Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3542 Papaver somniferum HOM05D006245 ORTHO05D007260 8.2e-159 563.9 336 100.0
PSO675G9277 Papaver somniferum HOM05D006245 ORTHO05D007260 5.1e-145 518.1 336 94.3
TAR381G0633 Trochodendron aralioides HOM05D006245 ORTHO05D007260 7.9e-37 158.7 322 46.6
Dinv05508 Davidia involucrata HOM05D006245 ORTHO05D007260 1.8e-33 147.5 326 39.0
Actinidia15551 Actinidia chinensis HOM05D006245 ORTHO05D007260 3.1e-33 146.7 320 39.4
Aqoxy6G03039 Aquilegia oxysepala HOM05D006245 ORTHO05D007260 1.7e-31 141.0 159 59.1
Nn6g31596 Nelumbo nucifera HOM05D006245 ORTHO05D007260 2.2e-31 140.6 279 40.1
QL02p016022 Quercus lobata HOM05D006245 ORTHO05D007260 3.2e-30 136.7 266 45.5
CiPaw.07G131600 Carya illinoinensis HOM05D006245 ORTHO05D007260 4.2e-30 136.3 321 36.4
Lsat_1_v5_gn_2_3181 Lactuca sativa HOM05D006245 ORTHO05D007260 3.6e-29 133.3 332 40.4
Ciclev10002005m.g Citrus clementina HOM05D006245 ORTHO05D007260 4.6e-29 132.9 266 40.2
MD06G1002100 Malus domestica HOM05D006245 ORTHO05D007260 7.9e-29 132.1 346 34.4
Medtr1g050502 Medicago truncatula HOM05D006245 ORTHO05D007260 5.1e-28 129.4 153 54.9
Psat6g093400 Pisum sativum HOM05D006245 ORTHO05D007260 6.7e-28 129.0 115 66.1
Hund01813 Selenicereus undatus HOM05D006245 ORTHO05D007260 2.5e-27 127.1 266 46.2
Solyc04g082890.3 Solanum lycopersicum HOM05D006245 ORTHO05D007260 2.5e-27 127.1 341 33.7
Manes.18G001000 Manihot esculenta HOM05D006245 ORTHO05D007260 3.3e-27 126.7 260 40.0
Cpa.g.sc438.4 Carica papaya HOM05D006245 ORTHO05D007260 4.3e-27 126.3 228 43.4
GSVIVG01013443001 Vitis vinifera HOM05D006245 ORTHO05D007260 5.7e-27 125.9 155 56.8
Thecc.08G098200 Theobroma cacao HOM05D006245 ORTHO05D007260 7.4e-27 125.6 280 41.4
CAN.G1330.24 Capsicum annuum HOM05D006245 ORTHO05D007260 9.7e-27 125.2 322 35.7
Manes.18G005000 Manihot esculenta HOM05D006245 ORTHO05D007260 1.3e-26 124.8 260 40.0
Haze_22875 Corylus avellana HOM05D006245 ORTHO05D007260 1.7e-26 124.4 323 38.7
Glyma.02G161100 Glycine max HOM05D006245 ORTHO05D007260 1.7e-26 124.4 268 39.2
FAN04G2011 Fragaria x ananassa HOM05D006245 ORTHO05D007260 2.2e-26 124.0 155 50.3
Lalb_Chr19g0129191 Lupinus albus HOM05D006245 ORTHO05D007260 2.2e-26 124.0 105 65.7
Sopen04g036530 Solanum pennellii HOM05D006245 ORTHO05D007260 2.2e-26 124.0 321 34.0
PGSC0003DMG400010008 Solanum tuberosum HOM05D006245 ORTHO05D007260 2.2e-26 124.0 270 38.1
Gohir.A05G291700 Gossypium hirsutum HOM05D006245 ORTHO05D007260 2.8e-26 123.6 120 62.5
FAN08G3087 Fragaria x ananassa HOM05D006245 ORTHO05D007260 3.7e-26 123.2 155 51.0
