Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3414 Papaver somniferum HOM05D004249 ORTHO05D005015 1.6e-108 396.0 185 100.0
PSO675G5594 Papaver somniferum HOM05D004249 ORTHO05D005015 5.1e-94 347.8 195 86.2
PSO675G8665 Papaver somniferum HOM05D004249 ORTHO05D005015 2.6e-90 335.5 193 83.9
PSO541G6333 Papaver somniferum HOM05D004249 ORTHO05D005015 5.4e-80 301.2 201 72.1
PSO675G1470 Papaver somniferum HOM05D004249 ORTHO05D005015 1.6e-79 299.7 192 75.0
PSO675G2958 Papaver somniferum HOM05D004249 ORTHO05D005015 2.1e-79 299.3 202 71.3
PSO675G2456 Papaver somniferum HOM05D004249 ORTHO05D005015 6.6e-78 294.3 200 71.0
PSO541G3219 Papaver somniferum HOM05D004249 ORTHO05D005015 2.1e-76 289.3 201 70.1
PSO541G5503 Papaver somniferum HOM05D004249 ORTHO05D005015 3.0e-70 268.9 182 70.3
Ciclev10024361m.g Citrus clementina HOM05D004249 ORTHO05D005015 1.6e-63 246.5 200 57.0
MD15G1143500 Malus domestica HOM05D004249 ORTHO05D005015 3.5e-63 245.4 200 58.0
Manes.01G010300 Manihot esculenta HOM05D004249 ORTHO05D005015 3.5e-63 245.4 200 58.5
Haze_11142 Corylus avellana HOM05D004249 ORTHO05D005015 6.0e-63 244.6 200 57.5
Aqoxy5G00067 Aquilegia oxysepala HOM05D004249 ORTHO05D005015 7.9e-63 244.2 192 61.5
Prupe.7G269600 Prunus persica HOM05D004249 ORTHO05D005015 1.0e-62 243.8 190 60.0
Sopen08g005580 Solanum pennellii HOM05D004249 ORTHO05D005015 1.0e-62 243.8 200 56.0
Solyc08g014600.4 Solanum lycopersicum HOM05D004249 ORTHO05D005015 1.3e-62 243.4 200 56.0
Peaxi162Scf01205g00038 Petunia axillaris HOM05D004249 ORTHO05D005015 1.8e-62 243.0 200 56.5
Actinidia34567 Actinidia chinensis HOM05D004249 ORTHO05D005015 2.3e-62 242.7 200 57.5
Potri.017G007000 Populus trichocarpa HOM05D004249 ORTHO05D005015 2.3e-62 242.7 200 56.5
Cfa008510 Carpinus fangiana HOM05D004249 ORTHO05D005015 3.0e-62 242.3 200 56.5
PGSC0003DMG400025227 Solanum tuberosum HOM05D004249 ORTHO05D005015 3.0e-62 242.3 200 55.5
Haze_11140 Corylus avellana HOM05D004249 ORTHO05D005015 5.1e-62 241.5 200 56.5
Cpa.g.sc151.2 Carica papaya HOM05D004249 ORTHO05D005015 2.5e-61 239.2 189 60.3
PGR042G1833 Punica granatum HOM05D004249 ORTHO05D005015 2.5e-61 239.2 200 57.5
Hma1.2p1_0872F.1_g231130 Hydrangea macrophylla HOM05D004249 ORTHO05D005015 3.3e-61 238.8 192 56.8
GSVIVG01038246001 Vitis vinifera HOM05D004249 ORTHO05D005015 3.3e-61 238.8 200 56.0
Cpa.g.sc151.3 Carica papaya HOM05D004249 ORTHO05D005015 4.3e-61 238.4 200 56.0
CAN.G607.4 Capsicum annuum HOM05D004249 ORTHO05D005015 1.3e-60 236.9 200 55.0
Cc03_g16020 Coffea canephora HOM05D004249 ORTHO05D005015 2.8e-60 235.7 200 57.0
MBI10_g45897_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 3.7e-60 235.3 190 58.9
Eucgr.A00430 Eucalyptus grandis HOM05D004249 ORTHO05D005015 1.1e-59 233.8 200 56.0
QL10p064195 Quercus lobata HOM05D004249 ORTHO05D005015 1.4e-59 233.4 199 56.3
