Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4136 Papaver somniferum HOM05D006144 ORTHO05D006357 0.0e+00 1727.2 890 100.0
PSO675G0817 Papaver somniferum HOM05D006144 ORTHO05D006357 0.0e+00 1617.1 921 91.2
TAR381G1042 Trochodendron aralioides HOM05D006144 ORTHO05D006357 1.2e-164 584.7 717 51.0
Nn5g30196 Nelumbo nucifera HOM05D006144 ORTHO05D006357 3.7e-150 536.6 729 46.6
Aqoxy6G01406 Aquilegia oxysepala HOM05D006144 ORTHO05D006357 4.2e-146 523.1 705 46.1
Atru.chr3.396 Acer truncatum HOM05D006144 ORTHO05D006357 1.5e-143 514.6 732 44.4
MD15G1281500 Malus domestica HOM05D006144 ORTHO05D006357 2.6e-143 513.8 724 44.2
MD02G1169100 Malus domestica HOM05D006144 ORTHO05D006357 4.5e-140 503.1 710 45.1
CiPaw.01G021400 Carya illinoinensis HOM05D006144 ORTHO05D006357 3.8e-139 500.0 716 43.3
Prupe.7G136200 Prunus persica HOM05D006144 ORTHO05D006357 1.6e-137 494.6 705 43.7
GSVIVG01002633001 Vitis vinifera HOM05D006144 ORTHO05D006357 8.8e-136 488.8 720 44.4
Duzib147G1467 Durio zibethinus HOM05D006144 ORTHO05D006357 2.2e-134 484.2 702 44.0
QL06p042250 Quercus lobata HOM05D006144 ORTHO05D006357 6.3e-134 482.6 720 43.3
Potri.007G041300 Populus trichocarpa HOM05D006144 ORTHO05D006357 1.1e-133 481.9 731 43.0
Haze_15426 Corylus avellana HOM05D006144 ORTHO05D006357 5.4e-133 479.6 704 43.5
Potri.005G136600 Populus trichocarpa HOM05D006144 ORTHO05D006357 4.5e-132 476.5 709 43.2
CSS0009151 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 1.3e-131 474.9 718 43.9
Gohir.A11G046100 Gossypium hirsutum HOM05D006144 ORTHO05D006357 1.3e-131 474.9 692 42.9
COL.COLO4_22183 Corchorus olitorius HOM05D006144 ORTHO05D006357 2.3e-131 474.2 694 44.2
CSS0011451 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 3.8e-131 473.4 712 44.1
Cfa003998 Carpinus fangiana HOM05D006144 ORTHO05D006357 1.5e-130 471.5 725 42.8
Ciclev10024721m.g Citrus clementina HOM05D006144 ORTHO05D006357 4.2e-130 469.9 715 42.1
Nn1g05861 Nelumbo nucifera HOM05D006144 ORTHO05D006357 4.2e-130 469.9 730 43.8
FAN28G0789 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.2e-129 468.4 731 42.3
CSS0044544 Camellia sinensis var. sinensis HOM05D006144 ORTHO05D006357 8.0e-129 465.7 733 41.2
Gorai.007G053500 Gossypium raimondii HOM05D006144 ORTHO05D006357 2.3e-128 464.2 700 42.1
FAN23G0857 Fragaria x ananassa HOM05D006144 ORTHO05D006357 4.0e-128 463.4 736 41.6
Gohir.D11G049700 Gossypium hirsutum HOM05D006144 ORTHO05D006357 5.2e-128 463.0 698 42.0
FAN26G0177 Fragaria x ananassa HOM05D006144 ORTHO05D006357 8.9e-128 462.2 732 41.3
RcHm_v2.0_Chr2g0105021 Rosa chinensis HOM05D006144 ORTHO05D006357 4.4e-127 459.9 731 41.3
Thecc.01G052700 Theobroma cacao HOM05D006144 ORTHO05D006357 4.9e-126 456.4 703 42.0
