Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 1.9e-68 262.7 168 100.0
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 1.6e-54 216.5 248 61.3
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 4.0e-37 158.7 197 48.2
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 3.5e-33 145.6 248 40.7
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 1.7e-32 143.3 247 38.9
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 2.2e-32 142.9 246 40.2
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 3.8e-32 142.1 248 39.9
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 1.9e-31 139.8 251 39.0
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 1.9e-31 139.8 248 40.3
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 2.5e-31 139.4 249 39.4
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 4.2e-31 138.7 246 38.6
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 7.2e-31 137.9 248 41.1
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 9.4e-31 137.5 245 38.8
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 1.2e-30 137.1 246 38.2
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.2e-30 137.1 247 38.9
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.6e-30 136.7 248 39.9
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 2.7e-30 136.0 248 37.9
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 3.6e-30 135.6 246 38.6
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.6e-30 135.6 246 38.6
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 3.6e-30 135.6 246 38.6
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 3.6e-30 135.6 248 37.5
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 4.7e-30 135.2 251 39.0
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 4.7e-30 135.2 249 40.2
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 6.1e-30 134.8 246 38.6
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 8.0e-30 134.4 248 37.5
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 8.0e-30 134.4 248 38.7
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 1.0e-29 134.0 248 38.3
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 1.0e-29 134.0 246 37.8
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 1.4e-29 133.7 249 38.2
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 1.4e-29 133.7 248 38.3
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.4e-29 133.7 249 39.8
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 1.4e-29 133.7 246 39.4
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 1.4e-29 133.7 251 38.2
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 2.3e-29 132.9 246 37.8
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 5.2e-29 131.7 246 38.6
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 5.2e-29 131.7 246 41.1
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 5.2e-29 131.7 247 39.7
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 8.8e-29 131.0 246 37.0
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 1.2e-28 130.6 274 36.1
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 1.2e-28 130.6 248 37.5
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 1.2e-28 130.6 245 37.1
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.5e-28 130.2 246 37.4
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 1.5e-28 130.2 245 37.1
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 2.0e-28 129.8 248 37.1
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 2.0e-28 129.8 249 36.5
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 2.6e-28 129.4 251 36.3
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 3.4e-28 129.0 251 37.5
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 3.4e-28 129.0 248 36.7
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 3.4e-28 129.0 248 37.1
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 5.7e-28 128.3 246 37.0
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 5.7e-28 128.3 244 37.3
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 5.7e-28 128.3 246 37.4
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 7.5e-28 127.9 248 36.7
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 7.5e-28 127.9 248 37.5
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 1.3e-27 127.1 241 36.9
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 1.3e-27 127.1 251 36.3
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 1.3e-27 127.1 245 35.9
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 1.3e-27 127.1 242 38.8
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 1.3e-27 127.1 243 37.9
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 1.7e-27 126.7 248 41.5
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 1.7e-27 126.7 191 45.5
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 1.7e-27 126.7 247 38.1
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 2.2e-27 126.3 251 35.9
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 2.2e-27 126.3 249 36.9
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 2.2e-27 126.3 248 36.3
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 2.2e-27 126.3 251 36.3
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 2.8e-27 125.9 243 36.2
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 2.8e-27 125.9 245 35.9
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 3.7e-27 125.6 241 44.8
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 3.7e-27 125.6 250 36.8
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 4.8e-27 125.2 248 36.7
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 6.3e-27 124.8 248 36.3
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 8.3e-27 124.4 243 35.8
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 1.4e-26 123.6 235 38.3
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 1.4e-26 123.6 248 35.9
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 1.4e-26 123.6 239 36.8
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 1.4e-26 123.6 243 35.4
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 2.4e-26 122.9 243 36.2
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 2.4e-26 122.9 248 36.3
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 3.1e-26 122.5 243 34.6
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 3.1e-26 122.5 243 35.8
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 3.1e-26 122.5 243 35.8
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 3.1e-26 122.5 243 35.8
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 4.1e-26 122.1 248 36.7
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 5.4e-26 121.7 247 35.2
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 5.4e-26 121.7 244 35.7
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 9.1e-26 120.9 243 35.4
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 9.1e-26 120.9 243 35.4
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 9.1e-26 120.9 245 38.0
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 1.2e-25 120.6 243 42.8
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 1.2e-25 120.6 248 35.9
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 2.0e-25 119.8 248 36.7
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 2.0e-25 119.8 246 36.2
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 3.5e-25 119.0 220 40.0
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 3.5e-25 119.0 248 32.7
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 4.5e-25 118.6 243 34.6
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 5.9e-25 118.2 221 39.8
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 1.0e-24 117.5 278 33.5
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 1.0e-24 117.5 243 34.2
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 1.0e-24 117.5 291 32.0
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 1.7e-24 116.7 245 40.0
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 3.8e-24 115.5 243 35.4
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 5.0e-24 115.2 222 37.8
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 6.5e-24 114.8 279 36.2
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 1.5e-23 113.6 246 33.3
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 5.5e-23 111.7 237 33.3
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 4.7e-22 108.6 246 30.1
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 1.4e-21 107.1 249 31.7
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 5.2e-21 105.1 162 40.7
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 6.8e-21 104.8 75 66.7
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 3.4e-20 102.4 244 34.0
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 4.4e-20 102.1 161 38.5
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 5.7e-20 101.7 240 32.1
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 2.2e-19 99.8 56 80.4
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 2.2e-19 99.8 56 82.1
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 2.8e-19 99.4 69 72.5
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.1e-18 97.4 162 37.7
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 4.1e-18 95.5 56 78.6
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.6e-17 93.6 51 82.4
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 4.5e-17 92.0 239 28.5
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 7.3e-15 84.7 54 66.7
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.8e-13 80.1 43 83.7
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 1.1e-10 70.9 234 27.4
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 1.4e-10 70.5 119 47.9
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 2.4e-10 69.7 38 81.6
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 5.4e-10 68.6 49 61.2
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 2.0e-09 66.6 70 45.7
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 1.7e-08 63.5 236 26.3
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 1.1e-07 60.8 38 68.4
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 5.6e-07 58.5 251 23.9
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 7.3e-07 58.2 114 36.8
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 2.1e-06 56.6 155 31.6
QL10p020720 Quercus lobata HOM05D005618 ORTHO05D337099 3.6e-06 55.8 49 59.2
Cpa.g.sc246.8 Carica papaya HOM05D005618 ORTHO05D118306 8.0e-06 54.7 36 77.8


User provided reference genes

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