Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3894 Papaver somniferum HOM05D002959 ORTHO05D003237 3.1e-72 275.0 137 100.0
PSO675G6525 Papaver somniferum HOM05D002959 ORTHO05D003237 1.9e-61 239.2 135 88.9
PSO541G0978 Papaver somniferum HOM05D002959 ORTHO05D003237 1.4e-40 169.9 148 64.9
PSO675G5746 Papaver somniferum HOM05D002959 ORTHO05D003237 2.0e-26 122.9 145 52.4
PSO478G4511 Papaver somniferum HOM05D002959 ORTHO05D003237 4.8e-25 118.2 148 48.0
PSO541G3942 Papaver somniferum HOM05D002959 ORTHO05D003237 1.1e-24 117.1 145 51.7
HanXRQChr15g0496411 Helianthus annuus HOM05D002959 ORTHO05D003237 2.4e-24 115.9 146 46.6
PSO675G5378 Papaver somniferum HOM05D002959 ORTHO05D003237 4.1e-24 115.2 113 58.4
Peaxi162Scf00007g00929 Petunia axillaris HOM05D002959 ORTHO05D003237 1.0e-22 110.5 144 43.8
Solyc07g052440.3 Solanum lycopersicum HOM05D002959 ORTHO05D003237 1.7e-22 109.8 147 44.2
Lsat_1_v5_gn_8_128621 Lactuca sativa HOM05D002959 ORTHO05D003237 2.2e-22 109.4 144 45.1
PGSC0003DMG400025496 Solanum tuberosum HOM05D002959 ORTHO05D003237 3.8e-22 108.6 147 44.2
ECA233G6126 Erigeron canadensis HOM05D002959 ORTHO05D003237 8.5e-22 107.5 146 44.5
EL10Ac9g20667 Beta vulgaris HOM05D002959 ORTHO05D003237 1.1e-21 107.1 145 43.4
Nitab4.5_0002137g0130 Nicotiana tabacum HOM05D002959 ORTHO05D003237 1.5e-21 106.7 144 45.1
Sopen07g026070 Solanum pennellii HOM05D002959 ORTHO05D003237 2.5e-21 105.9 147 42.9
Aa31LG1G19530 Aethionema arabicum HOM05D002959 ORTHO05D003237 3.2e-21 105.5 144 43.8
Ah.01g014550 Amaranthus hybridus HOM05D002959 ORTHO05D003237 4.2e-21 105.1 145 43.4
CANSAT64G1461 Cannabis sativa HOM05D002959 ORTHO05D003237 4.2e-21 105.1 148 43.9
CAN.G846.4 Capsicum annuum HOM05D002959 ORTHO05D003237 5.5e-21 104.8 144 43.8
Solyc07g052430.3 Solanum lycopersicum HOM05D002959 ORTHO05D003237 5.5e-21 104.8 144 44.4
Sopen07g026060 Solanum pennellii HOM05D002959 ORTHO05D003237 1.2e-20 103.6 144 44.4
Cpa.g.sc4.170 Carica papaya HOM05D002959 ORTHO05D003237 1.6e-20 103.2 143 43.4
Lj1A760T25 Lonicera japonica HOM05D002959 ORTHO05D003237 1.6e-20 103.2 146 45.2
Aqoxy1G03306 Aquilegia oxysepala HOM05D002959 ORTHO05D003237 2.1e-20 102.8 147 45.6
AUR62025051 Chenopodium quinoa HOM05D002959 ORTHO05D003237 3.6e-20 102.1 145 42.1
Hma1.2p1_0948F.1_g240420 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 3.6e-20 102.1 146 41.1
Hma1.2p1_1768F.1_g301525 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 3.6e-20 102.1 146 41.1
Lj1A759T41 Lonicera japonica HOM05D002959 ORTHO05D003237 3.6e-20 102.1 146 44.5
TAR626G0389 Trochodendron aralioides HOM05D002959 ORTHO05D003237 3.6e-20 102.1 144 44.4