FAN19G3143 Fragaria x ananassa HOM05D006144 ORTHO05D006357 1.4e-125 454.9 712 42.3
Actinidia36503 Actinidia chinensis HOM05D006144 ORTHO05D006357 7.0e-125 452.6 712 41.6
FvH4_1g15710 Fragaria vesca HOM05D006144 ORTHO05D006357 4.5e-124 449.9 736 41.6
CANSAT01G0270 Cannabis sativa HOM05D006144 ORTHO05D006357 6.1e-121 439.5 717 42.7
Manes.12G100500 Manihot esculenta HOM05D006144 ORTHO05D006357 6.1e-121 439.5 713 41.1
Actinidia12060 Actinidia chinensis HOM05D006144 ORTHO05D006357 8.0e-121 439.1 713 41.5
vmacro05326 Vaccinium macrocarpon HOM05D006144 ORTHO05D006357 3.0e-120 437.2 701 41.1
TWI09G0039 Tripterygium wilfordii HOM05D006144 ORTHO05D006357 4.0e-120 436.8 709 39.8
Lj4C140T7 Lonicera japonica HOM05D006144 ORTHO05D006357 1.1e-117 428.7 695 41.7
MBI06_g08189_MAGBIO Magnolia biondii HOM05D006144 ORTHO05D006357 1.1e-117 428.7 721 42.6
Cpa.g.sc55.182 Carica papaya HOM05D006144 ORTHO05D006357 2.4e-117 427.6 699 40.2
MELO3C007550.2 Cucumis melo HOM05D006144 ORTHO05D006357 5.4e-117 426.4 700 41.7
CsaV3_6G043130 Cucumis sativus L. HOM05D006144 ORTHO05D006357 4.6e-116 423.3 710 40.8
Cc07_g05860 Coffea canephora HOM05D006144 ORTHO05D006357 1.5e-114 418.3 735 41.0
Nitab4.5_0001684g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 2.0e-111 407.9 710 38.3
Sabra07G0036900 Salix brachista HOM05D006144 ORTHO05D006357 2.0e-111 407.9 700 39.4
Nitab4.5_0000382g0030 Nicotiana tabacum HOM05D006144 ORTHO05D006357 5.8e-111 406.4 710 38.3
ClCG01G016710 Citrullus lanatus HOM05D006144 ORTHO05D006357 9.8e-111 405.6 710 40.6
Solyc03g044620.4 Solanum lycopersicum HOM05D006144 ORTHO05D006357 6.0e-108 396.4 717 37.7
Hma1.2p1_0200F.1_g086100 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 7.8e-108 396.0 722 40.0
Oeu003786.1 Olea europaea HOM05D006144 ORTHO05D006357 1.3e-107 395.2 732 37.3
Oeu004869.1 Olea europaea HOM05D006144 ORTHO05D006357 1.3e-107 395.2 721 39.1
Rhsim10G0119800 Rhododendron simsii HOM05D006144 ORTHO05D006357 1.3e-107 395.2 612 43.5
Sed0018548 Sechium edule HOM05D006144 ORTHO05D006357 1.3e-107 395.2 708 40.1
Eucgr.H01999 Eucalyptus grandis HOM05D006144 ORTHO05D006357 4.3e-106 390.2 700 40.7
DCAR_025720 Daucus carota HOM05D006144 ORTHO05D006357 5.6e-106 389.8 721 39.7
Hund13563 Selenicereus undatus HOM05D006144 ORTHO05D006357 5.6e-106 389.8 702 40.2
Migut.H00451 Erythranthe guttata HOM05D006144 ORTHO05D006357 8.1e-105 386.0 694 38.5
PGSC0003DMG400019754 Solanum tuberosum HOM05D006144 ORTHO05D006357 2.3e-104 384.4 713 36.7
Glyma.01G184700 Glycine max HOM05D006144 ORTHO05D006357 4.0e-104 383.6 700 38.3
CAN.G11.1 Capsicum annuum HOM05D006144 ORTHO05D006357 2.6e-103 380.9 717 36.5
Oeu049306.1 Olea europaea HOM05D006144 ORTHO05D006357 2.2e-102 377.9 704 37.5