RcHm_v2.0_Chr2g0084541 Rosa chinensis HOM05D004249 ORTHO05D005015 3.1e-59 232.3 192 58.3
Duzib093G0712 Durio zibethinus HOM05D004249 ORTHO05D005015 4.0e-59 231.9 200 55.0
Gorai.006G186800 Gossypium raimondii HOM05D004249 ORTHO05D005015 4.0e-59 231.9 200 55.0
GSVIVG01038247001 Vitis vinifera HOM05D004249 ORTHO05D005015 4.0e-59 231.9 200 55.0
Atru.chr3.2004 Acer truncatum HOM05D004249 ORTHO05D005015 2.0e-58 229.6 200 53.0
Cpa.g.sc151.4 Carica papaya HOM05D004249 ORTHO05D005015 2.0e-58 229.6 200 56.0
AUR62002468 Chenopodium quinoa HOM05D004249 ORTHO05D005015 2.0e-58 229.6 216 50.0
TAR633G0865 Trochodendron aralioides HOM05D004249 ORTHO05D005015 2.0e-58 229.6 190 56.8
BcaB06g29506 Brassica carinata HOM05D004249 ORTHO05D005015 2.6e-58 229.2 197 55.8
Thecc.05G001900 Theobroma cacao HOM05D004249 ORTHO05D005015 7.6e-58 227.6 200 54.0
BcaC02g07143 Brassica carinata HOM05D004249 ORTHO05D005015 1.0e-57 227.3 197 55.3
C04p70820 Brassica napus HOM05D004249 ORTHO05D005015 1.3e-57 226.9 196 56.1
Sp4g26000 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.3e-57 226.9 197 55.8
Aa31LG1G25620 Aethionema arabicum HOM05D004249 ORTHO05D005015 1.7e-57 226.5 193 56.5
Dinv24754 Davidia involucrata HOM05D004249 ORTHO05D005015 1.7e-57 226.5 190 56.3
BcaC02g12353 Brassica carinata HOM05D004249 ORTHO05D005015 2.9e-57 225.7 197 54.8
C04p04840 Brassica napus HOM05D004249 ORTHO05D005015 2.9e-57 225.7 197 54.8
Migut.G00862 Erythranthe guttata HOM05D004249 ORTHO05D005015 3.8e-57 225.3 190 56.3
Carub.0004s2650 Capsella rubella HOM05D004249 ORTHO05D005015 6.5e-57 224.6 200 53.0
FvH4_1g00240 Fragaria vesca HOM05D004249 ORTHO05D005015 6.5e-57 224.6 190 57.4
FAN26G1858 Fragaria x ananassa HOM05D004249 ORTHO05D005015 6.5e-57 224.6 192 56.2
THA.LOC104804252 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 6.5e-57 224.6 202 54.0
unitig_0.g2413 Utricularia gibba HOM05D004249 ORTHO05D005015 6.5e-57 224.6 200 53.5
A05p04060 Brassica napus HOM05D004249 ORTHO05D005015 8.4e-57 224.2 194 55.2
CARHR139110 Cardamine hirsuta HOM05D004249 ORTHO05D005015 8.4e-57 224.2 200 53.5
MSTRG.9267 Avicennia marina HOM05D004249 ORTHO05D005015 1.1e-56 223.8 201 52.2
CARHR139100 Cardamine hirsuta HOM05D004249 ORTHO05D005015 1.9e-56 223.0 196 55.1
CDE07G0873 Ceratophyllum demersum HOM05D004249 ORTHO05D005015 1.9e-56 223.0 200 53.0
Thhalv10001619m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 1.9e-56 223.0 201 52.2
AT2G43940 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 5.5e-56 221.5 200 53.0
SalBow3G0617 Salvia bowleyana HOM05D004249 ORTHO05D005015 5.5e-56 221.5 190 54.7
AL4G42810 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 1.6e-55 219.9 192 54.7
Sp4g26010 Schrenkiella parvula HOM05D004249 ORTHO05D005015 2.1e-55 219.5 200 53.5
