Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4117 Papaver somniferum HOM05D003630 ORTHO05D004151 9.7e-62 240.0 121 100.0
PSO675G3190 Papaver somniferum HOM05D003630 ORTHO05D004151 2.6e-54 215.3 121 91.7
Dinv17335 Davidia involucrata HOM05D003630 ORTHO05D004151 1.0e-31 140.2 134 61.9
Hma1.2p1_0208F.1_g088370 Hydrangea macrophylla HOM05D003630 ORTHO05D004151 5.2e-31 137.9 134 64.2
SalBow8G2511 Salvia bowleyana HOM05D003630 ORTHO05D004151 4.9e-29 131.3 124 58.9
TWI38G1513 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 4.9e-29 131.3 127 59.1
CSS0035295 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 1.1e-28 130.2 123 60.2
Gohir.A05G159800 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.1e-28 130.2 131 55.7
Gohir.D05G162500 Gossypium hirsutum HOM05D003630 ORTHO05D004151 1.1e-28 130.2 131 56.5
Aqoxy1G02347 Aquilegia oxysepala HOM05D003630 ORTHO05D004151 1.4e-28 129.8 130 57.7
ATR0752G193 Amborella trichopoda HOM05D003630 ORTHO05D004151 1.8e-28 129.4 132 62.1
Cpa.g.sc373.3 Carica papaya HOM05D003630 ORTHO05D004151 2.4e-28 129.0 130 62.3
PGR004G0839 Punica granatum HOM05D003630 ORTHO05D004151 1.6e-27 126.3 132 59.8
TAR626G1897 Trochodendron aralioides HOM05D003630 ORTHO05D004151 2.0e-27 125.9 129 62.8
Actinidia07592 Actinidia chinensis HOM05D003630 ORTHO05D004151 2.7e-27 125.6 124 59.7
CANSAT35G1140 Cannabis sativa HOM05D003630 ORTHO05D004151 3.5e-27 125.2 128 51.6
Duzib160G0312 Durio zibethinus HOM05D003630 ORTHO05D004151 3.5e-27 125.2 127 58.3
Solyc02g077880.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 3.5e-27 125.2 129 57.4
Sopen02g022730 Solanum pennellii HOM05D003630 ORTHO05D004151 3.5e-27 125.2 129 57.4
PGSC0003DMG400029732 Solanum tuberosum HOM05D003630 ORTHO05D004151 3.5e-27 125.2 130 55.4
Nitab4.5_0000516g0130 Nicotiana tabacum HOM05D003630 ORTHO05D004151 4.6e-27 124.8 125 58.4
CiPaw.10G051200 Carya illinoinensis HOM05D003630 ORTHO05D004151 5.9e-27 124.4 130 53.1
Lj6g0013661 Lotus japonicus HOM05D003630 ORTHO05D004151 5.9e-27 124.4 123 61.0
Oeu029367.1 Olea europaea HOM05D003630 ORTHO05D004151 5.9e-27 124.4 127 60.6
Cc02_g13650 Coffea canephora HOM05D003630 ORTHO05D004151 7.8e-27 124.0 132 56.8
PGSC0003DMG400012826 Solanum tuberosum HOM05D003630 ORTHO05D004151 1.0e-26 123.6 129 57.4
vmacro15923 Vaccinium macrocarpon HOM05D003630 ORTHO05D004151 1.0e-26 123.6 130 53.8
Migut.M01120 Erythranthe guttata HOM05D003630 ORTHO05D004151 3.0e-26 122.1 132 53.0
Manes.17G047900 Manihot esculenta HOM05D003630 ORTHO05D004151 3.0e-26 122.1 122 57.4
Nn1g04163 Nelumbo nucifera HOM05D003630 ORTHO05D004151 3.0e-26 122.1 128 60.2
