Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3363 Papaver somniferum HOM05D006157 ORTHO05D007826 1.5e-124 449.5 232 100.0
PSO675G5393 Papaver somniferum HOM05D006157 ORTHO05D007826 3.2e-98 362.1 330 64.2
TAR628G1181 Trochodendron aralioides HOM05D006157 ORTHO05D007826 2.0e-39 166.8 217 52.1
Nn5g30225 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.1e-33 146.7 221 48.9
Nn1g05836 Nelumbo nucifera HOM05D006157 ORTHO05D007826 2.5e-29 133.3 215 42.3
Dinv35975 Davidia involucrata HOM05D006157 ORTHO05D007826 3.2e-29 132.9 223 44.8
CSS0004131 Camellia sinensis var. sinensis HOM05D006157 ORTHO05D007826 4.2e-29 132.5 222 43.2
Hma1.2p1_0718F.1_g208450 Hydrangea macrophylla HOM05D006157 ORTHO05D007826 6.0e-28 128.6 222 39.6
FAN15G3536 Fragaria x ananassa HOM05D006157 ORTHO05D007826 7.9e-28 128.3 216 36.1
RcHm_v2.0_Chr6g0307431 Rosa chinensis HOM05D006157 ORTHO05D007826 1.8e-27 127.1 215 35.8
CANSAT54G0006 Cannabis sativa HOM05D006157 ORTHO05D007826 2.3e-27 126.7 223 42.2
Haze_17545 Corylus avellana HOM05D006157 ORTHO05D007826 3.0e-27 126.3 214 40.2
Haze_17554 Corylus avellana HOM05D006157 ORTHO05D007826 3.0e-27 126.3 214 40.2
Gohir.D06G015100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 5.1e-27 125.6 207 39.6
Gohir.A06G017000 Gossypium hirsutum HOM05D006157 ORTHO05D007826 6.7e-27 125.2 207 38.6
Gorai.010G017900 Gossypium raimondii HOM05D006157 ORTHO05D007826 6.7e-27 125.2 207 39.1
TWI56G1258 Tripterygium wilfordii HOM05D006157 ORTHO05D007826 6.7e-27 125.2 217 39.2
Ciclev10002442m.g Citrus clementina HOM05D006157 ORTHO05D007826 1.5e-26 124.0 215 41.4
Actinidia23263 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.9e-26 123.6 221 39.8
MBI02_g17343_MAGBIO Magnolia biondii HOM05D006157 ORTHO05D007826 1.9e-26 123.6 209 39.2
Cfa018525 Carpinus fangiana HOM05D006157 ORTHO05D007826 9.7e-26 121.3 216 39.4
Aqoxy6G01361 Aquilegia oxysepala HOM05D006157 ORTHO05D007826 1.6e-25 120.6 216 45.4
Cpa.g.c24415.4 Carica papaya HOM05D006157 ORTHO05D007826 2.8e-25 119.8 212 39.6
Manes.18G032700 Manihot esculenta HOM05D006157 ORTHO05D007826 4.8e-25 119.0 218 43.1
vmacro21540 Vaccinium macrocarpon HOM05D006157 ORTHO05D007826 4.8e-25 119.0 220 38.2
Potri.002G127800 Populus trichocarpa HOM05D006157 ORTHO05D007826 8.2e-25 118.2 225 38.7
GSVIVG01009525001 Vitis vinifera HOM05D006157 ORTHO05D007826 1.8e-24 117.1 209 42.1
Sabra14G0022700 Salix brachista HOM05D006157 ORTHO05D007826 2.4e-24 116.7 219 39.3
FAN20G0621 Fragaria x ananassa HOM05D006157 ORTHO05D007826 3.1e-24 116.3 219 33.8
Atru.chr13.647 Acer truncatum HOM05D006157 ORTHO05D007826 9.0e-24 114.8 218 37.6
PGSC0003DMG400036180 Solanum tuberosum HOM05D006157 ORTHO05D007826 9.0e-24 114.8 215 34.0
Prupe.1G438800 Prunus persica HOM05D006157 ORTHO05D007826 2.0e-23 113.6 218 35.3
Duzib116G0710 Durio zibethinus HOM05D006157 ORTHO05D007826 3.4e-23 112.8 207 38.6
MD15G1085000 Malus domestica HOM05D006157 ORTHO05D007826 3.4e-23 112.8 221 36.2
Medtr1g019800 Medicago truncatula HOM05D006157 ORTHO05D007826 3.4e-23 112.8 219 37.4
Psat6g012720 Pisum sativum HOM05D006157 ORTHO05D007826 3.4e-23 112.8 221 36.7
PGR083G2028 Punica granatum HOM05D006157 ORTHO05D007826 3.4e-23 112.8 214 42.5
Rhsim06G0048100 Rhododendron simsii HOM05D006157 ORTHO05D007826 5.9e-23 112.1 223 40.4
CiPaw.15G061800 Carya illinoinensis HOM05D006157 ORTHO05D007826 1.0e-22 111.3 225 38.2