PGR083G2384 Punica granatum HOM05D006245 ORTHO05D007260 3.7e-26 123.2 259 39.8
EL10Ac1g01844 Beta vulgaris HOM05D006245 ORTHO05D007260 4.8e-26 122.9 331 35.0
RcHm_v2.0_Chr7g0217321 Rosa chinensis HOM05D006245 ORTHO05D007260 4.8e-26 122.9 155 51.0
Atru.chr13.34 Acer truncatum HOM05D006245 ORTHO05D007260 6.3e-26 122.5 320 40.0
Prupe.5G003000 Prunus persica HOM05D006245 ORTHO05D007260 6.3e-26 122.5 342 38.3
Cc10_g00180 Coffea canephora HOM05D006245 ORTHO05D007260 8.2e-26 122.1 108 66.7
Migut.N02994 Erythranthe guttata HOM05D006245 ORTHO05D007260 8.2e-26 122.1 279 43.0
FAN18G3272 Fragaria x ananassa HOM05D006245 ORTHO05D007260 8.2e-26 122.1 155 49.0
DCAR_017622 Daucus carota HOM05D006245 ORTHO05D007260 1.1e-25 121.7 272 44.5
ECA248G0813 Erigeron canadensis HOM05D004589 ORTHO05D005848 1.1e-25 121.7 163 54.0
CANSAT11G2487 Cannabis sativa HOM05D006245 ORTHO05D007260 1.4e-25 121.3 325 34.8
FvH4_5g26440 Fragaria vesca HOM05D006245 ORTHO05D007260 1.4e-25 121.3 155 49.0
FAN13G0213 Fragaria x ananassa HOM05D006245 ORTHO05D007260 1.4e-25 121.3 155 49.0
Sc02g0009330 Simmondsia chinensis HOM05D006245 ORTHO05D007260 2.4e-25 120.6 272 39.0
Phvul.007G247600 Phaseolus vulgaris HOM05D006245 ORTHO05D007260 5.3e-25 119.4 266 39.5
TPR.G10624 Trifolium pratense HOM05D006245 ORTHO05D007260 2.0e-24 117.5 98 68.4
TWI56G0455 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 2.0e-24 117.5 280 37.1
Cpa.g.c24967.6 Carica papaya HOM05D006245 ORTHO05D007260 2.6e-24 117.1 266 38.3
Sed0007375 Sechium edule HOM05D006245 ORTHO05D007260 2.6e-24 117.1 329 34.3
vmacro21743 Vaccinium macrocarpon HOM05D006245 ORTHO05D007260 2.6e-24 117.1 316 35.4
BcaC07g37450 Brassica carinata HOM05D006245 ORTHO05D007260 3.4e-24 116.7 273 36.3
C08p09220 Brassica napus HOM05D006245 ORTHO05D007260 3.4e-24 116.7 273 36.3
BolC8t47771H Brassica oleracea HOM05D006245 ORTHO05D007260 3.4e-24 116.7 273 36.3
Gohir.D04G005900 Gossypium hirsutum HOM05D006245 ORTHO05D007260 4.5e-24 116.3 138 55.8
BcaB04g17767 Brassica carinata HOM05D006245 ORTHO05D007260 5.9e-24 115.9 285 36.1
arahy.Tifrunner.gnm1.ann1.9KRV5K Arachis hypogaea HOM05D006245 ORTHO05D007260 7.7e-24 115.5 215 41.4
ClCG11G019110 Citrullus lanatus HOM05D006245 ORTHO05D007260 7.7e-24 115.5 296 35.8
Gohir.D05G292800 Gossypium hirsutum HOM05D006245 ORTHO05D007260 7.7e-24 115.5 281 38.1
Gorai.012G007100 Gossypium raimondii HOM05D006245 ORTHO05D007260 7.7e-24 115.5 103 66.0
BraA08t32777Z Brassica rapa HOM05D006245 ORTHO05D007260 1.0e-23 115.2 306 34.6
Gorai.009G309200 Gossypium raimondii HOM05D006245 ORTHO05D007260 1.0e-23 115.2 281 38.1