Lalb_Chr15g0089711 Lupinus albus HOM05D003630 ORTHO05D004151 3.9e-26 121.7 122 58.2
TAR624G0603 Trochodendron aralioides HOM05D003630 ORTHO05D004151 6.6e-26 120.9 128 53.9
Carub.0001s2678 Capsella rubella HOM05D003630 ORTHO05D004151 8.6e-26 120.6 130 57.7
VMungo0540G1118 Vigna mungo HOM05D003630 ORTHO05D004151 8.6e-26 120.6 124 59.7
CiPaw.09G062300 Carya illinoinensis HOM05D003630 ORTHO05D004151 1.1e-25 120.2 129 58.9
Phvul.006G183600 Phaseolus vulgaris HOM05D003630 ORTHO05D004151 1.1e-25 120.2 124 58.9
HPP92_018480 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.5e-25 119.8 133 54.9
HPP92_018482 Vanilla planifolia HOM05D003630 ORTHO05D004151 1.5e-25 119.8 133 54.9
arahy.Tifrunner.gnm1.ann1.H8XLFU Arachis hypogaea HOM05D003630 ORTHO05D004151 1.9e-25 119.4 123 56.9
arahy.Tifrunner.gnm1.ann1.S1G93A Arachis hypogaea HOM05D003630 ORTHO05D004151 1.9e-25 119.4 123 56.9
QL05p041782 Quercus lobata HOM05D003630 ORTHO05D004151 1.9e-25 119.4 132 56.1
CDE11G0243 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 3.3e-25 118.6 128 57.8
ClCG03G008090 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.3e-25 118.6 120 55.0
Gohir.A06G129700 Gossypium hirsutum HOM05D003630 ORTHO05D004151 4.3e-25 118.2 121 56.2
Gohir.D06G133900 Gossypium hirsutum HOM05D003630 ORTHO05D004151 4.3e-25 118.2 121 56.2
AUR62017046 Chenopodium quinoa HOM05D003630 ORTHO05D004151 5.6e-25 117.9 124 58.9
Ah.09g237490 Amaranthus hybridus HOM05D003630 ORTHO05D004151 9.5e-25 117.1 127 54.3
Nitab4.5_0003487g0100 Nicotiana tabacum HOM05D003630 ORTHO05D004151 9.5e-25 117.1 126 52.4
Migut.H01476 Erythranthe guttata HOM05D003630 ORTHO05D004151 1.6e-24 116.3 128 54.7
MBI02_g32444_MAGBIO Magnolia biondii HOM05D003630 ORTHO05D004151 1.6e-24 116.3 129 55.8
GSVIVG01021092001 Vitis vinifera HOM05D003630 ORTHO05D004151 1.6e-24 116.3 129 57.4
Lalb_Chr18g0059451 Lupinus albus HOM05D003630 ORTHO05D004151 2.1e-24 115.9 125 56.8
Oeu012144.1 Olea europaea HOM05D003630 ORTHO05D004151 2.1e-24 115.9 130 54.6
SGA_v2.0_scaffold100G29703 Striga asiatica HOM05D003630 ORTHO05D004151 2.1e-24 115.9 129 57.4
AUR62014851 Chenopodium quinoa HOM05D003630 ORTHO05D004151 2.8e-24 115.5 124 58.9
MELO3C002620.2 Cucumis melo HOM05D003630 ORTHO05D004151 2.8e-24 115.5 121 52.1
unitig_749.g13657 Utricularia gibba HOM05D003630 ORTHO05D004151 2.8e-24 115.5 131 50.4
ClCG01G023140 Citrullus lanatus HOM05D003630 ORTHO05D004151 3.6e-24 115.2 128 56.2
Sed0024812 Sechium edule HOM05D003630 ORTHO05D004151 3.6e-24 115.2 128 56.2
arahy.Tifrunner.gnm1.ann1.Q5B35H Arachis hypogaea HOM05D003630 ORTHO05D004151 4.7e-24 114.8 125 52.8