Aa31LG1G25630 Aethionema arabicum HOM05D004249 ORTHO05D005015 2.7e-55 219.2 201 51.2
Thhalv10001612m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 2.7e-55 219.2 196 54.6
Sed0024580 Sechium edule HOM05D004249 ORTHO05D005015 4.6e-55 218.4 200 52.5
AT2G43910 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 7.9e-55 217.6 197 53.8
QL10p064299 Quercus lobata HOM05D000004 ORTHO05D000002 1.3e-54 216.9 180 57.8
SEGI_12768 Sequoiadendron giganteum HOM05D004249 ORTHO05D005015 1.3e-54 216.9 199 50.3
CiPaw.01G201200 Carya illinoinensis HOM05D004249 ORTHO05D005015 1.8e-54 216.5 181 57.5
THA.LOC104802342 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.3e-54 216.1 192 54.2
Carub.0004s2647 Capsella rubella HOM05D004249 ORTHO05D005015 3.0e-54 215.7 197 53.8
DCAR_027496 Daucus carota HOM05D004249 ORTHO05D005015 3.0e-54 215.7 185 56.2
Sabra17G0007900 Salix brachista HOM05D001637 ORTHO05D002178 3.0e-54 215.7 180 56.1
AL4G42780 Arabidopsis lyrata HOM05D004249 ORTHO05D005015 3.9e-54 215.3 197 52.8
SGA_v2.0_scaffold37G14935 Striga asiatica HOM05D004249 ORTHO05D005015 5.1e-54 214.9 189 53.4
vmacro05005 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 5.1e-54 214.9 200 53.0
AT2G43920 Arabidopsis thaliana HOM05D004249 ORTHO05D005015 8.7e-54 214.2 200 51.0
A04p33130 Brassica napus HOM05D004249 ORTHO05D005015 8.7e-54 214.2 200 51.0
PSO541G0314 Papaver somniferum HOM05D004249 ORTHO05D005015 8.7e-54 214.2 151 70.9
AUR62023721 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.5e-53 213.4 187 54.0
Sp4g26030 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.5e-53 213.4 201 50.7
Carub.0004s2648 Capsella rubella HOM05D004249 ORTHO05D005015 3.3e-53 212.2 200 51.0
Oeu064015.2 Olea europaea HOM05D004249 ORTHO05D005015 3.3e-53 212.2 190 50.5
BraA04t18772Z Brassica rapa HOM05D004249 ORTHO05D005015 4.3e-53 211.8 200 50.5
CsaV3_4G029860 Cucumis sativus L. HOM05D004249 ORTHO05D005015 5.7e-53 211.5 201 52.7
ATR0743G017 Amborella trichopoda HOM05D004249 ORTHO05D005015 9.6e-53 210.7 199 50.8
BolC4t28584H Brassica oleracea HOM05D004249 ORTHO05D005015 9.6e-53 210.7 187 54.5
BcaC02g07142 Brassica carinata HOM05D004249 ORTHO05D005015 1.6e-52 209.9 200 50.0
BolC4t28585H Brassica oleracea HOM05D004249 ORTHO05D005015 1.6e-52 209.9 200 50.0
BraA04t18771Z Brassica rapa HOM05D004249 ORTHO05D005015 1.6e-52 209.9 187 54.5
A04p33120 Brassica napus HOM05D004249 ORTHO05D005015 2.8e-52 209.1 184 54.9
THA.LOC104804276 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 4.8e-52 208.4 200 50.0
AUR62002469 Chenopodium quinoa HOM05D004249 ORTHO05D005015 8.2e-52 207.6 190 51.6
FAN28G1175 Fragaria x ananassa HOM05D004249 ORTHO05D005015 8.2e-52 207.6 181 56.4
Sp4g26020 Schrenkiella parvula HOM05D004249 ORTHO05D005015 1.1e-51 207.2 192 50.5
Os06g0153900 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 3.1e-51 205.7 190 52.1