arahy.Tifrunner.gnm1.ann1.IY5EPV Arachis hypogaea HOM05D006144 ORTHO05D006357 1.4e-101 375.2 746 37.0
Peaxi162Scf00183g00711 Petunia axillaris HOM05D006144 ORTHO05D006357 1.4e-101 375.2 715 36.6
arahy.Tifrunner.gnm1.ann1.AH11HU Arachis hypogaea HOM05D006144 ORTHO05D006357 1.3e-99 368.6 738 37.3
Dinv39873 Davidia involucrata HOM05D006144 ORTHO05D006357 1.7e-99 368.2 687 38.1
Sopen03g008900 Solanum pennellii HOM05D006144 ORTHO05D006357 3.9e-99 367.1 717 36.3
PGR102G0121 Punica granatum HOM05D006144 ORTHO05D006357 5.1e-99 366.7 712 37.2
MSTRG.2895 Avicennia marina HOM05D006144 ORTHO05D006357 1.9e-98 364.8 706 38.2
Glyma.11G057500 Glycine max HOM05D006144 ORTHO05D006357 1.2e-97 362.1 711 36.0
Lalb_Chr16g0388301 Lupinus albus HOM05D006144 ORTHO05D006357 6.2e-97 359.8 702 36.5
Phvul.002G020300 Phaseolus vulgaris HOM05D006144 ORTHO05D006357 4.4e-95 353.6 700 36.1
Ca_24781_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 9.9e-95 352.4 697 37.9
Sc03g0001430 Simmondsia chinensis HOM05D006144 ORTHO05D006357 2.2e-94 351.3 696 37.9
TPR.G31101 Trifolium pratense HOM05D006144 ORTHO05D006357 3.8e-94 350.5 701 37.5
Lj2g0024358 Lotus japonicus HOM05D006144 ORTHO05D006357 1.2e-92 345.5 716 36.3
VMungo1215G0092 Vigna mungo HOM05D006144 ORTHO05D006357 2.7e-92 344.4 699 37.3
Psat0s3889g0080 Pisum sativum HOM05D006144 ORTHO05D006357 3.3e-90 337.4 700 36.4
HPP92_004081 Vanilla planifolia HOM05D006144 ORTHO05D006357 8.1e-89 332.8 718 37.3
EL10Ac6g15152 Beta vulgaris HOM05D006144 ORTHO05D006357 1.8e-88 331.6 727 36.0
SGA_v2.0_scaffold204G41590 Striga asiatica HOM05D006144 ORTHO05D006357 1.3e-86 325.5 707 34.9
THA.LOC104804508 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 1.9e-85 321.6 714 35.7
THA.LOC104826201 Tarenaya hassleriana HOM05D006144 ORTHO05D006357 1.9e-85 321.6 714 35.7
ATR0104G015 Amborella trichopoda HOM05D006144 ORTHO05D006357 6.0e-84 316.6 706 34.8
Lalb_Chr09g0333701 Lupinus albus HOM05D006144 ORTHO05D006357 1.1e-82 312.4 705 35.0
AUR62003855 Chenopodium quinoa HOM05D006144 ORTHO05D006357 1.6e-81 308.5 698 35.1
Ca_22186_v3 Cicer arietinum L. HOM05D006144 ORTHO05D006357 1.7e-78 298.5 702 34.6
Os03g0186500 Oryza sativa ssp. japonica HOM05D006144 ORTHO05D006357 4.9e-78 297.0 693 36.1
MSTRG.23764 Avicennia marina HOM05D006144 ORTHO05D006357 2.4e-77 294.7 760 35.9
Ah.03g144510 Amaranthus hybridus HOM05D006144 ORTHO05D006357 1.3e-75 288.9 709 33.4
Zm00001eb006470 Zea mays HOM05D006144 ORTHO05D006357 3.0e-75 287.7 709 33.0
AUR62001952 Chenopodium quinoa HOM05D006144 ORTHO05D006357 5.8e-71 273.5 588 35.2
Psat4g089200 Pisum sativum HOM05D006144 ORTHO05D006357 2.9e-70 271.2 693 32.6