Lj5g0002209 Lotus japonicus HOM05D006245 ORTHO05D007260 1.0e-23 115.2 261 38.3
CARHR035240 Cardamine hirsuta HOM05D006245 ORTHO05D007260 2.9e-23 113.6 277 37.2
COL.COLO4_03408 Corchorus olitorius HOM05D006245 ORTHO05D007260 2.9e-23 113.6 156 49.4
Migut.O00838 Erythranthe guttata HOM05D006245 ORTHO05D007260 2.9e-23 113.6 287 41.1
SGA_v2.0_scaffold220G42616 Striga asiatica HOM05D006245 ORTHO05D007260 2.9e-23 113.6 305 34.8
MSTRG.22076 Avicennia marina HOM05D006245 ORTHO05D007260 3.8e-23 113.2 330 35.5
CsaV3_4G037700 Cucumis sativus L. HOM05D006245 ORTHO05D007260 3.8e-23 113.2 288 34.7
arahy.Tifrunner.gnm1.ann1.ZHJ1I0 Arachis hypogaea HOM05D006245 ORTHO05D007260 6.5e-23 112.5 214 41.6
A08p07630 Brassica napus HOM05D006245 ORTHO05D007260 6.5e-23 112.5 306 34.3
MBI04_g42540_MAGBIO Magnolia biondii HOM05D006245 ORTHO05D007260 1.4e-22 111.3 332 33.7
DCAR_009857 Daucus carota HOM05D006245 ORTHO05D007260 1.9e-22 110.9 111 57.7
Thhalv10004635m.g Eutrema salsugineum HOM05D006245 ORTHO05D007260 1.9e-22 110.9 289 40.8
MSTRG.24524 Avicennia marina HOM05D006245 ORTHO05D007260 2.5e-22 110.5 265 38.1
MELO3C017064.2 Cucumis melo HOM05D006245 ORTHO05D007260 2.5e-22 110.5 296 33.1
Rhsim06G0001900 Rhododendron simsii HOM05D006245 ORTHO05D007260 2.5e-22 110.5 183 46.4
Cfa014151 Carpinus fangiana HOM05D006245 ORTHO05D007260 5.5e-22 109.4 316 37.0
SalBow6G6430 Salvia bowleyana HOM05D006245 ORTHO05D007260 7.2e-22 109.0 282 36.2
Sp1g32200 Schrenkiella parvula HOM05D006245 ORTHO05D007260 9.4e-22 108.6 275 41.1
Eucgr.F01824 Eucalyptus grandis HOM05D006245 ORTHO05D007260 1.6e-21 107.8 235 42.6
HanXRQChr14g0427941 Helianthus annuus HOM05D006245 ORTHO05D007260 1.6e-21 107.8 158 48.7
ATR0605G375 Amborella trichopoda HOM05D006245 ORTHO05D007260 3.6e-21 106.7 103 64.1
TWI36G0521 Tripterygium wilfordii HOM05D006245 ORTHO05D007260 4.7e-21 106.3 98 66.3
PGR031G1027 Punica granatum HOM05D006245 ORTHO05D007260 6.1e-21 105.9 261 40.6
Potri.005G257900 Populus trichocarpa HOM05D006245 ORTHO05D007260 7.9e-21 105.5 296 43.6
Eucgr.F03612 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.0e-20 103.6 262 47.7
AUR62035186 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.9e-20 103.2 278 34.9
CSS0018800 Camellia sinensis var. sinensis HOM05D006245 ORTHO05D007260 8.8e-20 102.1 237 44.3
Ca_26636_v3 Cicer arietinum L. HOM05D006245 ORTHO05D007260 8.8e-20 102.1 92 67.4
AL1G51480 Arabidopsis lyrata HOM05D006245 ORTHO05D007260 1.1e-19 101.7 266 39.5
CiPaw.08G078200 Carya illinoinensis HOM05D006245 ORTHO05D007260 1.5e-19 101.3 268 41.8
