Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 3.8e-64 248.1 128 100.0
PSO675G4064 Papaver somniferum HOM05D007571 ORTHO05D009439 2.1e-59 232.3 130 96.2
Aqoxy6G02559 Aquilegia oxysepala HOM05D007571 ORTHO05D009439 5.5e-31 137.9 132 59.1
TAR628G1270 Trochodendron aralioides HOM05D007571 ORTHO05D009439 3.6e-30 135.2 117 60.7
QL11p029955 Quercus lobata HOM05D007571 ORTHO05D009439 2.0e-25 119.4 130 51.5
Actinidia27996 Actinidia chinensis HOM05D007571 ORTHO05D009439 1.0e-24 117.1 107 59.8
Prupe.8G147200 Prunus persica HOM05D007571 ORTHO05D009439 1.3e-24 116.7 130 52.3
vmacro19538 Vaccinium macrocarpon HOM05D007571 ORTHO05D009439 1.7e-24 116.3 107 60.7
Lsat_1_v5_gn_2_105800 Lactuca sativa HOM05D007571 ORTHO05D009439 2.2e-24 115.9 110 60.0
Actinidia04391 Actinidia chinensis HOM05D007571 ORTHO05D009439 2.9e-24 115.5 105 58.1
ECA238G3778 Erigeron canadensis HOM05D007571 ORTHO05D009439 6.5e-24 114.4 108 59.3
MD10G1108300 Malus domestica HOM05D007571 ORTHO05D009439 8.5e-24 114.0 130 52.3
CSS0048413 Camellia sinensis var. sinensis HOM05D007571 ORTHO05D009439 1.5e-23 113.2 92 65.2
Medtr1g106075 Medicago truncatula HOM05D007571 ORTHO05D009439 1.5e-23 113.2 131 54.2
Rhsim05G0092500 Rhododendron simsii HOM05D007571 ORTHO05D009439 1.9e-23 112.8 107 56.1
Thecc.02G118900 Theobroma cacao HOM05D007571 ORTHO05D009439 1.9e-23 112.8 91 65.9
RcHm_v2.0_Chr6g0252541 Rosa chinensis HOM05D007571 ORTHO05D009439 2.5e-23 112.5 130 52.3
Nn6g34507 Nelumbo nucifera HOM05D007571 ORTHO05D009439 5.5e-23 111.3 93 62.4
FvH4_2g03581 Fragaria vesca HOM05D007571 ORTHO05D009439 7.2e-23 110.9 130 50.0
FAN20G2923 Fragaria x ananassa HOM05D007571 ORTHO05D009439 7.2e-23 110.9 130 50.0
Sed0007395 Sechium edule HOM05D007571 ORTHO05D009439 7.2e-23 110.9 133 49.6
TWI59G0511 Tripterygium wilfordii HOM05D007571 ORTHO05D009439 9.4e-23 110.5 131 50.4
Duzib052G0547 Durio zibethinus HOM05D007571 ORTHO05D009439 1.2e-22 110.2 91 65.9
Lalb_Chr21g0308001 Lupinus albus HOM05D007571 ORTHO05D009439 1.6e-22 109.8 129 51.2
Medtr3g008630 Medicago truncatula HOM05D007571 ORTHO05D009439 1.6e-22 109.8 131 53.4
Gohir.A12G018900 Gossypium hirsutum HOM05D007571 ORTHO05D009439 2.1e-22 109.4 96 61.5
Atru.chr5.2324 Acer truncatum HOM05D007571 ORTHO05D009439 3.6e-22 108.6 131 49.6
COL.COLO4_32496 Corchorus olitorius HOM05D007571 ORTHO05D009439 3.6e-22 108.6 91 63.7
Ciclev10029547m.g Citrus clementina HOM05D007571 ORTHO05D009439 8.0e-22 107.5 136 48.5
GSVIVG01037807001 Vitis vinifera HOM05D007571 ORTHO05D009439 8.0e-22 107.5 121 53.7
Gohir.D12G019350 Gossypium hirsutum HOM05D007571 ORTHO05D009439 1.0e-21 107.1 96 60.4
MELO3C018528.2 Cucumis melo HOM05D007571 ORTHO05D009439 1.8e-21 106.3 129 50.4
CDE04G1832 Ceratophyllum demersum HOM05D007571 ORTHO05D009439 2.3e-21 105.9 132 52.3
