Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4161 Papaver somniferum HOM05D026995 ORTHO05D005585 6.0e-185 651.4 521 100.0
PSO675G3866 Papaver somniferum HOM05D026995 ORTHO05D005585 3.3e-143 512.7 610 65.6
PSO541G3520 Papaver somniferum HOM05D005129 ORTHO05D005585 2.6e-47 194.1 556 48.2
PSO541G0381 Papaver somniferum HOM05D026995 ORTHO05D005585 5.5e-37 159.8 446 52.5
PSO541G6300 Papaver somniferum HOM05D005129 ORTHO05D005585 3.0e-35 154.1 535 43.0
PSO675G2011 Papaver somniferum HOM05D026995 ORTHO05D005585 7.0e-24 116.3 74 78.4
PSO675G1291 Papaver somniferum HOM05D005129 ORTHO05D005585 5.5e-21 106.7 284 38.0
Lj1C1160T1 Lonicera japonica HOM05D005129 ORTHO05D005585 1.3e-14 85.5 348 29.9
Potri.001G463700 Populus trichocarpa HOM05D005129 ORTHO05D005585 3.8e-14 84.0 282 31.2
Potri.011G161901 Populus trichocarpa HOM05D005129 ORTHO05D005585 1.1e-13 82.4 250 32.8
TAR626G1389 Trochodendron aralioides HOM05D005129 ORTHO05D005585 3.6e-12 77.4 210 34.8
Nn1g08322 Nelumbo nucifera HOM05D005129 ORTHO05D005585 6.1e-12 76.6 208 34.6
MELO3C002837.2 Cucumis melo HOM05D005129 ORTHO05D005585 1.0e-11 75.9 264 33.0
TAR633G2434 Trochodendron aralioides HOM05D005129 ORTHO05D005585 1.0e-11 75.9 263 31.6
Aqoxy1G02020_Aqoxy1G02021 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 1.4e-11 75.5 271 33.2
Dinv27169 Davidia involucrata HOM05D005129 ORTHO05D005585 6.8e-11 73.2 203 33.0
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 1.5e-10 72.0 211 33.2
QL05p063822 Quercus lobata HOM05D005129 ORTHO05D005585 2.6e-10 71.2 203 33.5
Eucgr.D00092 Eucalyptus grandis HOM05D005129 ORTHO05D005585 3.4e-10 70.9 116 43.1
MBI18_g10016_MAGBIO Magnolia biondii HOM05D005129 ORTHO05D005585 4.4e-10 70.5 68 57.4
RcHm_v2.0_Chr5g0017511 Rosa chinensis HOM05D005129 ORTHO05D005585 4.4e-10 70.5 237 31.6
Rhsim13G0123000 Rhododendron simsii HOM05D005129 ORTHO05D005585 7.5e-10 69.7 97 44.3
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 7.5e-10 69.7 85 51.8
FAN25G2195 Fragaria x ananassa HOM05D005129 ORTHO05D005585 1.3e-09 68.9 277 29.6
arahy.Tifrunner.gnm1.ann1.40GDTE Arachis hypogaea HOM05D005129 ORTHO05D005585 2.2e-09 68.2 76 48.7
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 2.2e-09 68.2 67 49.3
GSVIVG01035592001 Vitis vinifera HOM05D005129 ORTHO05D005585 2.2e-09 68.2 126 42.1
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 3.7e-09 67.4 91 46.2
TWI63G1468 Tripterygium wilfordii HOM05D005129 ORTHO05D005585 3.7e-09 67.4 102 48.0
CAN.G39.32 Capsicum annuum HOM05D005129 ORTHO05D000007 4.9e-09 67.0 118 38.1
CDE06G2236 Ceratophyllum demersum HOM05D005129 ORTHO05D005585 4.9e-09 67.0 130 40.0
arahy.Tifrunner.gnm1.ann1.LUZ6WJ Arachis hypogaea HOM05D005129 ORTHO05D005585 6.3e-09 66.6 76 47.4
MD10G1247500 Malus domestica HOM05D005129 ORTHO05D005585 2.4e-08 64.7 170 35.3
Nitab4.5_0000076g0130 Nicotiana tabacum HOM05D005129 ORTHO05D005585 2.4e-08 64.7 59 57.6
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 2.4e-08 64.7 197 31.5
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 2.4e-08 64.7 250 30.0
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 3.1e-08 64.3 86 47.7
Sopen02g006450 Solanum pennellii HOM05D005129 ORTHO05D005585 3.1e-08 64.3 100 40.0
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 4.1e-08 63.9 94 47.9
FAN16G1113 Fragaria x ananassa HOM05D005129 ORTHO05D005585 4.1e-08 63.9 277 29.6
Psat1g165880 Pisum sativum HOM05D005129 ORTHO05D005585 4.1e-08 63.9 86 46.5
FAN11G1468 Fragaria x ananassa HOM05D005129 ORTHO05D005585 5.4e-08 63.5 102 42.2
Aqoxy7G00168 Aquilegia oxysepala HOM05D019791 ORTHO05D021351 7.0e-08 63.2 61 57.4
Nitab4.5_0002094g0030 Nicotiana tabacum HOM05D005129 ORTHO05D005585 7.0e-08 63.2 106 35.8
Sc19g0000270 Simmondsia chinensis HOM05D005129 ORTHO05D005585 7.0e-08 63.2 199 30.7
MD05G1268800 Malus domestica HOM05D005129 ORTHO05D005585 9.2e-08 62.8 170 34.1
Thecc.06G015200 Theobroma cacao HOM05D005129 ORTHO05D005585 1.2e-07 62.4 102 42.2
Solyc02g022870.4 Solanum lycopersicum HOM05D005129 ORTHO05D005585 1.6e-07 62.0 100 39.0
AUR62005921 Chenopodium quinoa HOM05D005129 ORTHO05D005585 3.5e-07 60.8 245 27.8
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 3.5e-07 60.8 223 32.7
Atru.chr3.3028 Acer truncatum HOM05D005129 ORTHO05D005585 4.5e-07 60.5 184 32.1
CANSAT35G1118 Cannabis sativa HOM05D005129 ORTHO05D005585 4.5e-07 60.5 86 50.0
Gohir.D05G113400 Gossypium hirsutum HOM05D005129 ORTHO05D005585 4.5e-07 60.5 112 38.4
FAN21G1521 Fragaria x ananassa HOM05D005129 ORTHO05D005585 5.9e-07 60.1 277 28.2
Ciclev10014031m.g Citrus clementina HOM05D005129 ORTHO05D005585 7.7e-07 59.7 67 47.8
Peaxi162Scf01909g00118 Petunia axillaris HOM05D005129 ORTHO05D005585 1.0e-06 59.3 59 52.5
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 1.3e-06 58.9 67 46.3
Cc09_g07500 Coffea canephora HOM05D005129 ORTHO05D005585 2.3e-06 58.2 61 49.2
Gohir.A05G112850 Gossypium hirsutum HOM05D005129 ORTHO05D005585 2.3e-06 58.2 112 38.4
Cpa.g.sc166.48 Carica papaya HOM05D005129 ORTHO05D005585 2.9e-06 57.8 63 46.0
HanXRQChr03g0080681 Helianthus annuus HOM05D005129 ORTHO05D005585 2.9e-06 57.8 254 28.3
Sopen07g020710 Solanum pennellii HOM05D005129 ORTHO05D005585 3.8e-06 57.4 100 36.0
Lsat_1_v5_gn_3_43520 Lactuca sativa HOM05D005129 ORTHO05D005585 5.0e-06 57.0 279 26.5


User provided reference genes

Program Settings