Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3535 Papaver somniferum HOM05D000371 ORTHO05D003573 8.9e-81 303.5 151 100.0
PSO133G0088 Papaver somniferum HOM05D000371 ORTHO05D003573 8.7e-52 207.2 122 86.9
PSO541G6279 Papaver somniferum HOM05D000371 ORTHO05D003573 1.9e-51 206.1 122 84.4
TAR376G0231 Trochodendron aralioides HOM05D000371 ORTHO05D003573 2.7e-21 105.9 125 48.8
TAR376G0781 Trochodendron aralioides HOM05D000371 ORTHO05D003573 4.7e-21 105.1 125 48.8
Cc07_g15630 Coffea canephora HOM05D000371 ORTHO05D003573 6.3e-18 94.7 122 42.6
MBI02_g19401_MAGBIO Magnolia biondii HOM05D000371 ORTHO05D003573 1.4e-17 93.6 116 43.1
Prupe.6G179400 Prunus persica HOM05D000371 ORTHO05D003573 7.0e-17 91.3 130 47.7
Nn1g05260 Nelumbo nucifera HOM05D000371 ORTHO05D003573 1.2e-16 90.5 124 44.4
GSVIVG01022183001 Vitis vinifera HOM05D000371 ORTHO05D003573 2.6e-16 89.4 122 45.1
Lalb_Chr07g0184971 Lupinus albus HOM05D000371 ORTHO05D003573 1.0e-15 87.4 121 43.0
MELO3C007778.2 Cucumis melo HOM05D000371 ORTHO05D003573 3.8e-15 85.5 122 42.6
Sed0019790 Sechium edule HOM05D000371 ORTHO05D003573 5.0e-15 85.1 122 42.6
Solyc04g054520.3 Solanum lycopersicum HOM05D000371 ORTHO05D003573 5.0e-15 85.1 114 38.6
Sopen04g024340 Solanum pennellii HOM05D000371 ORTHO05D003573 5.0e-15 85.1 114 38.6
Haze_24993 Corylus avellana HOM05D000371 ORTHO05D003573 6.5e-15 84.7 136 41.9
QL06p050463 Quercus lobata HOM05D000371 ORTHO05D003573 6.5e-15 84.7 129 40.3
Lsat_1_v5_gn_5_41561 Lactuca sativa HOM05D000371 ORTHO05D003573 8.5e-15 84.3 87 49.4
Lj4A883G25 Lonicera japonica HOM05D000371 ORTHO05D003573 8.5e-15 84.3 63 58.7
Lj4C880G13 Lonicera japonica HOM05D000371 ORTHO05D003573 8.5e-15 84.3 63 58.7
Lj4g0009095 Lotus japonicus HOM05D000371 ORTHO05D003573 1.1e-14 84.0 67 59.7
PGR004G2425 Punica granatum HOM05D000371 ORTHO05D003573 1.1e-14 84.0 120 42.5
Aqoxy6G00548 Aquilegia oxysepala HOM05D000371 ORTHO05D003573 1.5e-14 83.6 55 69.1
FvH4_1g21630 Fragaria vesca HOM05D000371 ORTHO05D003573 1.5e-14 83.6 88 48.9
FAN23G0210 Fragaria x ananassa HOM05D000371 ORTHO05D003573 1.5e-14 83.6 88 48.9
PGSC0003DMG400022039 Solanum tuberosum HOM05D000371 ORTHO05D003573 2.5e-14 82.8 114 37.7
arahy.Tifrunner.gnm1.ann1.X3NPJM Arachis hypogaea HOM05D000371 ORTHO05D003573 3.2e-14 82.4 101 45.5
arahy.Tifrunner.gnm1.ann1.ZYU4S1 Arachis hypogaea HOM05D000371 ORTHO05D003573 3.2e-14 82.4 101 45.5
HanXRQChr02g0041131 Helianthus annuus HOM05D000371 ORTHO05D003573 3.2e-14 82.4 64 54.7
CANSAT01G2977 Cannabis sativa HOM05D000371 ORTHO05D003573 4.2e-14 82.0 127 39.4
Dinv16317 Davidia involucrata HOM05D000371 ORTHO05D003573 4.2e-14 82.0 122 43.4
FAN26G1706 Fragaria x ananassa HOM05D000371 ORTHO05D003573 4.2e-14 82.0 97 46.4
FAN28G0924 Fragaria x ananassa HOM05D000371 ORTHO05D003573 4.2e-14 82.0 97 47.4