Hund12312 Selenicereus undatus HOM05D004249 ORTHO05D005015 5.3e-51 204.9 199 48.2
EL10Ac3g06159 Beta vulgaris HOM05D004249 ORTHO05D005015 6.9e-51 204.5 202 49.0
C04p70830 Brassica napus HOM05D004249 ORTHO05D005015 6.9e-51 204.5 200 49.0
Thhalv10019674m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 6.9e-51 204.5 187 52.9
BraA05t19394Z Brassica rapa HOM05D004249 ORTHO05D005015 1.2e-50 203.8 184 53.3
Lj6A284T20 Lonicera japonica HOM05D004249 ORTHO05D005015 2.6e-50 202.6 235 44.7
QL10p064222 Quercus lobata HOM05D000009 ORTHO05D000116 4.5e-50 201.8 193 51.8
BcaB02g08894 Brassica carinata HOM05D004249 ORTHO05D005015 7.6e-50 201.1 201 50.2
CSS0044272 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 7.6e-50 201.1 170 58.2
BcaB06g29508 Brassica carinata HOM05D004249 ORTHO05D005015 6.5e-49 198.0 188 51.1
BcaB02g08889 Brassica carinata HOM05D004249 ORTHO05D005015 2.1e-47 193.0 209 48.3
A05p04090 Brassica napus HOM05D004249 ORTHO05D005015 2.1e-47 193.0 193 48.2
BraA05t19396Z Brassica rapa HOM05D004249 ORTHO05D005015 2.1e-47 193.0 193 48.2
BcaC02g12352 Brassica carinata HOM05D004249 ORTHO05D005015 2.7e-47 192.6 193 48.2
C04p04870 Brassica napus HOM05D004249 ORTHO05D005015 2.7e-47 192.6 193 48.2
BolC4t22117H Brassica oleracea HOM05D004249 ORTHO05D005015 2.7e-47 192.6 193 48.2
BcaB06g29349 Brassica carinata HOM05D004249 ORTHO05D005015 7.9e-47 191.0 184 49.5
C04p04860 Brassica napus HOM05D004249 ORTHO05D005015 2.3e-46 189.5 259 41.3
SMO144G0018 Selaginella moellendorffii HOM05D004249 ORTHO05D005015 2.5e-45 186.0 191 47.1
Os03g0843800 Oryza sativa ssp. japonica HOM05D004249 ORTHO05D005015 4.3e-45 185.3 201 47.8
BolC4t22116H Brassica oleracea HOM05D004249 ORTHO05D005015 1.3e-44 183.7 196 48.0
TWI15G0032 Tripterygium wilfordii HOM05D004249 ORTHO05D005015 1.3e-44 183.7 200 45.0
FAN23G1087 Fragaria x ananassa HOM05D004249 ORTHO05D005015 2.8e-44 182.6 210 47.1
Gohir.D09G165000 Gossypium hirsutum HOM05D004249 ORTHO05D005015 6.3e-44 181.4 181 50.3
Nitab4.5_0000013g0070 Nicotiana tabacum HOM05D004249 ORTHO05D005015 2.4e-43 179.5 184 48.9
Nitab4.5_0007944g0050 Nicotiana tabacum HOM05D004249 ORTHO05D005015 2.4e-43 179.5 184 49.5
BcaB02g08886 Brassica carinata HOM05D004249 ORTHO05D005015 3.4e-42 175.6 178 49.4
Mapoly0115s0024 Marchantia polymorpha HOM05D004249 ORTHO05D005015 1.3e-41 173.7 200 42.5
BcaB06g29507 Brassica carinata HOM05D004249 ORTHO05D005015 8.5e-41 171.0 180 48.9
BcaB02g08885 Brassica carinata HOM05D004249 ORTHO05D005015 1.4e-40 170.2 200 44.5
BcaB02g08891 Brassica carinata HOM05D004249 ORTHO05D005015 5.5e-40 168.3 180 50.0
AagrBONN_evm.TU.Sc2ySwM_117.2259 Anthoceros agrestis HOM05D004249 ORTHO05D005015 1.4e-38 163.7 190 45.3
Gohir.A09G169300 Gossypium hirsutum HOM05D004249 ORTHO05D005015 1.1e-35 154.1 148 49.3
