Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3558 Papaver somniferum HOM05D007507 ORTHO05D009420 1.6e-61 239.2 120 100.0
PSO675G6999 Papaver somniferum HOM05D007507 ORTHO05D009420 2.5e-49 198.7 103 97.1
Nn1g04226 Nelumbo nucifera HOM05D007507 ORTHO05D009420 3.5e-19 98.6 106 52.8
Dinv17350 Davidia involucrata HOM05D007507 ORTHO05D009420 1.3e-18 96.7 96 53.1
Actinidia05654 Actinidia chinensis HOM05D007507 ORTHO05D009420 1.5e-17 93.2 106 47.2
TAR626G1744 Trochodendron aralioides HOM05D007507 ORTHO05D009420 5.5e-17 91.3 87 54.0
Ciclev10016932m.g Citrus clementina HOM05D007507 ORTHO05D009420 1.6e-16 89.7 112 46.4
Actinidia16570 Actinidia chinensis HOM05D007507 ORTHO05D009420 2.1e-16 89.4 107 46.7
Thecc.06G181600 Theobroma cacao HOM05D007507 ORTHO05D009420 2.7e-16 89.0 98 49.0
Aqoxy4G00641 Aquilegia oxysepala HOM05D007507 ORTHO05D009420 1.4e-15 86.7 76 56.6
GSVIVG01021107001 Vitis vinifera HOM05D007507 ORTHO05D009420 4.0e-15 85.1 95 51.6
CSS0001598 Camellia sinensis var. sinensis HOM05D007507 ORTHO05D009420 6.8e-15 84.3 100 47.0
Manes.17G048900 Manihot esculenta HOM05D007507 ORTHO05D009420 6.8e-15 84.3 86 57.0
Manes.16G031300 Manihot esculenta HOM05D007507 ORTHO05D009420 8.8e-15 84.0 96 52.1
Duzib235G0685 Durio zibethinus HOM05D007507 ORTHO05D009420 2.0e-14 82.8 100 45.0
Lalb_Chr20g0121601 Lupinus albus HOM05D007507 ORTHO05D009420 2.0e-14 82.8 105 44.8
Potri.004G048201 Populus trichocarpa HOM05D007507 ORTHO05D009420 2.0e-14 82.8 81 56.8
Potri.011G057400 Populus trichocarpa HOM05D007507 ORTHO05D009420 2.0e-14 82.8 81 56.8
PGSC0003DMG400031763 Solanum tuberosum HOM05D007507 ORTHO05D009420 2.0e-14 82.8 79 58.2
Dinv40597 Davidia involucrata HOM05D007507 ORTHO05D009420 2.6e-14 82.4 101 49.5
Solyc02g077720.4 Solanum lycopersicum HOM05D007507 ORTHO05D009420 2.6e-14 82.4 84 54.8
MBI07_g29118_MAGBIO Magnolia biondii HOM05D007507 ORTHO05D009420 3.4e-14 82.0 114 47.4
MSTRG.14710 Avicennia marina HOM05D007507 ORTHO05D009420 7.5e-14 80.9 93 46.2
Duzib192G0611 Durio zibethinus HOM05D007507 ORTHO05D009420 7.5e-14 80.9 94 46.8
Glyma.07G201000 Glycine max HOM05D007507 ORTHO05D009420 7.5e-14 80.9 94 47.9
QL05p042078 Quercus lobata HOM05D007507 ORTHO05D009420 9.8e-14 80.5 84 52.4
Sopen02g022610 Solanum pennellii HOM05D007507 ORTHO05D009420 9.8e-14 80.5 83 54.2
Glyma.13G175400 Glycine max HOM05D007507 ORTHO05D009420 1.3e-13 80.1 95 47.4
Sabra04G0030100 Salix brachista HOM05D007507 ORTHO05D009420 1.3e-13 80.1 75 58.7
Gohir.A05G159400 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.7e-13 79.7 97 46.4
Lsat_1_v5_gn_7_22681 Lactuca sativa HOM05D007507 ORTHO05D009420 1.7e-13 79.7 79 55.7
TPR.G39426 Trifolium pratense HOM05D007507 ORTHO05D009420 2.8e-13 79.0 95 48.4
Medtr2g014380 Medicago truncatula HOM05D007507 ORTHO05D009420 4.8e-13 78.2 104 44.2
CiPaw.10G052300 Carya illinoinensis HOM05D007507 ORTHO05D009420 6.3e-13 77.8 88 48.9