BcaB07g32449 Brassica carinata HOM05D003630 ORTHO05D004151 4.7e-24 114.8 128 57.8
CsaV3_1G012460 Cucumis sativus L. HOM05D003630 ORTHO05D004151 4.7e-24 114.8 121 52.1
Glyma.13G237000 Glycine max HOM05D003630 ORTHO05D004151 6.2e-24 114.4 121 53.7
MSTRG.13203 Avicennia marina HOM05D003630 ORTHO05D004151 8.0e-24 114.0 123 52.0
ECA236G4733 Erigeron canadensis HOM05D003630 ORTHO05D004151 8.0e-24 114.0 131 58.0
Peaxi162Scf01100g00009 Petunia axillaris HOM05D003630 ORTHO05D004151 1.0e-23 113.6 126 56.3
Solyc03g006360.3 Solanum lycopersicum HOM05D003630 ORTHO05D004151 1.0e-23 113.6 131 56.5
CsaV3_6G050280 Cucumis sativus L. HOM05D003630 ORTHO05D004151 1.4e-23 113.2 128 54.7
Prupe.4G050800 Prunus persica HOM05D003630 ORTHO05D004151 1.4e-23 113.2 128 54.7
Sed0001316 Sechium edule HOM05D003630 ORTHO05D004151 1.4e-23 113.2 121 47.9
FvH4_3g08830 Fragaria vesca HOM05D003630 ORTHO05D004151 1.8e-23 112.8 126 54.0
FAN11G3953 Fragaria x ananassa HOM05D003630 ORTHO05D004151 1.8e-23 112.8 126 54.0
Sed0017838 Sechium edule HOM05D003630 ORTHO05D004151 1.8e-23 112.8 130 52.3
BcaC05g26841 Brassica carinata HOM05D003630 ORTHO05D004151 2.3e-23 112.5 128 57.0
PGR042G3375 Punica granatum HOM05D003630 ORTHO05D004151 2.3e-23 112.5 129 57.4
DCAR_003387 Daucus carota HOM05D003630 ORTHO05D004151 3.1e-23 112.1 125 52.8
FAN16G2355 Fragaria x ananassa HOM05D003630 ORTHO05D004151 3.1e-23 112.1 126 54.0
FAN21G0750 Fragaria x ananassa HOM05D003630 ORTHO05D004151 3.1e-23 112.1 126 54.0
FAN25G0655 Fragaria x ananassa HOM05D003630 ORTHO05D004151 3.1e-23 112.1 126 54.0
HPP92_014190 Vanilla planifolia HOM05D003630 ORTHO05D004151 3.1e-23 112.1 127 48.0
RcHm_v2.0_Chr5g0008921 Rosa chinensis HOM05D003630 ORTHO05D004151 4.0e-23 111.7 127 52.8
Thhalv10009086m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 6.8e-23 110.9 131 55.7
CSS0033873 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 8.9e-23 110.5 115 55.7
Oeu056100.2 Olea europaea HOM05D003630 ORTHO05D004151 8.9e-23 110.5 130 53.1
Thecc.06G183500 Theobroma cacao HOM05D003630 ORTHO05D004151 8.9e-23 110.5 114 57.9
EL10Ac8g20421 Beta vulgaris HOM05D003630 ORTHO05D004151 1.2e-22 110.2 130 54.6
Glyma.15G076500 Glycine max HOM05D003630 ORTHO05D004151 1.5e-22 109.8 121 54.5
Lalb_Chr09g0327781 Lupinus albus HOM05D003630 ORTHO05D004151 1.5e-22 109.8 127 50.4
Potri.004G047100 Populus trichocarpa HOM05D003630 ORTHO05D004151 1.5e-22 109.8 119 58.0
Aa31sc86G60 Aethionema arabicum HOM05D003630 ORTHO05D004151 2.0e-22 109.4 117 53.8
CSS0037340 Camellia sinensis var. sinensis HOM05D003630 ORTHO05D004151 2.6e-22 109.0 115 53.0
arahy.Tifrunner.gnm1.ann1.RY2Y1Z Arachis hypogaea HOM05D003630 ORTHO05D004151 3.4e-22 108.6 125 51.2