HPP92_003836 Vanilla planifolia HOM05D006245 ORTHO05D007260 3.3e-19 100.1 103 61.2
AT1G42990 Arabidopsis thaliana HOM05D006245 ORTHO05D007260 5.7e-19 99.4 234 45.3
unitig_578.g16243 Utricularia gibba HOM05D006245 ORTHO05D007260 9.7e-19 98.6 161 46.6
Ah.11g042230 Amaranthus hybridus HOM05D006245 ORTHO05D007260 1.7e-18 97.8 310 32.3
AUR62041341 Chenopodium quinoa HOM05D006245 ORTHO05D007260 1.7e-18 97.8 287 34.5
Zm00001eb388050 Zea mays HOM05D006245 ORTHO05D007260 3.7e-18 96.7 138 49.3
Aa31LG6G10010 Aethionema arabicum HOM05D006245 ORTHO05D007260 6.3e-18 95.9 245 44.1
Carub.0001s3439 Capsella rubella HOM05D006245 ORTHO05D007260 8.2e-18 95.5 258 40.7
Eucgr.L02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 2.4e-17 94.0 207 42.5
unitig_8.g4814 Utricularia gibba HOM05D006245 ORTHO05D007260 9.1e-17 92.0 153 45.1
CDE05G2672 Ceratophyllum demersum HOM05D006245 ORTHO05D007260 2.6e-16 90.5 233 34.8
Eucgr.G02751 Eucalyptus grandis HOM05D006245 ORTHO05D007260 3.5e-16 90.1 95 57.9
VMungo0720G1847 Vigna mungo HOM05D006245 ORTHO05D007260 7.7e-16 89.0 319 30.7
Oeu042496.1 Olea europaea HOM05D006245 ORTHO05D007260 2.2e-15 87.4 303 35.6
Duzib114G1035 Durio zibethinus HOM05D006245 ORTHO05D007260 5.0e-15 86.3 242 31.4
Eucgr.F02193 Eucalyptus grandis HOM05D006245 ORTHO05D007260 5.0e-15 86.3 118 51.7
Gorai.006G220700 Gossypium raimondii HOM05D006245 ORTHO05D007260 4.2e-14 83.2 60 70.0
Gohir.A05G409532 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.5e-14 82.8 83 63.9
Gohir.D08G092150 Gossypium hirsutum HOM05D006245 ORTHO05D007260 5.5e-14 82.8 50 80.0
Gorai.004G097700 Gossypium raimondii HOM05D006245 ORTHO05D007260 5.5e-14 82.8 50 80.0
Os06g0622700 Oryza sativa ssp. japonica HOM05D006245 ORTHO05D007260 5.5e-14 82.8 82 58.5
Duzib106G1614 Durio zibethinus HOM05D006245 ORTHO05D007260 1.2e-13 81.6 81 60.5
Peaxi162Scf00385g00068 Petunia axillaris HOM05D006245 ORTHO05D007260 2.1e-13 80.9 293 30.0
THA.LOC104813184 Tarenaya hassleriana HOM05D006245 ORTHO05D007260 1.8e-12 77.8 294 35.7
Sabra05G0199800 Salix brachista HOM05D006245 ORTHO05D007260 1.3e-10 71.6 244 42.6
ECA234G2998 Erigeron canadensis HOM05D006245 ORTHO05D007260 1.8e-09 67.8 199 38.7
Actinidia17088 Actinidia chinensis HOM05D001218 ORTHO05D004088 7.0e-09 65.9 77 55.8
Nitab4.5_0000464g0100 Nicotiana tabacum HOM05D006245 ORTHO05D007260 9.1e-09 65.5 300 33.3
AUR62043321 Chenopodium quinoa HOM05D006245 ORTHO05D007260 3.5e-08 63.5 59 54.2
AUR62033078 Chenopodium quinoa HOM05D000408 ORTHO05D001664 2.9e-07 60.5 51 66.7


User provided reference genes

Program Settings