Eucgr.F00242 Eucalyptus grandis HOM05D006157 ORTHO05D007826 1.0e-22 111.3 211 40.3
Gorai.005G103500 Gossypium raimondii HOM05D006157 ORTHO05D007826 1.0e-22 111.3 223 34.1
Potri.014G032300 Populus trichocarpa HOM05D006157 ORTHO05D007826 1.0e-22 111.3 219 37.0
Gohir.D02G092100 Gossypium hirsutum HOM05D006157 ORTHO05D007826 1.3e-22 110.9 223 34.1
Sopen04g032780 Solanum pennellii HOM05D006157 ORTHO05D007826 1.3e-22 110.9 217 32.7
FAN27G0611 Fragaria x ananassa HOM05D006157 ORTHO05D007826 1.7e-22 110.5 215 33.5
Thecc.08G011200 Theobroma cacao HOM05D006157 ORTHO05D007826 1.7e-22 110.5 152 45.4
Nitab4.5_0000686g0050 Nicotiana tabacum HOM05D006157 ORTHO05D007826 2.9e-22 109.8 209 34.0
QL02p005407 Quercus lobata HOM05D006157 ORTHO05D007826 2.9e-22 109.8 216 38.0
Gohir.A03G079324 Gossypium hirsutum HOM05D006157 ORTHO05D007826 3.8e-22 109.4 206 35.9
Sed0015883 Sechium edule HOM05D006157 ORTHO05D007826 3.8e-22 109.4 209 36.4
AUR62022432 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.1e-21 107.8 225 34.7
EL10Ac1g01781 Beta vulgaris HOM05D006157 ORTHO05D007826 1.4e-21 107.5 229 33.6
Lj4C53T12 Lonicera japonica HOM05D006157 ORTHO05D007826 1.9e-21 107.1 204 40.7
FvH4_2g34660 Fragaria vesca HOM05D006157 ORTHO05D007826 3.2e-21 106.3 218 32.6
Nitab4.5_0001101g0070 Nicotiana tabacum HOM05D006157 ORTHO05D007826 4.2e-21 105.9 207 34.8
Lsat_1_v5_gn_4_124041 Lactuca sativa HOM05D006157 ORTHO05D007826 5.5e-21 105.5 212 34.0
VMungo1309G0335 Vigna mungo HOM05D006157 ORTHO05D007826 1.6e-20 104.0 223 37.7
TPR.G13684 Trifolium pratense HOM05D006157 ORTHO05D007826 2.1e-20 103.6 222 34.2
MSTRG.25101 Avicennia marina HOM05D006157 ORTHO05D007826 4.6e-20 102.4 206 39.8
MELO3C010885.2 Cucumis melo HOM05D006157 ORTHO05D007826 6.1e-20 102.1 226 33.2
HanXRQChr09g0267931 Helianthus annuus HOM05D006157 ORTHO05D007826 6.1e-20 102.1 220 35.9
Phvul.009G063700 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 6.1e-20 102.1 222 38.7
THA.LOC104806945 Tarenaya hassleriana HOM05D006157 ORTHO05D007826 1.0e-19 101.3 205 35.1
Ca_13302_v3 Cicer arietinum L. HOM05D006157 ORTHO05D007826 1.4e-19 100.9 218 35.3
CsaV3_2G028070 Cucumis sativus L. HOM05D006157 ORTHO05D007826 1.4e-19 100.9 226 33.2
Glyma.06G038400 Glycine max HOM05D006157 ORTHO05D007826 2.3e-19 100.1 224 37.9
Lalb_Chr14g0368791 Lupinus albus HOM05D006157 ORTHO05D007826 3.9e-19 99.4 210 37.6
Nitab4.5_0004184g0060 Nicotiana tabacum HOM05D006157 ORTHO05D007890 5.1e-19 99.0 205 34.1
Sed0006561 Sechium edule HOM05D006157 ORTHO05D007826 6.7e-19 98.6 228 33.8
Peaxi162Scf00064g00125 Petunia axillaris HOM05D006157 ORTHO05D007826 8.8e-19 98.2 205 32.2
AUR62039307 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.5e-18 97.4 230 33.0
Lj5g0002869 Lotus japonicus HOM05D006157 ORTHO05D007826 3.3e-18 96.3 227 32.2
ECA232G2668 Erigeron canadensis HOM05D006157 ORTHO05D007826 4.3e-18 95.9 212 36.8
Manes.05G171900 Manihot esculenta HOM05D006157 ORTHO05D007826 4.3e-18 95.9 214 36.9
Manes.05G171901 Manihot esculenta HOM05D006157 ORTHO05D007826 4.3e-18 95.9 214 36.9
MD08G1103700 Malus domestica HOM05D006157 ORTHO05D007826 5.7e-18 95.5 235 30.6
Glyma.04G037500 Glycine max HOM05D006157 ORTHO05D007826 7.4e-18 95.1 222 38.7
Solyc04g079170.4 Solanum lycopersicum HOM05D006157 ORTHO05D007826 7.4e-18 95.1 211 30.8