CDE05G2086 Ceratophyllum demersum HOM05D003630 ORTHO05D004151 3.4e-22 108.6 127 51.2
THA.LOC104814224 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 3.4e-22 108.6 118 55.9
TWI38G1867 Tripterygium wilfordii HOM05D003630 ORTHO05D004151 3.4e-22 108.6 113 56.6
Medtr2g014240 Medicago truncatula HOM05D003630 ORTHO05D004151 4.4e-22 108.2 125 57.6
A05p11750 Brassica napus HOM05D003630 ORTHO05D004151 7.5e-22 107.5 125 48.8
BraA05t20119Z Brassica rapa HOM05D003630 ORTHO05D004151 7.5e-22 107.5 125 48.8
CARHR127940 Cardamine hirsuta HOM05D003630 ORTHO05D004151 7.5e-22 107.5 124 47.6
CiPaw.04G030300 Carya illinoinensis HOM05D003630 ORTHO05D004151 7.5e-22 107.5 116 57.8
MSTRG.15866 Avicennia marina HOM05D003630 ORTHO05D004151 9.8e-22 107.1 131 55.7
Ca_00350_v3 Cicer arietinum L. HOM05D003630 ORTHO05D004151 9.8e-22 107.1 121 55.4
Rhsim02G0132700 Rhododendron simsii HOM05D003630 ORTHO05D004151 9.8e-22 107.1 113 53.1
Dinv40586 Davidia involucrata HOM05D003630 ORTHO05D004151 1.3e-21 106.7 115 54.8
BcaB02g10597 Brassica carinata HOM05D003630 ORTHO05D004151 2.2e-21 105.9 125 48.8
AT2G33830 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 2.9e-21 105.5 123 50.4
Os11g0671000 Oryza sativa ssp. japonica HOM05D003630 ORTHO05D004151 2.9e-21 105.5 129 50.4
Duzib235G1039 Durio zibethinus HOM05D003630 ORTHO05D004151 3.7e-21 105.1 128 52.3
Sp4g16220 Schrenkiella parvula HOM05D003630 ORTHO05D004151 3.7e-21 105.1 125 49.6
AT1G28330 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 4.9e-21 104.8 118 56.8
C04p15210 Brassica napus HOM05D003630 ORTHO05D004151 4.9e-21 104.8 125 48.0
BolC4t23094H Brassica oleracea HOM05D003630 ORTHO05D004151 4.9e-21 104.8 125 48.0
Manes.16G030000 Manihot esculenta HOM05D003630 ORTHO05D004151 4.9e-21 104.8 111 55.9
THA.LOC104812301 Tarenaya hassleriana HOM05D003630 ORTHO05D004151 6.4e-21 104.4 124 54.8
BcaC02g11461 Brassica carinata HOM05D003630 ORTHO05D004151 1.1e-20 103.6 125 48.0
TPR.G16501 Trifolium pratense HOM05D003630 ORTHO05D004151 1.1e-20 103.6 125 55.2
Sc24g0001020 Simmondsia chinensis HOM05D003630 ORTHO05D004151 1.4e-20 103.2 116 54.3
AL4G29600 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 2.4e-20 102.4 121 47.1
A03p18920 Brassica napus HOM05D003630 ORTHO05D004151 2.4e-20 102.4 127 47.2
AL1G41920 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 3.2e-20 102.1 128 53.1
BraA02t07868Z Brassica rapa HOM05D003630 ORTHO05D004151 3.2e-20 102.1 128 46.9
Carub.0004s1550 Capsella rubella HOM05D003630 ORTHO05D004151 3.2e-20 102.1 125 48.0
C02p44910 Brassica napus HOM05D003630 ORTHO05D004151 4.1e-20 101.7 128 46.9