Nn1g09449 Nelumbo nucifera HOM05D004249 ORTHO05D005015 2.4e-35 152.9 144 52.1
HPP92_011584 Vanilla planifolia HOM05D004249 ORTHO05D005015 5.9e-34 148.3 144 51.4
CSS0037089 Camellia sinensis var. sinensis HOM05D004249 ORTHO05D005015 1.7e-33 146.7 152 51.3
Pp3c2_32550 Physcomitrium patens HOM05D004249 ORTHO05D005015 1.4e-32 143.7 184 40.2
COL.COLO4_14412 Corchorus olitorius HOM05D001637 ORTHO05D002178 2.1e-31 139.8 164 44.5
BolC4t22114H Brassica oleracea HOM05D004249 ORTHO05D005015 3.7e-28 129.0 92 62.0
ClCG04G002900 Citrullus lanatus HOM05D004249 ORTHO05D005015 2.6e-26 122.9 232 36.6
C02p63480 Brassica napus HOM05D004249 ORTHO05D005015 3.5e-26 122.5 153 44.4
C09p12990 Brassica napus HOM05D004249 ORTHO05D024151 2.2e-25 119.8 153 43.8
BolC8t49376H Brassica oleracea HOM05D004249 ORTHO05D005015 2.2e-25 119.8 153 43.8
COL.COLO4_19904 Corchorus olitorius HOM05D004249 ORTHO05D005015 9.4e-24 114.4 112 51.8
BolC7t41877H Brassica oleracea HOM05D004249 ORTHO05D005015 1.2e-23 114.0 161 42.2
THA.LOC104824126 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 3.6e-23 112.5 116 50.0
THA.LOC104824119 Tarenaya hassleriana HOM05D004249 ORTHO05D005015 2.0e-21 106.7 81 54.3
MCO07G181 Micromonas commoda HOM05D004249 ORTHO05D005015 4.4e-21 105.5 203 34.5
MELO3C033208.2 Cucumis melo HOM05D004249 ORTHO05D005015 3.7e-20 102.4 81 56.8
MBI10_g23575_MAGBIO Magnolia biondii HOM05D004249 ORTHO05D005015 4.8e-20 102.1 59 71.2
PRCOL_00002738 Prasinoderma coloniale HOM05D004249 ORTHO05D005015 4.8e-20 102.1 198 32.3
HPP92_011580 Vanilla planifolia HOM05D004249 ORTHO05D005015 6.3e-20 101.7 68 63.2
SGA_v2.0_scaffold37G14917 Striga asiatica HOM05D004249 ORTHO05D005015 4.1e-19 99.0 143 42.7
HPP92_011579 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.2e-18 97.4 76 61.8
Thhalv10001708m.g Eutrema salsugineum HOM05D004249 ORTHO05D005015 1.3e-17 94.0 69 60.9
EL10Ac3g06161 Beta vulgaris HOM05D004249 ORTHO05D005015 1.5e-16 90.5 129 40.3
Cre04.g215600 Chlamydomonas reinhardtii HOM05D004249 ORTHO05D005015 1.5e-16 90.5 211 30.3
Nn1g09453 Nelumbo nucifera HOM05D004249 ORTHO05D005015 2.1e-15 86.7 52 65.4
C03p29320 Brassica napus HOM05D004249 ORTHO05D005015 6.1e-15 85.1 129 38.0
BolC3t15278H Brassica oleracea HOM05D004249 ORTHO05D005015 6.1e-15 85.1 129 38.0
HPP92_011581 Vanilla planifolia HOM05D004249 ORTHO05D005015 1.4e-14 84.0 55 58.2
C08p17510 Brassica napus HOM05D004249 ORTHO05D005015 1.5e-13 80.5 60 60.0
AUR62023720 Chenopodium quinoa HOM05D004249 ORTHO05D005015 1.7e-12 77.0 96 41.7
C08p48990 Brassica napus HOM05D004249 ORTHO05D005015 4.8e-12 75.5 60 58.3
vmacro00720 Vaccinium macrocarpon HOM05D004249 ORTHO05D005015 1.2e-10 70.9 85 42.4
FAN23G1236 Fragaria x ananassa HOM05D004249 ORTHO05D005015 1.1e-08 64.3 39 71.8


User provided reference genes

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