EL10Ac9g22184 Beta vulgaris HOM05D007571 ORTHO05D009439 3.0e-21 105.5 97 58.8
TPR.G21146 Trifolium pratense HOM05D007571 ORTHO05D009439 4.0e-21 105.1 131 50.4
Haze_10272 Corylus avellana HOM05D007571 ORTHO05D009439 6.7e-21 104.4 130 48.5
CsaV3_7G007730 Cucumis sativus L. HOM05D007571 ORTHO05D009439 6.7e-21 104.4 129 49.6
HanXRQChr02g0053531 Helianthus annuus HOM05D007571 ORTHO05D009439 1.5e-20 103.2 109 54.1
Lj5g0013426 Lotus japonicus HOM05D007571 ORTHO05D009439 1.5e-20 103.2 131 47.3
Sc05g0005590 Simmondsia chinensis HOM05D007571 ORTHO05D009439 1.5e-20 103.2 92 62.0
Potri.001G292000 Populus trichocarpa HOM05D007571 ORTHO05D009439 2.6e-20 102.4 134 46.3
PGR042G0328 Punica granatum HOM05D007571 ORTHO05D009439 4.4e-20 101.7 103 50.5
Nitab4.5_0017347g0020 Nicotiana tabacum HOM05D007571 ORTHO05D009439 5.7e-20 101.3 103 54.4
THA.LOC104825387 Tarenaya hassleriana HOM05D007571 ORTHO05D009439 5.7e-20 101.3 135 48.1
Eucgr.G01203 Eucalyptus grandis HOM05D007571 ORTHO05D009439 1.3e-19 100.1 133 47.4
Ah.01g007010 Amaranthus hybridus HOM05D007571 ORTHO05D009439 1.7e-19 99.8 92 58.7
Cc02_g09420 Coffea canephora HOM05D007571 ORTHO05D009439 1.7e-19 99.8 109 50.5
CANSAT25G0272 Cannabis sativa HOM05D007571 ORTHO05D009439 2.2e-19 99.4 78 62.8
CANSAT25G2750 Cannabis sativa HOM05D007571 ORTHO05D009439 2.2e-19 99.4 78 62.8
DCAR_028375 Daucus carota HOM05D007571 ORTHO05D009439 2.2e-19 99.4 88 61.4
Phvul.007G046800 Phaseolus vulgaris HOM05D007571 ORTHO05D009439 2.2e-19 99.4 131 48.1
Solyc05g150152.1 Solanum lycopersicum HOM05D007571 ORTHO05D009439 2.2e-19 99.4 90 57.8
AT1G49975 Arabidopsis thaliana HOM05D007571 ORTHO05D009439 2.8e-19 99.0 131 49.6
AL1G57530 Arabidopsis lyrata HOM05D007571 ORTHO05D009439 3.7e-19 98.6 131 49.6
MSTRG.417 Avicennia marina HOM05D007571 ORTHO05D009439 4.8e-19 98.2 115 50.4
Dinv15820 Davidia involucrata HOM05D007571 ORTHO05D009439 4.8e-19 98.2 88 59.1
Sopen05g033610 Solanum pennellii HOM05D007571 ORTHO05D009439 4.8e-19 98.2 90 56.7
Nitab4.5_0000687g0180 Nicotiana tabacum HOM05D007571 ORTHO05D009439 6.3e-19 97.8 103 51.5
Hund06510 Selenicereus undatus HOM05D007571 ORTHO05D009439 6.3e-19 97.8 113 47.8
CAN.G1433.5 Capsicum annuum HOM05D007571 ORTHO05D009439 1.1e-18 97.1 91 56.0
Oeu024805.1 Olea europaea HOM05D007571 ORTHO05D009439 1.1e-18 97.1 111 50.5
Carub.0001s3916 Capsella rubella HOM05D007571 ORTHO05D009439 1.4e-18 96.7 131 48.1
AUR62030860 Chenopodium quinoa HOM05D007571 ORTHO05D009439 1.4e-18 96.7 72 65.3
Thhalv10011862m.g Eutrema salsugineum HOM05D007571 ORTHO05D009439 1.4e-18 96.7 131 48.9
MBI16_g39621_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.8e-18 96.3 129 48.8