DCAR_004049 Daucus carota HOM05D007507 ORTHO05D009420 6.3e-13 77.8 115 41.7
CANSAT35G2017 Cannabis sativa HOM05D007507 ORTHO05D009420 8.3e-13 77.4 98 51.0
Lj4g0010126 Lotus japonicus HOM05D007507 ORTHO05D009420 8.3e-13 77.4 115 40.9
Gohir.D05G162100 Gossypium hirsutum HOM05D007507 ORTHO05D009420 1.1e-12 77.0 97 46.4
Gorai.009G167100 Gossypium raimondii HOM05D007507 ORTHO05D009420 1.1e-12 77.0 91 47.3
MD05G1310700 Malus domestica HOM05D007507 ORTHO05D009420 1.4e-12 76.6 94 47.9
Psat7g115600 Pisum sativum HOM05D007507 ORTHO05D009420 1.4e-12 76.6 92 47.8
Sabra11G0039300 Salix brachista HOM05D007507 ORTHO05D009420 1.4e-12 76.6 81 53.1
Atru.chr10.1803 Acer truncatum HOM05D007507 ORTHO05D009420 1.8e-12 76.3 109 43.1
ECA236G3296 Erigeron canadensis HOM05D007507 ORTHO05D009420 2.4e-12 75.9 78 51.3
Cpa.g.sc27.9 Carica papaya HOM05D007507 ORTHO05D009420 3.1e-12 75.5 107 43.0
FAN21G1585 Fragaria x ananassa HOM05D007507 ORTHO05D009420 4.1e-12 75.1 104 44.2
HanXRQChr04g0113131 Helianthus annuus HOM05D007507 ORTHO05D009420 5.4e-12 74.7 82 52.4
arahy.Tifrunner.gnm1.ann1.26E61A Arachis hypogaea HOM05D007507 ORTHO05D009420 7.0e-12 74.3 85 50.6
FvH4_3g08680 Fragaria vesca HOM05D007507 ORTHO05D009420 7.0e-12 74.3 104 43.3
arahy.Tifrunner.gnm1.ann1.XNU6AG Arachis hypogaea HOM05D007507 ORTHO05D009420 9.1e-12 73.9 85 50.6
Glyma.15G077500 Glycine max HOM05D007507 ORTHO05D009420 1.2e-11 73.6 105 41.9
VMungo0251G0526 Vigna mungo HOM05D007507 ORTHO05D009420 1.2e-11 73.6 106 44.3
RcHm_v2.0_Chr5g0009091 Rosa chinensis HOM05D007507 ORTHO05D009420 1.6e-11 73.2 104 43.3
Prupe.4G051900 Prunus persica HOM05D007507 ORTHO05D009420 2.0e-11 72.8 79 53.2
PGR042G2392 Punica granatum HOM05D007507 ORTHO05D009420 2.0e-11 72.8 85 50.6
Oeu064800.1 Olea europaea HOM05D007507 ORTHO05D009420 2.7e-11 72.4 82 51.2
Cc02_g13780 Coffea canephora HOM05D007507 ORTHO05D009420 3.5e-11 72.0 106 41.5
Medtr4g088390 Medicago truncatula HOM05D007507 ORTHO05D009420 3.5e-11 72.0 90 46.7
Gohir.A09G073500 Gossypium hirsutum HOM05D007507 ORTHO05D009420 4.5e-11 71.6 109 44.0
Phvul.006G182800 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 4.5e-11 71.6 105 42.9
Atru.chr10.1804 Acer truncatum HOM05D007507 ORTHO05D009420 5.9e-11 71.2 89 48.3
arahy.Tifrunner.gnm1.ann1.IERL18 Arachis hypogaea HOM05D007507 ORTHO05D009420 5.9e-11 71.2 95 47.4
arahy.Tifrunner.gnm1.ann1.UCBT0G Arachis hypogaea HOM05D007507 ORTHO05D009420 5.9e-11 71.2 95 47.4
Gohir.D09G073200 Gossypium hirsutum HOM05D007507 ORTHO05D009420 5.9e-11 71.2 94 46.8
Gorai.006G088200 Gossypium raimondii HOM05D007507 ORTHO05D009420 5.9e-11 71.2 94 46.8
SEGI_17757 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 5.9e-11 71.2 77 50.6
FAN11G0818 Fragaria x ananassa HOM05D007507 ORTHO05D009420 7.7e-11 70.9 105 43.8
Glyma.13G236200 Glycine max HOM05D007507 ORTHO05D009420 7.7e-11 70.9 106 42.5
TPR.G19926 Trifolium pratense HOM05D007507 ORTHO05D009420 1.0e-10 70.5 90 46.7