Thhalv10026198m.g Eutrema salsugineum HOM05D000371 ORTHO05D003573 5.5e-14 81.6 120 38.3
AT4G39710 Arabidopsis thaliana HOM05D000371 ORTHO05D003573 7.2e-14 81.3 122 39.3
Cfa002717 Carpinus fangiana HOM05D000371 ORTHO05D003573 7.2e-14 81.3 134 41.8
FAN19G3171 Fragaria x ananassa HOM05D000371 ORTHO05D003573 7.2e-14 81.3 88 47.7
Peaxi162Scf00204g00097 Petunia axillaris HOM05D000371 ORTHO05D003573 7.2e-14 81.3 122 39.3
Thecc.01G107300 Theobroma cacao HOM05D000371 ORTHO05D003573 7.2e-14 81.3 130 37.7
Glyma.08G139100 Glycine max HOM05D000371 ORTHO05D003573 9.4e-14 80.9 115 42.6
RcHm_v2.0_Chr2g0115501 Rosa chinensis HOM05D000371 ORTHO05D003573 9.4e-14 80.9 107 40.2
CSS0002133 Camellia sinensis var. sinensis HOM05D000371 ORTHO05D003573 1.2e-13 80.5 128 42.2
Ca_17712_v3 Cicer arietinum L. HOM05D000371 ORTHO05D003573 1.6e-13 80.1 93 48.4
CsaV3_6G045680 Cucumis sativus L. HOM05D000371 ORTHO05D003573 1.6e-13 80.1 122 40.2
CAN.G727.3 Capsicum annuum HOM05D000371 ORTHO05D003573 2.1e-13 79.7 101 38.6
MD15G1328100 Malus domestica HOM05D000371 ORTHO05D003573 2.1e-13 79.7 73 53.4
BcaNung05544 Brassica carinata HOM05D000371 ORTHO05D003573 2.7e-13 79.3 129 37.2
Potri.005G079700 Populus trichocarpa HOM05D000371 ORTHO05D003573 2.7e-13 79.3 121 40.5
Sabra05G0065400 Salix brachista HOM05D000371 ORTHO05D003573 2.7e-13 79.3 121 40.5
BcaNung00893 Brassica carinata HOM05D000371 ORTHO05D003573 3.6e-13 79.0 76 46.1
CARHR247010 Cardamine hirsuta HOM05D000371 ORTHO05D003573 3.6e-13 79.0 122 38.5
Gohir.A11G199300 Gossypium hirsutum HOM05D000371 ORTHO05D003573 3.6e-13 79.0 72 52.8
Gohir.D11G224900 Gossypium hirsutum HOM05D000371 ORTHO05D003573 3.6e-13 79.0 72 52.8
Gorai.007G242100 Gossypium raimondii HOM05D000371 ORTHO05D003573 3.6e-13 79.0 72 52.8
SalBow5G1508 Salvia bowleyana HOM05D000371 ORTHO05D003573 3.6e-13 79.0 102 43.1
SalBow5G3726 Salvia bowleyana HOM05D000371 ORTHO05D003573 3.6e-13 79.0 102 43.1
VMungo0251G3192 Vigna mungo HOM05D000371 ORTHO05D003573 3.6e-13 79.0 94 46.8
AL7G11910 Arabidopsis lyrata HOM05D000371 ORTHO05D003573 4.7e-13 78.6 122 38.5
C01p00740 Brassica napus HOM05D000371 ORTHO05D003573 4.7e-13 78.6 76 46.1
BolC1t00076H Brassica oleracea HOM05D000371 ORTHO05D003573 4.7e-13 78.6 76 46.1
Aa31LG6G15550 Aethionema arabicum HOM05D000371 ORTHO05D003573 6.1e-13 78.2 122 40.2
ECA246G2647 Erigeron canadensis HOM05D000371 ORTHO05D003573 6.1e-13 78.2 102 42.2
Atru.chr4.246 Acer truncatum HOM05D000371 ORTHO05D003573 8.0e-13 77.8 101 40.6
A01p00600 Brassica napus HOM05D000371 ORTHO05D003573 8.0e-13 77.8 76 46.1
BraA01t00068Z Brassica rapa HOM05D000371 ORTHO05D003573 8.0e-13 77.8 76 46.1
Cpa.g.sc231.3 Carica papaya HOM05D000371 ORTHO05D003573 8.0e-13 77.8 110 45.5
Medtr8g091410 Medicago truncatula HOM05D000371 ORTHO05D003573 8.0e-13 77.8 64 59.4