CSS0017236 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 4.7e-20 101.7 144 42.4
PGSC0003DMG400025497 Solanum tuberosum HOM05D002959 ORTHO05D003237 4.7e-20 101.7 144 42.4
CAN.G846.3 Capsicum annuum HOM05D002959 ORTHO05D003237 8.0e-20 100.9 144 41.7
AUR62037134 Chenopodium quinoa HOM05D002959 ORTHO05D003237 8.0e-20 100.9 145 41.4
unitig_699.g19615 Utricularia gibba HOM05D000109 ORTHO05D003237 1.0e-19 100.5 141 42.6
Nn1g03594 Nelumbo nucifera HOM05D002959 ORTHO05D003237 1.4e-19 100.1 147 42.2
PSO210G0061 Papaver somniferum HOM05D002959 ORTHO05D003237 3.0e-19 99.0 146 45.2
PGR042G1226 Punica granatum HOM05D002959 ORTHO05D003237 3.0e-19 99.0 143 39.9
Dinv39701 Davidia involucrata HOM05D002959 ORTHO05D003237 4.0e-19 98.6 146 41.1
CiPaw.03G161200 Carya illinoinensis HOM05D002959 ORTHO05D003237 5.2e-19 98.2 144 40.3
Oeu041931.2 Olea europaea HOM05D002959 ORTHO05D003237 5.2e-19 98.2 144 42.4
CAN.G846.2 Capsicum annuum HOM05D002959 ORTHO05D003237 1.2e-18 97.1 144 40.3
PSO210G7437 Papaver somniferum HOM05D002959 ORTHO05D003237 1.2e-18 97.1 146 45.2
AL1G14980 Arabidopsis lyrata HOM05D002959 ORTHO05D003237 1.5e-18 96.7 141 42.6
MD17G1095500 Malus domestica HOM05D002959 ORTHO05D003237 1.5e-18 96.7 143 39.9
Medtr4g047630 Medicago truncatula HOM05D002959 ORTHO05D003237 1.5e-18 96.7 142 40.8
DCAR_012948 Daucus carota HOM05D002959 ORTHO05D003237 2.0e-18 96.3 144 42.4
Psat7g158640 Pisum sativum HOM05D002959 ORTHO05D003237 2.0e-18 96.3 144 40.3
Prupe.3G218400 Prunus persica HOM05D002959 ORTHO05D003237 2.0e-18 96.3 143 39.9
RcHm_v2.0_Chr2g0159721 Rosa chinensis HOM05D002959 ORTHO05D003237 2.0e-18 96.3 142 40.8
FAN05G3149 Fragaria x ananassa HOM05D002959 ORTHO05D003237 2.6e-18 95.9 142 40.8
Aa31LG5G4670 Aethionema arabicum HOM05D002959 ORTHO05D003237 3.4e-18 95.5 144 42.4
A08p36530 Brassica napus HOM05D002959 ORTHO05D003237 3.4e-18 95.5 141 41.8
C08p01810 Brassica napus HOM05D002959 ORTHO05D003237 3.4e-18 95.5 141 41.8
BolC8t46981H Brassica oleracea HOM05D002959 ORTHO05D003237 3.4e-18 95.5 141 41.8
FAN02G0167 Fragaria x ananassa HOM05D002959 ORTHO05D003237 3.4e-18 95.5 142 40.8
Manes.12G075500 Manihot esculenta HOM05D002959 ORTHO05D003237 3.4e-18 95.5 141 41.1
Nitab4.5_0009026g0020 Nicotiana tabacum HOM05D002959 ORTHO05D003237 3.4e-18 95.5 143 42.0
TPR.G4665 Trifolium pratense HOM05D002959 ORTHO05D003237 3.4e-18 95.5 144 40.3
Carub.0001s0449 Capsella rubella HOM05D002959 ORTHO05D003237 4.4e-18 95.1 141 44.0
BraA08t35554Z Brassica rapa HOM05D002959 ORTHO05D003237 5.7e-18 94.7 141 41.8
