264 36.7
Atru.chr13.502 Acer truncatum HOM05D005945 ORTHO05D006749 3.6e-32 144.8 188 46.3
SGA_v2.0_scaffold326G48709 Striga asiatica HOM05D005945 ORTHO05D006749 3.6e-32 144.8 258 38.4
FvH4_2g39990 Fragaria vesca HOM05D005945 ORTHO05D006749 4.7e-32 144.4 387 31.0
TWI12G1232 Tripterygium wilfordii HOM05D005945 ORTHO05D006749 6.1e-32 144.1 246 37.4
FAN15G0837 Fragaria x ananassa HOM05D005945 ORTHO05D006749 8.0e-32 143.7 385 30.6
TPR.G32532 Trifolium pratense HOM05D005945 ORTHO05D006749 1.8e-31 142.5 343 32.1
FAN20G0334 Fragaria x ananassa HOM05D005945 ORTHO05D006749 3.0e-31 141.7 385 31.4
Ca_03064_v3 Cicer arietinum L. HOM05D005945 ORTHO05D006749 6.8e-31 140.6 384 32.3
ATR0618G067 Amborella trichopoda HOM05D005945 ORTHO05D006749 2.6e-30 138.7 163 49.1
ClCG08G015230 Citrullus lanatus HOM05D005945 ORTHO05D006749 7.5e-30 137.1 382 31.7
AT3G56870 Arabidopsis thaliana HOM05D005945 ORTHO05D006749 9.8e-30 136.7 281 32.7
arahy.Tifrunner.gnm1.ann1.01TKSZ Arachis hypogaea HOM05D005945 ORTHO05D006749 9.8e-30 136.7 404 30.4
Peaxi162Scf00690g00118 Petunia axillaris HOM05D005945 ORTHO05D006749 1.7e-29 136.0 398 29.4
PGR031G1506 Punica granatum HOM05D005945 ORTHO05D006749 4.9e-29 134.4 403 31.3
Ah.11g043130 Amaranthus hybridus HOM05D005945 ORTHO05D006749 8.3e-29 133.7 340 30.3
AL5G38260 Arabidopsis lyrata HOM05D005945 ORTHO05D006749 8.3e-29 133.7 277 33.2
EL10Ac1g01817 Beta vulgaris HOM05D005945 ORTHO05D006749 1.4e-28 132.9 414 29.2
HanXRQChr04g0105581 Helianthus annuus HOM05D005945 ORTHO05D006749 4.1e-28 131.3 378 30.2
Sp5g05720 Schrenkiella parvula HOM05D005945 ORTHO05D006749 9.2e-28 130.2 380 28.7
Oeu036192.1 Olea europaea HOM05D005945 ORTHO05D006749 1.6e-27 129.4 463 28.3
Carub.0005s2360 Capsella rubella HOM05D005945 ORTHO05D006749 2.3e-26 125.6 281 30.6
AUR62043686 Chenopodium quinoa HOM05D005945 ORTHO05D006749 2.3e-26 125.6 283 34.3
Thhalv10005811m.g Eutrema salsugineum HOM05D005945 ORTHO05D006749 2.3e-26 125.6 292 31.5
Aa31LG10G11720 Aethionema arabicum HOM05D005945 ORTHO05D006749 8.6e-26 123.6 291 31.6
BcaC07g39998 Brassica carinata HOM05D005945 ORTHO05D006749 8.6e-26 123.6 271 31.4
C08p32110 Brassica napus HOM05D005945 ORTHO05D006749 8.6e-26 123.6 271 31.4
Lalb_Chr19g0125071 Lupinus albus HOM05D005945 ORTHO05D006749 8.6e-26 123.6 190 42.1
AUR62038825 Chenopodium quinoa HOM05D005945 ORTHO05D006749 1.9e-25 122.5 227 39.2
Aqoxy4G01559 Aquilegia oxysepala HOM05D005945 ORTHO05D006749 4.3e-25 121.3 372 33.3
Lalb_Chr03g0042671 Lupinus albus HOM05D005945 ORTHO05D006749 4.3e-25 121.3 237 35.0
Sed0010063 Sechium edule HOM05D005945 ORTHO05D006749 4.3e-25 121.3 238 35.3
A09p49740 Brassica napus HOM05D005945 ORTHO05D006749 1.6e-24 119.4 271 31.4
BolC8t50829H Brassica oleracea HOM05D005945 ORTHO05D006749 1.6e-24 119.4 369 29.0
BraA09t40427Z Brassica rapa HOM05D005945 ORTHO05D006749 1.6e-24 119.4 271 31.4
MD15G1030400 Malus domestica HOM05D005945 ORTHO05D006749 2.1e-24 119.0 410 29.5
SEGI_34412 Sequoiadendron giganteum HOM05D057448 ORTHO05D006749 1.4e-23 116.3 165 43.0
CARHR167020 Cardamine hirsuta HOM05D005945 ORTHO05D006749 3.1e-23 115.2 415 28.9
BcaC07g40112 Brassica carinata HOM05D005945 ORTHO05D006749 5.2e-23 114.4 379 27.4
Lj2g0002553 Lotus japonicus HOM05D005945 ORTHO05D006749 3.4e-22 111.7 316 31.3
Gohir.D02G094500 Gossypium hirsutum HOM05D005945 ORTHO05D006749 5.8e-22 110.9 246 33.3
Gorai.005G107400 Gossypium raimondii HOM05D005945 ORTHO05D006749 2.9e-21 108.6 246 33.7
vmacro21631 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 2.9e-21 108.6 132 45.5
Actinidia22556 Actinidia chinensis HOM05D005945 ORTHO05D006749 2.4e-20 105.5 121 47.9
Rhsim06G0034700 Rhododendron simsii HOM05D005945 ORTHO05D006749 1.7e-18 99.4 412 27.7
Ah.05g167400 Amaranthus hybridus HOM05D005945 ORTHO05D006749 5.6e-17 94.4 321 30.5
vmacro21630 Vaccinium macrocarpon HOM05D005945 ORTHO05D006749 8.0e-16 90.5 175 38.9
TAR381G0602 Trochodendron aralioides HOM05D005945 ORTHO05D006749 1.5e-14 86.3 165 38.8
HPP92_021280 Vanilla planifolia HOM05D050438 ORTHO05D006749 2.6e-14 85.5 298 29.2
CDE02G0146 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 7.8e-11 73.9 154 34.4
Atru.chr13.504 Acer truncatum HOM05D005945 ORTHO05D006749 1.0e-10 73.6 373 25.2
AagrBONN_evm.TU.Sc2ySwM_344.3266 Anthoceros agrestis HOM05D005945 ORTHO05D006749 1.7e-10 72.8 171 30.4
CDE04G3738 Ceratophyllum demersum HOM05D060868 ORTHO05D006749 5.1e-10 71.2 73 46.6
Sc18g0006320 Simmondsia chinensis HOM05D005945 ORTHO05D006749 2.8e-08 65.5 385 23.9
SEGI_18222 Sequoiadendron giganteum HOM05D007138 ORTHO05D009148 2.3e-07 62.4 132 31.8


User provided reference genes

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