BolC2t10526H Brassica oleracea HOM05D003630 ORTHO05D004151 4.1e-20 101.7 128 46.9
BcaB01g03917 Brassica carinata HOM05D003630 ORTHO05D004151 5.4e-20 101.3 125 48.0
BcaC01g05821 Brassica carinata HOM05D003630 ORTHO05D004151 5.4e-20 101.3 125 48.0
BcaC01g05822 Brassica carinata HOM05D003630 ORTHO05D004151 5.4e-20 101.3 125 48.0
BraA03t11151Z Brassica rapa HOM05D003630 ORTHO05D004151 5.4e-20 101.3 125 48.0
MELO3C007269.2 Cucumis melo HOM05D003630 ORTHO05D004151 5.4e-20 101.3 115 55.7
Sp1g24570 Schrenkiella parvula HOM05D003630 ORTHO05D004151 5.4e-20 101.3 128 53.1
A02p28330 Brassica napus HOM05D003630 ORTHO05D004151 7.0e-20 100.9 123 48.0
A09p37730 Brassica napus HOM05D003630 ORTHO05D004151 9.2e-20 100.5 125 54.4
C05p27220 Brassica napus HOM05D003630 ORTHO05D004151 9.2e-20 100.5 125 54.4
BolC3t14590H Brassica oleracea HOM05D003630 ORTHO05D004151 9.2e-20 100.5 125 47.2
BraA09t39285Z Brassica rapa HOM05D003630 ORTHO05D004151 9.2e-20 100.5 125 54.4
Gorai.009G167500 Gossypium raimondii HOM05D003630 ORTHO05D004151 9.2e-20 100.5 111 51.4
SEGI_31386 Sequoiadendron giganteum HOM05D003630 ORTHO05D004151 9.2e-20 100.5 139 46.0
Ciclev10017162m.g Citrus clementina HOM05D003630 ORTHO05D004151 2.0e-19 99.4 116 54.3
Gorai.010G155600 Gossypium raimondii HOM05D003630 ORTHO05D004151 2.0e-19 99.4 108 53.7
CARHR027820 Cardamine hirsuta HOM05D003630 ORTHO05D004151 3.5e-19 98.6 126 53.2
Lsat_1_v5_gn_7_20981 Lactuca sativa HOM05D003630 ORTHO05D004151 3.5e-19 98.6 114 52.6
Sabra04G0029500 Salix brachista HOM05D003630 ORTHO05D004151 3.5e-19 98.6 111 54.1
BolC5t31435H Brassica oleracea HOM05D003630 ORTHO05D004151 4.6e-19 98.2 125 53.6
Thhalv10003427m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 4.6e-19 98.2 127 46.5
HanXRQChr01g0003821 Helianthus annuus HOM05D003630 ORTHO05D004151 4.6e-19 98.2 124 47.6
Thhalv10017461m.g Eutrema salsugineum HOM05D003630 ORTHO05D004151 6.0e-19 97.8 117 47.0
Sp2g09130 Schrenkiella parvula HOM05D003630 ORTHO05D004151 6.0e-19 97.8 128 45.3
Atru.chr10.1820 Acer truncatum HOM05D003630 ORTHO05D004151 7.8e-19 97.4 116 53.4
Atru.chr10.1837 Acer truncatum HOM05D003630 ORTHO05D004151 7.8e-19 97.4 116 53.4
Aa31sc652G110 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.0e-18 97.1 125 46.4
Aa31sc652G20 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.0e-18 97.1 125 46.4
AL8G15690 Arabidopsis lyrata HOM05D003630 ORTHO05D004151 1.0e-18 97.1 128 45.3
Carub.0008s0422 Capsella rubella HOM05D003630 ORTHO05D004151 1.0e-18 97.1 126 46.0
Aa31LG9G8870 Aethionema arabicum HOM05D003630 ORTHO05D004151 1.3e-18 96.7 123 44.7