MBI16_g43666_MAGBIO Magnolia biondii HOM05D007571 ORTHO05D009439 1.8e-18 96.3 129 48.8
arahy.Tifrunner.gnm1.ann1.A1M8SQ Arachis hypogaea HOM05D007571 ORTHO05D009439 2.4e-18 95.9 131 43.5
Peaxi162Scf00519g00423 Petunia axillaris HOM05D007571 ORTHO05D009439 2.4e-18 95.9 89 56.2
arahy.Tifrunner.gnm1.ann1.I40GDJ Arachis hypogaea HOM05D007571 ORTHO05D009439 4.1e-18 95.1 131 43.5
Glyma.10G256000 Glycine max HOM05D007571 ORTHO05D009439 4.1e-18 95.1 92 55.4
Sp1g36830 Schrenkiella parvula HOM05D007571 ORTHO05D009439 4.1e-18 95.1 131 48.9
ClCG02G007100 Citrullus lanatus HOM05D007571 ORTHO05D009439 7.0e-18 94.4 84 59.5
SEGI_38446 Sequoiadendron giganteum HOM05D007571 ORTHO05D009439 7.0e-18 94.4 83 61.4
BcaC08g43171 Brassica carinata HOM05D007571 ORTHO05D009439 2.0e-17 92.8 64 71.9
A06p03470 Brassica napus HOM05D007571 ORTHO05D009439 2.0e-17 92.8 64 71.9
C06p04720 Brassica napus HOM05D007571 ORTHO05D009439 2.0e-17 92.8 64 71.9
BraA06t23555Z Brassica rapa HOM05D007571 ORTHO05D009439 2.0e-17 92.8 64 71.9
Migut.F01585 Erythranthe guttata HOM05D007571 ORTHO05D009439 3.5e-17 92.0 67 65.7
BcaB07g33447 Brassica carinata HOM05D007571 ORTHO05D009439 4.5e-17 91.7 64 70.3
Os03g0731100 Oryza sativa ssp. japonica HOM05D007571 ORTHO05D009439 5.9e-17 91.3 90 55.6
CARHR040010 Cardamine hirsuta HOM05D007571 ORTHO05D009439 1.0e-16 90.5 67 64.2
CiPaw.05G019300 Carya illinoinensis HOM05D000470 ORTHO05D000348 2.9e-16 89.0 70 65.7
SalBow6G2573 Salvia bowleyana HOM05D007571 ORTHO05D009439 2.9e-16 89.0 71 63.4
ATR0739G046 Amborella trichopoda HOM05D007571 ORTHO05D009439 1.5e-15 86.7 63 68.3
Gohir.D12G019400 Gossypium hirsutum HOM05D005832 ORTHO05D007117 1.5e-15 86.7 78 60.3
PGSC0003DMG400023397 Solanum tuberosum HOM05D007571 ORTHO05D009439 1.5e-15 86.7 59 71.2
Sabra16G0182000 Salix brachista HOM05D007571 ORTHO05D009439 5.5e-15 84.7 174 35.6
Gorai.008G019700 Gossypium raimondii HOM05D005832 ORTHO05D007117 1.2e-14 83.6 85 55.3
SGA_v2.0_scaffold62G21311 Striga asiatica HOM05D007002 ORTHO05D008602 3.6e-14 82.0 57 70.2
AagrBONN_evm.TU.Sc2ySwM_228.3762 Anthoceros agrestis HOM05D007571 ORTHO05D009439 8.0e-14 80.9 78 56.4
VMungo0720G0585 Vigna mungo HOM05D007571 ORTHO05D009439 8.0e-14 80.9 112 45.5
Zm00001eb056210 Zea mays HOM05D007571 ORTHO05D009439 3.0e-13 79.0 70 58.6
BolC6t35600H Brassica oleracea HOM05D007571 ORTHO05D009439 8.8e-13 77.4 93 49.5
CBR_g6736 Chara braunii HOM05D007571 ORTHO05D009439 1.5e-12 76.6 81 51.9
Pp3c17_8360 Physcomitrium patens HOM05D007571 ORTHO05D009439 8.3e-11 70.9 87 48.3
SalBow6G2452 Salvia bowleyana HOM05D007571 ORTHO05D009439 9.4e-07 57.4 46 56.5
Cre02.g086100 Chlamydomonas reinhardtii HOM05D007571 ORTHO05D009439 2.7e-06 55.8 89 40.4


User provided reference genes

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