Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 2.8e-106 388.7 202 100.0
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 2.4e-105 385.6 202 99.0
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 1.7e-58 229.9 200 61.0
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 2.4e-57 226.1 200 61.0
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 6.0e-56 221.5 200 60.0
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 3.9e-55 218.8 200 58.0
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 8.6e-55 217.6 200 57.0
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 4.3e-54 215.3 200 56.0
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 5.6e-54 214.9 200 58.0
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 1.2e-53 213.8 200 58.5
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 1.2e-53 213.8 200 59.0
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 3.6e-53 212.2 200 56.0
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 3.6e-53 212.2 200 56.0
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 6.2e-53 211.5 200 59.0
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 6.2e-53 211.5 202 54.0
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 8.1e-53 211.1 200 55.0
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 8.1e-53 211.1 202 55.4
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 1.1e-52 210.7 205 53.2
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 1.4e-52 210.3 200 58.5
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 2.3e-52 209.5 202 55.9
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.3e-52 209.5 202 54.0
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 1.2e-51 207.2 200 56.0
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 2.0e-51 206.5 201 57.2
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 7.6e-51 204.5 200 53.5
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 7.6e-51 204.5 200 55.5
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 9.9e-51 204.1 202 53.5
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 1.7e-50 203.4 200 54.0
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 3.7e-50 202.2 200 55.0
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 6.4e-50 201.4 202 54.0
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 1.1e-49 200.7 203 52.7
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 1.4e-49 200.3 201 55.7
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 1.4e-49 200.3 200 52.5
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 4.1e-49 198.7 187 56.7
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 5.4e-49 198.4 200 52.5
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 5.4e-49 198.4 200 52.5
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 7.1e-49 198.0 202 53.5
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 7.1e-49 198.0 200 53.0
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 9.2e-49 197.6 200 52.5
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 9.2e-49 197.6 200 52.0
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 4.6e-48 195.3 207 52.7
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 1.3e-47 193.7 200 52.0
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 1.7e-47 193.4 200 56.0
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 3.9e-47 192.2 206 50.0
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 1.9e-46 189.9 202 51.0
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 1.9e-46 189.9 200 51.5
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 2.5e-46 189.5 200 51.0
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 5.6e-46 188.3 187 57.2
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 7.3e-46 188.0 206 49.0
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 9.6e-46 187.6 187 56.7
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 1.2e-45 187.2 200 51.0
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 1.2e-45 187.2 202 52.0
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 1.2e-45 187.2 200 51.0
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 3.6e-45 185.7 200 53.0
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 4.7e-45 185.3 188 52.1
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.1e-44 184.1 197 50.3
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 1.1e-44 184.1 192 49.0
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 1.8e-44 183.3 198 49.0
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 1.8e-44 183.3 182 53.3
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 2.4e-44 183.0 196 52.6
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 2.4e-44 183.0 200 48.5
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 6.8e-44 181.4 200 50.0
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 1.2e-43 180.6 200 50.5
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 5.8e-43 178.3 196 51.5
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 5.8e-43 178.3 187 54.0
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 1.3e-42 177.2 165 55.2
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 1.7e-42 176.8 200 49.5
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 2.2e-42 176.4 188 50.5
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 6.4e-42 174.9 199 46.7
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 1.1e-41 174.1 187 51.3
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 1.9e-41 173.3 200 46.5
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 4.2e-41 172.2 239 43.9
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 5.4e-41 171.8 187 50.3
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 5.4e-41 171.8 202 47.5
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 1.6e-40 170.2 202 45.5
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 3.5e-40 169.1 202 45.5
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 3.5e-40 169.1 187 50.8
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 4.6e-40 168.7 202 45.0
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 4.6e-40 168.7 202 46.5
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 6.0e-40 168.3 200 47.0
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 7.8e-40 167.9 200 47.0
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 1.7e-39 166.8 187 49.7
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 3.0e-39 166.0 262 41.2
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 1.5e-38 163.7 187 49.2
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 9.6e-38 161.0 183 49.2
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 2.8e-37 159.5 202 44.1
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 6.2e-37 158.3 163 54.0
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 6.2e-37 158.3 189 46.6
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 1.1e-36 157.5 202 43.6
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 1.4e-36 157.1 202 44.1
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.8e-36 156.8 234 40.6
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 5.3e-36 155.2 146 57.5
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 9.9e-35 151.0 206 41.3
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 2.2e-34 149.8 157 51.0
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 3.8e-34 149.1 159 50.3
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 5.4e-33 145.2 199 41.7
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 2.1e-32 143.3 154 53.9
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 5.1e-31 138.7 169 46.7
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 5.1e-31 138.7 156 48.1
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 9.6e-30 134.4 141 51.8
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 3.6e-29 132.5 195 39.0
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 8.1e-29 131.3 189 42.9
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 1.2e-27 127.5 111 58.6
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 1.5e-27 127.1 148 50.0
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 2.6e-27 126.3 187 41.2
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.1e-25 120.9 118 55.1
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 4.2e-25 119.0 146 45.2
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.6e-21 107.1 116 50.9
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.5e-19 100.5 90 60.0
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 7.6e-19 98.2 108 44.4
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 1.7e-18 97.1 193 33.7
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 6.5e-18 95.1 121 44.6
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 8.4e-18 94.7 85 56.5
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 1.4e-17 94.0 146 39.0
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.5e-17 93.2 147 39.5
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 1.2e-16 90.9 145 37.9
Cfa015562 Carpinus fangiana HOM05D006640 ORTHO05D008078 2.7e-16 89.7 186 31.2
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 1.0e-15 87.8 102 48.0
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 1.1e-14 84.3 107 40.2
RcHm_v2.0_Chr3g0481391 Rosa chinensis HOM05D006640 ORTHO05D008078 3.3e-14 82.8 85 52.9
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 4.3e-14 82.4 169 33.1
vmacro03672 Vaccinium macrocarpon HOM05D002991 ORTHO05D003480 6.1e-08 62.0 48 60.4
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 5.1e-07 58.9 60 46.7
Aqoxy2G03351 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 7.4e-06 55.1 58 55.2


User provided reference genes

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