Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 4.3e-104 381.3 192 100.0
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.3e-73 280.0 191 70.7
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 2.1e-71 272.7 178 77.5
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 2.1e-71 272.7 189 73.0
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 4.8e-71 271.6 189 72.0
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 7.6e-69 264.2 181 72.4
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 1.3e-68 263.5 200 67.5
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 1.7e-68 263.1 178 73.6
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 2.5e-67 259.2 185 71.9
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.1e-66 256.1 187 69.0
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 3.5e-66 255.4 178 73.0
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 3.5e-66 255.4 183 68.9
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 4.6e-66 255.0 179 69.8
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 7.9e-66 254.2 179 71.5
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 1.3e-65 253.4 178 71.9
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 1.3e-65 253.4 184 70.1
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 1.8e-65 253.1 182 69.8
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 2.3e-65 252.7 183 70.5
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 3.0e-65 252.3 180 68.9
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 3.0e-65 252.3 179 72.1
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 3.0e-65 252.3 180 69.4
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 8.7e-65 250.8 179 71.5
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 8.7e-65 250.8 182 68.7
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.1e-64 250.4 181 69.1
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 1.1e-64 250.4 180 71.7
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 1.5e-64 250.0 179 68.7
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 2.5e-64 249.2 180 71.1
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 2.5e-64 249.2 179 71.5
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 3.3e-64 248.8 181 71.8
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.7e-64 248.1 179 70.4
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 5.7e-64 248.1 179 70.9
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 5.7e-64 248.1 183 67.8
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 9.7e-64 247.3 183 69.9
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.6e-63 246.5 180 69.4
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 2.2e-63 246.1 164 72.0
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 1.1e-62 243.8 172 69.8
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 1.4e-62 243.4 183 68.3
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 4.1e-62 241.9 184 67.9
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 4.1e-62 241.9 178 70.8
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 6.9e-62 241.1 184 67.9
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.2e-61 240.4 185 67.0
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.2e-61 240.4 164 71.3
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 2.0e-61 239.6 180 67.8
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 2.0e-61 239.6 174 67.8
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 3.4e-61 238.8 188 64.4
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 3.4e-61 238.8 179 67.0
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 5.9e-61 238.0 164 72.6
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 1.3e-60 236.9 161 70.2
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 1.3e-60 236.9 192 64.1
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 2.9e-60 235.7 183 65.6
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 8.5e-60 234.2 164 72.6
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 1.1e-59 233.8 175 65.7
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.4e-59 233.4 161 70.2
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 9.4e-59 230.7 173 65.3
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 1.6e-58 229.9 186 61.8
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 2.1e-58 229.6 177 64.4
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 2.1e-58 229.6 183 62.8
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 2.1e-58 229.6 183 62.3
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 2.7e-58 229.2 173 64.7
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 6.1e-58 228.0 181 65.7
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 1.4e-57 226.9 164 67.1
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 2.3e-57 226.1 172 66.3
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 3.0e-57 225.7 180 66.1
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 3.9e-57 225.3 188 59.6
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 5.1e-57 224.9 194 61.3
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 5.1e-57 224.9 183 66.1
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 1.5e-56 223.4 194 60.8
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.5e-56 222.6 174 63.8
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 5.3e-54 214.9 259 47.1
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.2e-53 213.8 185 56.8
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 1.5e-53 213.4 182 59.3
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 1.7e-52 209.9 183 59.6
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 2.2e-52 209.5 154 70.1
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.4e-51 206.8 144 71.5
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 1.4e-51 206.8 167 62.3
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 3.2e-51 205.7 171 60.2
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 3.2e-51 205.7 183 58.5
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 3.2e-51 205.7 164 62.8
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 7.2e-51 204.5 171 59.6
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 7.2e-51 204.5 167 61.7
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 7.2e-51 204.5 136 72.1
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 7.2e-51 204.5 162 63.6
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 1.6e-50 203.4 167 61.1
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 2.1e-50 203.0 167 61.1
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 4.7e-50 201.8 179 57.0
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 4.7e-50 201.8 143 69.9
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 4.7e-50 201.8 132 76.5
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 6.1e-50 201.4 182 56.6
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 2.3e-49 199.5 136 74.3
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.3e-49 199.5 167 61.7
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 8.8e-49 197.6 170 58.2
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 3.6e-42 175.6 136 67.6
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 4.7e-42 175.3 189 52.4
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 2.3e-41 172.9 191 49.7
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 8.2e-39 164.5 161 55.3
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.1e-38 164.1 194 48.5
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.1e-38 162.5 168 51.2
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 9.1e-38 161.0 174 52.9
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 1.5e-35 153.7 129 61.2
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 5.0e-28 128.6 183 42.6
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.0e-25 120.9 100 62.0
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 4.0e-25 119.0 84 66.7
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 5.7e-24 115.2 120 47.5
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.7e-23 113.6 174 43.7
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.4e-22 110.5 87 63.2
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 2.3e-20 103.2 198 36.9
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 2.3e-20 103.2 74 67.6
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 3.8e-20 102.4 73 65.8
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 5.5e-19 98.6 138 39.9
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 2.4e-14 83.2 61 65.6
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.3e-09 66.6 68 51.5
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 8.3e-07 58.2 40 72.5
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 5.4e-06 55.5 45 57.8


User provided reference genes

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