Dinv05448 Davidia involucrata HOM05D002959 ORTHO05D003237 5.7e-18 94.7 144 38.9
Migut.M00412 Erythranthe guttata HOM05D002959 ORTHO05D003237 5.7e-18 94.7 142 40.8
FAN09G0349 Fragaria x ananassa HOM05D002959 ORTHO05D003237 5.7e-18 94.7 142 40.8
MD17G1095300 Malus domestica HOM05D002959 ORTHO05D003237 7.5e-18 94.4 143 38.5
Atru.chr6.3170 Acer truncatum HOM05D002959 ORTHO05D003237 9.7e-18 94.0 143 39.2
CANSAT64G0672 Cannabis sativa HOM05D002959 ORTHO05D003237 9.7e-18 94.0 149 41.6
CARHR004690 Cardamine hirsuta HOM05D002959 ORTHO05D003237 9.7e-18 94.0 141 41.1
Cfa014417 Carpinus fangiana HOM05D002959 ORTHO05D003237 9.7e-18 94.0 144 38.9
AL4G27760 Arabidopsis lyrata HOM05D002959 ORTHO05D003237 1.3e-17 93.6 142 40.8
CARHR126200 Cardamine hirsuta HOM05D002959 ORTHO05D003237 1.3e-17 93.6 142 40.1
Ca_26237_v3 Cicer arietinum L. HOM05D002959 ORTHO05D003237 1.3e-17 93.6 147 40.1
Haze_12877 Corylus avellana HOM05D002959 ORTHO05D003237 1.3e-17 93.6 144 38.9
ClCG07G009050 Citrullus lanatus HOM05D002959 ORTHO05D003237 1.7e-17 93.2 144 40.3
FvH4_6g43380 Fragaria vesca HOM05D002959 ORTHO05D003237 1.7e-17 93.2 142 40.1
Sc21g0001590 Simmondsia chinensis HOM05D002959 ORTHO05D003237 1.7e-17 93.2 144 36.1
AT1G05210 Arabidopsis thaliana HOM05D002959 ORTHO05D003237 2.2e-17 92.8 141 41.8
FAN14G2056 Fragaria x ananassa HOM05D002959 ORTHO05D003237 2.2e-17 92.8 142 40.1
TAR626G1024 Trochodendron aralioides HOM05D002959 ORTHO05D003237 2.8e-17 92.4 146 41.1
Actinidia09710 Actinidia chinensis HOM05D002959 ORTHO05D003237 4.8e-17 91.7 141 41.1
AT2G32380 Arabidopsis thaliana HOM05D002959 ORTHO05D003237 4.8e-17 91.7 142 40.1
A10p03750 Brassica napus HOM05D002959 ORTHO05D003237 4.8e-17 91.7 144 41.0
BraA10t42648Z Brassica rapa HOM05D002959 ORTHO05D003237 4.8e-17 91.7 142 41.5
CDE02G3691 Ceratophyllum demersum HOM05D002959 ORTHO05D003237 4.8e-17 91.7 145 37.9
COL.COLO4_27696 Corchorus olitorius HOM05D002959 ORTHO05D003237 4.8e-17 91.7 144 37.5
Glyma.12G099900 Glycine max HOM05D002959 ORTHO05D003237 4.8e-17 91.7 143 39.2
TPR.G23666 Trifolium pratense HOM05D002959 ORTHO05D003237 4.8e-17 91.7 144 38.9
Lj3g0006213 Lotus japonicus HOM05D002959 ORTHO05D003237 6.3e-17 91.3 146 37.7
AL4G27750 Arabidopsis lyrata HOM05D002959 ORTHO05D003237 8.3e-17 90.9 142 40.8
arahy.Tifrunner.gnm1.ann1.18208U Arachis hypogaea HOM05D002959 ORTHO05D003237 8.3e-17 90.9 140 38.6
C05p03450 Brassica napus HOM05D002959 ORTHO05D003237 8.3e-17 90.9 144 41.0
arahy.Tifrunner.gnm1.ann1.X4J0KT Arachis hypogaea HOM05D002959 ORTHO05D003237 1.1e-16 90.5 140 38.6
BcaC07g36857 Brassica carinata HOM05D002959 ORTHO05D003237 1.1e-16 90.5 141 41.1