Phvul.002G262400 Phaseolus vulgaris HOM05D000371 ORTHO05D003573 1.0e-12 77.4 96 44.8
vmacro12938 Vaccinium macrocarpon HOM05D000371 ORTHO05D003573 1.0e-12 77.4 122 36.9
ClCG01G018990 Citrullus lanatus HOM05D000371 ORTHO05D003573 1.4e-12 77.0 100 40.0
Psat7g053080 Pisum sativum HOM05D000371 ORTHO05D003573 1.4e-12 77.0 63 60.3
Duzib264G1096 Durio zibethinus HOM05D000371 ORTHO05D003573 1.8e-12 76.6 66 53.0
Oeu028402.1 Olea europaea HOM05D000371 ORTHO05D003573 2.3e-12 76.3 70 51.4
Rhsim10G0156600 Rhododendron simsii HOM05D000371 ORTHO05D003573 3.0e-12 75.9 125 39.2
Carub.0007s0159 Capsella rubella HOM05D000371 ORTHO05D003573 4.0e-12 75.5 71 49.3
CANSAT56G3388 Cannabis sativa HOM05D007808 ORTHO05D009895 5.2e-12 75.1 77 46.8
CiPaw.04G095600 Carya illinoinensis HOM05D000371 ORTHO05D003573 5.2e-12 75.1 70 52.9
Nitab4.5_0000518g0080 Nicotiana tabacum HOM05D000371 ORTHO05D003573 5.2e-12 75.1 125 35.2
Ciclev10027543m.g Citrus clementina HOM05D000371 ORTHO05D003573 6.7e-12 74.7 70 48.6
Duzib147G0218 Durio zibethinus HOM05D000371 ORTHO05D003573 6.7e-12 74.7 67 50.7
TPR.G2221 Trifolium pratense HOM05D000371 ORTHO05D003573 8.8e-12 74.3 98 46.9
Manes.13G090300 Manihot esculenta HOM05D000371 ORTHO05D003573 1.5e-11 73.6 102 37.3
unitig_747.g21822 Utricularia gibba HOM05D000371 ORTHO05D003573 3.3e-11 72.4 92 46.7
Eucgr.I00381 Eucalyptus grandis HOM05D000371 ORTHO05D003573 4.4e-11 72.0 138 36.2
Sp7g36180 Schrenkiella parvula HOM05D000371 ORTHO05D003573 4.4e-11 72.0 125 36.8
Hma1.2p1_0011F.1_g007100 Hydrangea macrophylla HOM05D000371 ORTHO05D003573 5.7e-11 71.6 136 40.4
COL.COLO4_11054 Corchorus olitorius HOM05D000371 ORTHO05D003573 7.5e-11 71.2 65 52.3
ATR0564G254 Amborella trichopoda HOM05D000371 ORTHO05D003573 9.7e-11 70.9 103 44.7
Nitab4.5_0000214g0120 Nicotiana tabacum HOM05D000371 ORTHO05D003573 9.7e-11 70.9 104 36.5
MSTRG.3797 Avicennia marina HOM05D000371 ORTHO05D003573 1.3e-10 70.5 102 42.2
TWI77G0598 Tripterygium wilfordii HOM05D000371 ORTHO05D003573 1.3e-10 70.5 105 39.0
Migut.L00100 Erythranthe guttata HOM05D000371 ORTHO05D003573 2.8e-10 69.3 71 47.9
Actinidia10887 Actinidia chinensis HOM05D000371 ORTHO05D003573 6.3e-10 68.2 83 43.4
DCAR_014246 Daucus carota HOM05D000371 ORTHO05D003573 8.2e-10 67.8 106 38.7
EL10Ac6g15067 Beta vulgaris HOM05D000371 ORTHO05D003573 2.4e-09 66.2 119 37.0
AUR62003760 Chenopodium quinoa HOM05D000371 ORTHO05D003573 2.0e-08 63.2 102 39.2
Zm00001eb255120 Zea mays HOM05D000371 ORTHO05D003573 1.0e-07 60.8 65 49.2
AUR62002037 Chenopodium quinoa HOM05D000371 ORTHO05D003573 2.2e-07 59.7 101 36.6
Os02g0751600 Oryza sativa ssp. japonica HOM05D000371 ORTHO05D003573 3.8e-07 58.9 65 47.7
Nn5g29005 Nelumbo nucifera HOM05D002551 ORTHO05D002832 9.4e-06 54.3 43 58.1


User provided reference genes

Program Settings