TPR.G640 Trifolium pratense HOM05D006144 ORTHO05D006357 3.8e-70 270.8 319 47.0
CDE03G0440 Ceratophyllum demersum HOM05D006144 ORTHO05D006357 1.1e-69 269.2 707 32.4
unitig_736.g22372 Utricularia gibba HOM05D006144 ORTHO05D006357 6.0e-68 263.5 684 33.6
HanXRQChr14g0430551 Helianthus annuus HOM05D006144 ORTHO05D006357 6.7e-67 260.0 334 45.2
ECA232G0891 Erigeron canadensis HOM05D006144 ORTHO05D006357 2.1e-65 255.0 533 35.8
Dinv29969 Davidia involucrata HOM05D006144 ORTHO05D006357 1.0e-62 246.1 588 35.0
Lsat_1_v5_gn_4_167780 Lactuca sativa HOM05D006144 ORTHO05D006357 2.0e-55 221.9 323 40.9
Hma1.2p1_1415F.1_g282000 Hydrangea macrophylla HOM05D006144 ORTHO05D006357 5.0e-54 217.2 681 31.0
SEGI_17223 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 6.7e-51 206.8 349 36.4
HPP92_004109 Vanilla planifolia HOM05D006144 ORTHO05D006357 5.0e-30 137.5 156 46.2
Mapoly0063s0038 Marchantia polymorpha HOM05D006144 ORTHO05D006357 3.2e-29 134.8 370 27.0
Mapoly0063s0034 Marchantia polymorpha HOM05D006144 ORTHO05D006357 5.2e-27 127.5 379 28.5
AUR62039591 Chenopodium quinoa HOM05D006144 ORTHO05D006357 6.7e-27 127.1 284 32.7
Aa31LG1G15380 Aethionema arabicum HOM05D012861 ORTHO05D006357 5.9e-23 114.0 573 26.4
AUR62013383 Chenopodium quinoa HOM05D006144 ORTHO05D006017 2.2e-22 112.1 264 32.2
SMO301G0037 Selaginella moellendorffii HOM05D006144 ORTHO05D006357 7.2e-21 107.1 361 24.1
TAR381G0606 Trochodendron aralioides HOM05D006144 ORTHO05D006357 4.0e-19 101.3 247 31.2
Dinv29968 Davidia involucrata HOM05D000370 ORTHO05D001366 1.7e-17 95.9 119 47.1
AT5G66820 Arabidopsis thaliana HOM05D012861 ORTHO05D006357 9.1e-16 90.1 561 26.7
Lj4A140T30 Lonicera japonica HOM05D006144 ORTHO05D006357 6.8e-11 73.9 213 28.6
AagrBONN_evm.TU.Sc2ySwM_228.442 Anthoceros agrestis HOM05D006144 ORTHO05D006357 2.0e-10 72.4 276 24.3
Sp2g29830 Schrenkiella parvula HOM05D012861 ORTHO05D006357 9.8e-10 70.1 242 28.9
SEGI_01818 Sequoiadendron giganteum HOM05D006144 ORTHO05D006357 2.8e-09 68.6 90 40.0
Thhalv10004001m.g Eutrema salsugineum HOM05D012861 ORTHO05D006357 6.3e-09 67.4 238 26.5
Carub.0008s2766 Capsella rubella HOM05D012861 ORTHO05D006357 5.4e-08 64.3 562 25.1
Sabra05G0109100 Salix brachista HOM05D006144 ORTHO05D006357 5.4e-08 64.3 59 54.2
CARHR280840 Cardamine hirsuta HOM05D012861 ORTHO05D006357 9.2e-08 63.5 165 29.7
AL8G44580 Arabidopsis lyrata HOM05D012861 ORTHO05D006357 5.9e-07 60.8 190 28.4
A07p17060 Brassica napus HOM05D012861 ORTHO05D006357 1.0e-06 60.1 503 26.0
BraA07t29433Z Brassica rapa HOM05D012861 ORTHO05D006357 1.0e-06 60.1 503 26.0
C07p24920 Brassica napus HOM05D012861 ORTHO05D006357 1.7e-06 59.3 523 26.2


User provided reference genes

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