BolC5t29124H Brassica oleracea HOM05D002959 ORTHO05D003237 1.1e-16 90.5 144 41.0
Carub.0004s1373 Capsella rubella HOM05D002959 ORTHO05D003237 1.1e-16 90.5 142 39.4
Cc05_g04870 Coffea canephora HOM05D002959 ORTHO05D003237 1.1e-16 90.5 146 39.0
ECA233G1396 Erigeron canadensis HOM05D002959 ORTHO05D003237 1.1e-16 90.5 87 46.0
Manes.13G070900 Manihot esculenta HOM05D002959 ORTHO05D003237 1.1e-16 90.5 141 41.1
MSTRG.6556 Avicennia marina HOM05D002959 ORTHO05D003237 1.8e-16 89.7 142 38.7
Lalb_Chr03g0028761 Lupinus albus HOM05D002959 ORTHO05D003237 1.8e-16 89.7 144 41.0
QL08p033321 Quercus lobata HOM05D002959 ORTHO05D003237 2.4e-16 89.4 144 38.2
CSS0034965 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 3.1e-16 89.0 143 39.9
Ciclev10016979m.g Citrus clementina HOM05D002959 ORTHO05D003237 3.1e-16 89.0 142 38.0
Gohir.D02G134100 Gossypium hirsutum HOM05D002959 ORTHO05D003237 3.1e-16 89.0 144 37.5
Gorai.005G150000 Gossypium raimondii HOM05D002959 ORTHO05D003237 3.1e-16 89.0 144 37.5
HanXRQChr15g0496401 Helianthus annuus HOM05D002959 ORTHO05D003237 3.1e-16 89.0 143 40.6
ClCG02G001850 Citrullus lanatus HOM05D002959 ORTHO05D003237 4.1e-16 88.6 143 39.2
Glyma.06G303800 Glycine max HOM05D002959 ORTHO05D003237 4.1e-16 88.6 143 38.5
Sp1g04070 Schrenkiella parvula HOM05D002959 ORTHO05D003237 4.1e-16 88.6 141 40.4
SpUn0024_0070 Schrenkiella parvula HOM05D002959 ORTHO05D003237 4.1e-16 88.6 141 40.4
CSS0025283 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 5.3e-16 88.2 150 40.7
CSS0045723 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 5.3e-16 88.2 143 39.9
Duzib251G0741 Durio zibethinus HOM05D002959 ORTHO05D003237 5.3e-16 88.2 141 37.6
Duzib268G1581 Durio zibethinus HOM05D002959 ORTHO05D003237 5.3e-16 88.2 141 36.9
Thhalv10008934m.g Eutrema salsugineum HOM05D002959 ORTHO05D003237 5.3e-16 88.2 141 40.4
Sed0004815 Sechium edule HOM05D002959 ORTHO05D003237 5.3e-16 88.2 145 35.9
CsaV3_7G003690 Cucumis sativus L. HOM05D002959 ORTHO05D003237 7.0e-16 87.8 142 38.0
Gohir.A03G109000 Gossypium hirsutum HOM05D002959 ORTHO05D003237 7.0e-16 87.8 142 36.6
Phvul.011G104500 Phaseolus vulgaris HOM05D002959 ORTHO05D003237 7.0e-16 87.8 143 37.1
Thecc.02G313300 Theobroma cacao HOM05D002959 ORTHO05D003237 7.0e-16 87.8 143 37.8
COL.COLO4_27698 Corchorus olitorius HOM05D002959 ORTHO05D003237 9.1e-16 87.4 141 38.3
MELO3C018810.2 Cucumis melo HOM05D002959 ORTHO05D003237 9.1e-16 87.4 142 37.3
CSS0016007 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 1.2e-15 87.0 136 41.9
CSS0022732 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 1.2e-15 87.0 136 41.9