VMungo0540G0304 Vigna mungo HOM05D007507 ORTHO05D009420 1.0e-10 70.5 88 50.0
Phvul.002G232000 Phaseolus vulgaris HOM05D007507 ORTHO05D009420 1.3e-10 70.1 88 46.6
TWI38G1903 Tripterygium wilfordii HOM05D007507 ORTHO05D009420 1.3e-10 70.1 99 46.5
ClCG01G023220 Citrullus lanatus HOM05D007507 ORTHO05D009420 3.8e-10 68.6 80 52.5
Gorai.010G158100 Gossypium raimondii HOM05D007507 ORTHO05D009420 3.8e-10 68.6 98 42.9
MD10G1289800 Malus domestica HOM05D007507 ORTHO05D009420 3.8e-10 68.6 90 44.4
CsaV3_6G050370 Cucumis sativus L. HOM05D007507 ORTHO05D009420 1.1e-09 67.0 77 53.2
Eucgr.E03247 Eucalyptus grandis HOM05D007507 ORTHO05D009420 1.5e-09 66.6 86 44.2
DCAR_008007 Daucus carota HOM05D007507 ORTHO05D009420 4.2e-09 65.1 81 50.6
Migut.H01473 Erythranthe guttata HOM05D007507 ORTHO05D009420 5.5e-09 64.7 78 47.4
Gohir.D06G135900 Gossypium hirsutum HOM05D007507 ORTHO05D009420 7.2e-09 64.3 82 46.3
Hma1.2p1_0558F.1_g178550 Hydrangea macrophylla HOM05D007507 ORTHO05D009420 9.5e-09 63.9 76 48.7
Oeu027697.1 Olea europaea HOM05D007507 ORTHO05D009420 2.8e-08 62.4 82 47.6
PSO339G4025 Papaver somniferum HOM05D003527 ORTHO05D004099 2.8e-08 62.4 72 48.6
ATR0680G191 Amborella trichopoda HOM05D003527 ORTHO05D004099 3.6e-08 62.0 111 35.1
Nitab4.5_0002813g0060 Nicotiana tabacum HOM05D007507 ORTHO05D009420 4.7e-08 61.6 93 41.9
SalBow8G4682 Salvia bowleyana HOM05D007507 ORTHO05D009420 4.7e-08 61.6 79 46.8
SEGI_36970 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 1.0e-07 60.5 71 47.9
PSO384G3887 Papaver somniferum HOM05D003527 ORTHO05D004099 1.8e-07 59.7 68 50.0
Nitab4.5_0007893g0030 Nicotiana tabacum HOM05D007507 ORTHO05D009420 5.2e-07 58.2 103 38.8
SEGI_35508 Sequoiadendron giganteum HOM05D007507 ORTHO05D009420 5.2e-07 58.2 73 46.6
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 1.2e-06 57.0 71 46.5
Duzib093G1072 Durio zibethinus HOM05D003527 ORTHO05D004099 2.6e-06 55.8 67 50.7
HanXRQChr08g0234711 Helianthus annuus HOM05D003527 ORTHO05D004099 3.4e-06 55.5 104 39.4
Oeu024354.1 Olea europaea HOM05D003527 ORTHO05D004099 3.4e-06 55.5 67 47.8
SalBow8G0489 Salvia bowleyana HOM05D007507 ORTHO05D009420 3.4e-06 55.5 67 49.3
Haze_06387 Corylus avellana HOM05D007507 ORTHO05D009420 4.4e-06 55.1 58 51.7
Migut.M01111 Erythranthe guttata HOM05D007507 ORTHO05D009420 4.4e-06 55.1 81 48.1
TAR636G1653 Trochodendron aralioides HOM05D003527 ORTHO05D004099 4.4e-06 55.1 71 46.5
COL.COLO4_14818 Corchorus olitorius HOM05D003527 ORTHO05D004099 5.7e-06 54.7 67 49.3
MBI14_g37823_MAGBIO Magnolia biondii HOM05D003527 ORTHO05D004099 5.7e-06 54.7 73 43.8
Potri.006G084400 Populus trichocarpa HOM05D003527 ORTHO05D004099 5.7e-06 54.7 77 44.2
Sabra09G0021000 Salix brachista HOM05D003527 ORTHO05D004099 5.7e-06 54.7 66 50.0
Actinidia26460 Actinidia chinensis HOM05D003527 ORTHO05D004099 7.5e-06 54.3 73 41.1


User provided reference genes

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