COL.COLO4_31436 Corchorus olitorius HOM05D003630 ORTHO05D004151 1.3e-18 96.7 114 55.3
AT5G44300 Arabidopsis thaliana HOM05D003630 ORTHO05D004151 1.7e-18 96.3 128 45.3
Haze_06402 Corylus avellana HOM05D003630 ORTHO05D004151 3.0e-18 95.5 120 49.2
HanXRQChr04g0123791 Helianthus annuus HOM05D003630 ORTHO05D004151 3.9e-18 95.1 121 52.1
Cfa000510 Carpinus fangiana HOM05D003630 ORTHO05D004151 1.1e-17 93.6 118 48.3
Psat1g203680 Pisum sativum HOM05D003630 ORTHO05D004151 5.6e-17 91.3 109 52.3
Sopen03g002370 Solanum pennellii HOM05D003630 ORTHO05D004151 2.1e-16 89.4 120 53.3
Sed0007569 Sechium edule HOM05D003630 ORTHO05D004151 3.6e-16 88.6 106 44.3
CARHR178890 Cardamine hirsuta HOM05D003630 ORTHO05D004151 4.7e-16 88.2 125 48.0
BcaC03g16649 Brassica carinata HOM05D003630 ORTHO05D004151 6.2e-16 87.8 115 44.3
Pp3c15_6160 Physcomitrium patens HOM05D003630 ORTHO05D004151 1.4e-15 86.7 147 34.0
SMO343G0126 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 1.8e-15 86.3 159 34.6
DCAR_008021 Daucus carota HOM05D003630 ORTHO05D004151 2.3e-15 85.9 125 43.2
Lsat_1_v5_gn_1_124360 Lactuca sativa HOM05D003630 ORTHO05D004151 4.0e-15 85.1 104 47.1
C03p22060 Brassica napus HOM05D003630 ORTHO05D004151 1.2e-14 83.6 112 42.9
CAN.G529.26 Capsicum annuum HOM05D003630 ORTHO05D004151 1.5e-14 83.2 69 60.9
SMO367G0919 Selaginella moellendorffii HOM05D003630 ORTHO05D004151 7.5e-14 80.9 123 39.0
MD14G1054500 Malus domestica HOM05D003630 ORTHO05D004151 1.7e-13 79.7 105 43.8
BcaB07g30534 Brassica carinata HOM05D003630 ORTHO05D004151 4.1e-12 75.1 106 42.5
AagrBONN_evm.TU.Sc2ySwM_228.5600 Anthoceros agrestis HOM05D003630 ORTHO05D004151 1.2e-11 73.6 150 32.0
Sc17g0006070 Simmondsia chinensis HOM05D003630 ORTHO05D004151 1.6e-11 73.2 113 45.1
Mapoly0057s0054 Marchantia polymorpha HOM05D003630 ORTHO05D004151 1.0e-10 70.5 143 35.0
ECA248G1596 Erigeron canadensis HOM05D000885 ORTHO05D008875 1.6e-08 63.2 79 43.0
Pp3c10_24000 Physcomitrium patens HOM05D003630 ORTHO05D004151 3.6e-08 62.0 157 29.9
Pp3c20_21690 Physcomitrium patens HOM05D003630 ORTHO05D004151 4.7e-08 61.6 157 31.2
Actinidia26134 Actinidia chinensis HOM05D003630 ORTHO05D004151 2.6e-06 55.8 40 65.0
Pp3c24_1050 Physcomitrium patens HOM05D003630 ORTHO05D004151 2.6e-06 55.8 154 29.2
ECA236G2863 Erigeron canadensis HOM05D004840 ORTHO05D005751 5.8e-06 54.7 46 58.7
ATR0681G069 Amborella trichopoda HOM05D002144 ORTHO05D002170 7.6e-06 54.3 125 32.8
Eucgr.E03257 Eucalyptus grandis HOM05D003630 ORTHO05D004151 7.6e-06 54.3 29 79.3
Psat3g011320 Pisum sativum HOM05D002144 ORTHO05D002170 7.6e-06 54.3 57 50.9


User provided reference genes

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