Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 8.1e-106 387.1 198 100.0
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 3.3e-99 365.2 201 94.5
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 2.1e-58 229.6 203 64.0
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 2.8e-58 229.2 143 80.4
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 2.4e-57 226.1 139 80.6
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 3.1e-57 225.7 192 66.7
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 3.1e-57 225.7 143 80.4
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 4.1e-57 225.3 183 66.1
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 4.1e-57 225.3 175 66.9
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 6.9e-57 224.6 140 80.7
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 6.9e-57 224.6 201 62.2
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 6.9e-57 224.6 165 71.5
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 9.0e-57 224.2 186 66.1
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 9.0e-57 224.2 139 79.9
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 1.2e-56 223.8 123 89.4
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 1.2e-56 223.8 172 70.9
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 1.5e-56 223.4 138 80.4
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 2.0e-56 223.0 142 77.5
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 2.0e-56 223.0 167 70.1
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 2.6e-56 222.6 185 66.5
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 2.6e-56 222.6 122 87.7
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 2.6e-56 222.6 147 74.1
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 2.6e-56 222.6 125 85.6
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 2.6e-56 222.6 144 77.8
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 4.5e-56 221.9 186 65.1
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 4.5e-56 221.9 193 63.7
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 5.9e-56 221.5 174 68.4
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 5.9e-56 221.5 135 80.7
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.9e-56 221.5 186 65.1
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 5.9e-56 221.5 153 71.2
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 5.9e-56 221.5 125 84.8
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 7.6e-56 221.1 189 64.6
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 7.6e-56 221.1 137 78.1
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 7.6e-56 221.1 137 79.6
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.3e-55 220.3 197 62.4
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 1.3e-55 220.3 169 68.0
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 1.3e-55 220.3 122 86.9
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 1.7e-55 219.9 125 84.8
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 1.7e-55 219.9 147 75.5
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 1.7e-55 219.9 192 63.0
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 2.9e-55 219.2 125 82.4
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 2.9e-55 219.2 170 67.1
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 2.9e-55 219.2 141 76.6
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 2.9e-55 219.2 125 84.0
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 3.8e-55 218.8 140 78.6
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 5.0e-55 218.4 142 78.2
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 5.0e-55 218.4 159 69.8
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 5.0e-55 218.4 202 60.9
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 6.5e-55 218.0 143 75.5
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 6.5e-55 218.0 122 86.9
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 6.5e-55 218.0 179 65.9
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 6.5e-55 218.0 154 71.4
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 8.4e-55 217.6 164 67.1
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 8.4e-55 217.6 164 67.1
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 1.1e-54 217.2 200 64.0
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 1.1e-54 217.2 140 76.4
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 1.1e-54 217.2 148 73.6
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 1.1e-54 217.2 125 83.2
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 1.4e-54 216.9 189 65.6
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.4e-54 216.9 183 66.1
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.4e-54 216.9 141 75.9
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.9e-54 216.5 136 76.5
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 1.9e-54 216.5 125 84.0
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 1.9e-54 216.5 191 61.8
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 2.5e-54 216.1 125 80.0
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 2.5e-54 216.1 144 75.7
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 2.5e-54 216.1 137 76.6
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 2.5e-54 216.1 140 75.0
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 2.5e-54 216.1 155 71.0
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 3.2e-54 215.7 136 77.2
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 7.2e-54 214.5 137 75.2
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 7.2e-54 214.5 176 64.2
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 7.2e-54 214.5 137 79.6
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 9.3e-54 214.2 142 76.1
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 9.3e-54 214.2 136 75.7
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 9.3e-54 214.2 191 61.3
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 9.3e-54 214.2 159 68.6
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 1.2e-53 213.8 122 83.6
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 2.7e-53 212.6 124 80.6
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 2.7e-53 212.6 144 75.7
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 2.7e-53 212.6 143 74.8
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 3.5e-53 212.2 190 62.6
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 6.1e-53 211.5 202 59.4
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 1.8e-52 209.9 186 61.8
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 1.8e-52 209.9 144 72.9
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 2.3e-52 209.5 124 82.3
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 3.0e-52 209.1 143 73.4
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 8.7e-52 207.6 185 59.5
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.1e-51 207.2 135 71.9
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.9e-51 206.5 149 71.1
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 1.9e-51 206.5 198 59.1
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 1.8e-49 199.9 123 74.8
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 3.1e-49 199.1 193 57.0
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.0e-47 194.1 149 67.8
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 1.7e-47 193.4 176 59.1
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 9.4e-46 187.6 190 57.4
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 7.9e-45 184.5 122 71.3
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.1e-43 180.6 99 87.9
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 2.5e-43 179.5 124 66.9
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.8e-42 176.0 122 66.4
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 1.4e-41 173.7 122 67.2
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 1.8e-41 173.3 122 66.4
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 3.1e-41 172.6 122 66.4
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 2.5e-38 162.9 106 71.7
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 1.1e-33 147.5 147 59.2
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 7.0e-33 144.8 104 72.1
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.3e-31 140.6 150 54.7
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 8.8e-28 127.9 141 53.9
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 2.2e-26 123.2 107 60.7
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 1.8e-25 120.2 166 41.6
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 8.5e-23 111.3 67 80.6
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 8.0e-21 104.8 120 47.5
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 2.4e-17 93.2 150 44.0
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 7.0e-17 91.7 71 60.6
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 3.8e-15 85.9 85 54.1
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 3.8e-15 85.9 85 54.1
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 1.5e-14 84.0 45 84.4
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 7.2e-14 81.6 97 50.5
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 9.4e-14 81.3 43 88.4
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 3.0e-12 76.3 114 42.1
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 2.8e-10 69.7 36 86.1
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.4e-09 65.5 42 69.0
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.6e-08 63.9 36 83.3


User provided reference genes

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