Thhalv10017325m.g Eutrema salsugineum HOM05D002959 ORTHO05D003237 1.2e-15 87.0 142 37.3
COL.COLO4_27691 Corchorus olitorius HOM05D002959 ORTHO05D003237 1.6e-15 86.7 142 36.6
Eucgr.A01714 Eucalyptus grandis HOM05D002959 ORTHO05D003237 1.6e-15 86.7 142 38.0
Hma1.2p1_1768F.1_g301560 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 1.6e-15 86.7 162 36.4
MD09G1107500 Malus domestica HOM05D002959 ORTHO05D003237 1.6e-15 86.7 148 37.8
CSS0022033 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 2.7e-15 85.9 148 39.9
CsaV3_4G005160 Cucumis sativus L. HOM05D002959 ORTHO05D003237 2.7e-15 85.9 146 39.0
MD17G1095600 Malus domestica HOM05D002959 ORTHO05D003237 3.5e-15 85.5 143 36.4
VMungo1127G2165 Vigna mungo HOM05D002959 ORTHO05D003237 3.5e-15 85.5 143 36.4
MELO3C017552.2 Cucumis melo HOM05D002959 ORTHO05D003237 4.5e-15 85.1 144 39.6
ATR0752G073 Amborella trichopoda HOM05D002959 ORTHO05D003237 5.9e-15 84.7 140 39.3
Cc05_g04860 Coffea canephora HOM05D002959 ORTHO05D003237 7.7e-15 84.3 143 39.9
COL.COLO4_27694 Corchorus olitorius HOM05D002959 ORTHO05D003237 7.7e-15 84.3 144 35.4
ECA233G3122 Erigeron canadensis HOM05D000906 ORTHO05D000713 7.7e-15 84.3 141 39.0
MBI18_g10793_MAGBIO Magnolia biondii HOM05D002959 ORTHO05D003237 7.7e-15 84.3 139 39.6
Duzib065G0003 Durio zibethinus HOM05D002959 ORTHO05D003237 1.0e-14 84.0 141 36.2
Sabra09G0090200 Salix brachista HOM05D002959 ORTHO05D003237 1.3e-14 83.6 142 36.6
COL.COLO4_27690 Corchorus olitorius HOM05D002959 ORTHO05D003237 2.2e-14 82.8 142 33.1
Potri.009G117800 Populus trichocarpa HOM05D002959 ORTHO05D003237 2.2e-14 82.8 142 38.0
THA.LOC104800984 Tarenaya hassleriana HOM05D002959 ORTHO05D003237 2.2e-14 82.8 142 37.3
MD17G1095200 Malus domestica HOM05D002959 ORTHO05D003237 2.9e-14 82.4 143 35.7
Prupe.3G218200 Prunus persica HOM05D002959 ORTHO05D003237 2.9e-14 82.4 143 35.7
TWI36G0566 Tripterygium wilfordii HOM05D002959 ORTHO05D003237 3.8e-14 82.0 143 37.8
Sed0000729 Sechium edule HOM05D002959 ORTHO05D003237 8.5e-14 80.9 145 35.9
TWI36G0789 Tripterygium wilfordii HOM05D002959 ORTHO05D003237 8.5e-14 80.9 143 38.5
Duzib268G0859 Durio zibethinus HOM05D002959 ORTHO05D003237 1.5e-13 80.1 142 35.9
COL.COLO4_27693 Corchorus olitorius HOM05D002959 ORTHO05D003237 1.9e-13 79.7 142 32.4
COL.COLO4_27692 Corchorus olitorius HOM05D002959 ORTHO05D003237 3.2e-13 79.0 142 33.8
FAN05G2600 Fragaria x ananassa HOM05D002959 ORTHO05D003237 3.2e-13 79.0 104 41.3
COL.COLO4_27697 Corchorus olitorius HOM05D002959 ORTHO05D003237 4.2e-13 78.6 143 33.6
Duzib251G0878 Durio zibethinus HOM05D002959 ORTHO05D003237 5.5e-13 78.2 142 33.1