Glyma.17G243500 Glycine max HOM05D006157 ORTHO05D007826 3.7e-17 92.8 216 38.9
Cc10_g04340 Coffea canephora HOM05D006157 ORTHO05D007826 6.3e-17 92.0 163 36.8
ClCG08G015710 Citrullus lanatus HOM05D006157 ORTHO05D007826 1.1e-16 91.3 201 33.8
Peaxi162Scf00528g00414 Petunia axillaris HOM05D006157 ORTHO05D007826 2.4e-16 90.1 192 33.9
CARHR037020 Cardamine hirsuta HOM05D006157 ORTHO05D007826 3.1e-16 89.7 189 33.9
VMungo0647G0691 Vigna mungo HOM05D006157 ORTHO05D007826 3.1e-16 89.7 206 39.3
Ah.05g168840 Amaranthus hybridus HOM05D006157 ORTHO05D007826 6.9e-16 88.6 190 33.7
Phvul.001G020800 Phaseolus vulgaris HOM05D006157 ORTHO05D007826 1.2e-15 87.8 206 38.3
Aa31sc924G20 Aethionema arabicum HOM05D006157 ORTHO05D007826 1.5e-15 87.4 210 32.9
Nitab4.5_0000453g0220 Nicotiana tabacum HOM05D006157 ORTHO05D007890 2.0e-15 87.0 209 32.1
SGA_v2.0_scaffold14G07032 Striga asiatica HOM05D006157 ORTHO05D007826 2.0e-15 87.0 211 34.6
Sp1g34500 Schrenkiella parvula HOM05D006157 ORTHO05D007826 7.7e-15 85.1 189 33.3
SpUn0102_0020 Schrenkiella parvula HOM05D006157 ORTHO05D007826 7.7e-15 85.1 189 33.3
AUR62019555 Chenopodium quinoa HOM05D006157 ORTHO05D007826 1.0e-14 84.7 179 35.2
Thhalv10011797m.g Eutrema salsugineum HOM05D006157 ORTHO05D007826 1.3e-14 84.3 191 31.9
Glyma.14G081800 Glycine max HOM05D006157 ORTHO05D007826 3.8e-14 82.8 214 36.0
BcaB07g33839 Brassica carinata HOM05D006157 ORTHO05D007826 1.4e-13 80.9 193 33.2
SalBow8G3379 Salvia bowleyana HOM05D006157 ORTHO05D007826 3.2e-13 79.7 205 31.2
A10p06400 Brassica napus HOM05D006157 ORTHO05D007826 4.2e-13 79.3 167 34.1
DCAR_011305 Daucus carota HOM05D005231 ORTHO05D006387 7.2e-13 78.6 165 33.3
BcaC08g42947 Brassica carinata HOM05D006157 ORTHO05D007826 1.6e-12 77.4 96 43.8
Carub.0001s3622 Capsella rubella HOM05D006157 ORTHO05D007826 2.7e-12 76.6 191 30.9
AL1G53700 Arabidopsis lyrata HOM05D006157 ORTHO05D007826 3.6e-12 76.3 190 31.1
arahy.Tifrunner.gnm1.ann1.HUL940 Arachis hypogaea HOM05D006157 ORTHO05D007826 3.6e-12 76.3 92 58.7
arahy.Tifrunner.gnm1.ann1.R9H0NA Arachis hypogaea HOM05D006157 ORTHO05D007826 3.6e-12 76.3 92 58.7
BolSC99t61279H Brassica oleracea HOM05D006157 ORTHO05D007826 3.6e-12 76.3 195 33.3
Migut.N02699 Erythranthe guttata HOM05D006157 ORTHO05D007826 4.7e-12 75.9 214 28.5
C06p01910 Brassica napus HOM05D006157 ORTHO05D007826 7.9e-12 75.1 195 33.3
AT1G47410 Arabidopsis thaliana HOM05D006157 ORTHO05D007826 1.0e-11 74.7 203 32.0
Solyc12g088890.3 Solanum lycopersicum HOM05D006157 ORTHO05D007890 1.0e-11 74.7 164 34.1
Sopen12g030790 Solanum pennellii HOM05D006157 ORTHO05D007826 2.3e-11 73.6 226 28.8
PGSC0003DMG400015419 Solanum tuberosum HOM05D006157 ORTHO05D007826 5.1e-11 72.4 138 34.1
Migut.C00597 Erythranthe guttata HOM05D006157 ORTHO05D007826 2.6e-10 70.1 199 30.7
Sc02g0007020 Simmondsia chinensis HOM05D006157 ORTHO05D007826 2.6e-10 70.1 228 28.1
Zm00001eb315050 Zea mays HOM05D006157 ORTHO05D007826 3.4e-07 59.7 99 34.3
Actinidia22616 Actinidia chinensis HOM05D006157 ORTHO05D007826 1.7e-06 57.4 134 38.1
ATR0100G006 Amborella trichopoda HOM05D006157 ORTHO05D007826 5.0e-06 55.8 30 66.7
HPP92_027520 Vanilla planifolia HOM05D006157 ORTHO05D007826 5.0e-06 55.8 99 38.4
COL.COLO4_26474 Corchorus olitorius HOM05D006157 ORTHO05D007826 8.5e-06 55.1 204 27.9


User provided reference genes

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