FvH4_6g43370 Fragaria vesca HOM05D002959 ORTHO05D003237 5.5e-13 78.2 148 34.5
Sp4g14750 Schrenkiella parvula HOM05D002959 ORTHO05D003237 9.4e-13 77.4 142 38.7
CSS0001025 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 1.2e-12 77.0 148 37.2
TWI36G0391 Tripterygium wilfordii HOM05D002959 ORTHO05D003237 1.2e-12 77.0 145 36.6
HPP92_010103 Vanilla planifolia HOM05D002959 ORTHO05D003237 1.6e-12 76.6 129 34.9
CSS0046576 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 2.1e-12 76.3 143 37.1
CSS0000030 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 3.6e-12 75.5 138 39.9
Duzib251G0261 Durio zibethinus HOM05D002959 ORTHO05D003237 3.6e-12 75.5 146 34.2
GSVIVG01030603001 Vitis vinifera HOM05D002959 ORTHO05D003237 4.7e-12 75.1 85 44.7
FvH4_7g06210 Fragaria vesca HOM05D002959 ORTHO05D003237 1.0e-11 73.9 145 29.7
FAN06G3240 Fragaria x ananassa HOM05D002959 ORTHO05D003237 1.0e-11 73.9 145 29.7
COL.COLO4_27695 Corchorus olitorius HOM05D002959 ORTHO05D003237 1.8e-11 73.2 145 31.7
AT1G05220 Arabidopsis thaliana HOM05D002959 ORTHO05D003237 5.2e-11 71.6 142 37.3
AL1G14990 Arabidopsis lyrata HOM05D002959 ORTHO05D003237 8.8e-11 70.9 142 37.3
Dinv05451 Davidia involucrata HOM05D002959 ORTHO05D003237 2.6e-10 69.3 145 32.4
SalBow7G4760 Salvia bowleyana HOM05D002959 ORTHO05D003237 4.4e-10 68.6 128 37.5
CSS0023857 Camellia sinensis var. sinensis HOM05D002959 ORTHO05D003237 9.8e-10 67.4 159 34.0
Rhsim06G0160800 Rhododendron simsii HOM05D002959 ORTHO05D003237 1.3e-09 67.0 201 28.4
Os07g0458500 Oryza sativa ssp. japonica HOM05D002959 ORTHO05D003237 1.7e-09 66.6 101 40.6
Zm00001eb305670 Zea mays HOM05D002959 ORTHO05D003237 2.2e-09 66.2 143 32.9
Os07g0458700 Oryza sativa ssp. japonica HOM05D002959 ORTHO05D003237 2.8e-09 65.9 143 33.6
MBI18_g10797_MAGBIO Magnolia biondii HOM05D002959 ORTHO05D003237 7.0e-08 61.2 143 34.3
Thecc.02G313100 Theobroma cacao HOM05D002959 ORTHO05D003237 2.0e-07 59.7 58 48.3
Nn1g07085 Nelumbo nucifera HOM05D002959 ORTHO05D003237 4.5e-07 58.5 106 35.8
Hma1.2p1_1768F.1_g301550 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 5.9e-07 58.2 116 35.3
MBI18_g10792_MAGBIO Magnolia biondii HOM05D002959 ORTHO05D003237 7.7e-07 57.8 108 37.0
TAR626G0577 Trochodendron aralioides HOM05D000861 ORTHO05D003237 7.7e-07 57.8 120 35.8
TAR371G0304 Trochodendron aralioides HOM05D000861 ORTHO05D003237 1.3e-06 57.0 137 34.3
Hma1.2p1_0328F.1_g126790 Hydrangea macrophylla HOM05D002959 ORTHO05D003237 1.7e-06 56.6 108 32.4


User provided reference genes

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