Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3292 Papaver somniferum HOM05D006770 ORTHO05D008356 3.5e-294 1014.2 514 100.0
PSO675G2016 Papaver somniferum HOM05D006770 ORTHO05D008356 5.1e-285 983.8 514 97.5
TAR625G0814 Trochodendron aralioides HOM05D006770 ORTHO05D008356 9.8e-188 660.6 471 70.9
Nn5g30983 Nelumbo nucifera HOM05D006770 ORTHO05D008356 3.2e-186 655.6 479 69.3
QL02p014697 Quercus lobata HOM05D006770 ORTHO05D008356 4.4e-180 635.2 491 65.6
Aqoxy6G01625 Aquilegia oxysepala HOM05D006770 ORTHO05D008356 9.2e-178 627.5 459 68.0
CiPaw.07G136700 Carya illinoinensis HOM05D006770 ORTHO05D008356 6.8e-173 611.3 484 64.3
Haze_22817 Corylus avellana HOM05D006770 ORTHO05D008356 1.2e-172 610.5 476 65.5
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 6.0e-169 598.2 465 66.7
Thecc.08G061300 Theobroma cacao HOM05D006770 ORTHO05D008356 8.6e-168 594.3 486 63.6
Duzib041G0267 Durio zibethinus HOM05D006770 ORTHO05D008356 1.9e-167 593.2 469 64.4
Cfa014101 Carpinus fangiana HOM05D006770 ORTHO05D008356 9.5e-167 590.9 392 74.2
MD00G1136800 Malus domestica HOM05D006770 ORTHO05D008356 2.8e-166 589.3 472 63.8
Prupe.5G010100 Prunus persica HOM05D006770 ORTHO05D008356 3.6e-166 589.0 466 62.9
Atru.chr13.120 Acer truncatum HOM05D006770 ORTHO05D008356 2.0e-164 583.2 485 64.1
Potri.005G252300 Populus trichocarpa HOM05D006770 ORTHO05D008356 4.4e-164 582.0 493 60.6
RcHm_v2.0_Chr5g0066911 Rosa chinensis HOM05D006770 ORTHO05D008356 8.3e-163 577.8 452 64.2
Manes.17G081600 Manihot esculenta HOM05D006770 ORTHO05D008356 2.4e-162 576.2 458 65.3
Ciclev10000935m.g Citrus clementina HOM05D006770 ORTHO05D008356 3.2e-162 575.9 469 63.1
TWI79G0343 Tripterygium wilfordii HOM05D006770 ORTHO05D008356 4.1e-162 575.5 472 61.9
FAN08G2065 Fragaria x ananassa HOM05D006770 ORTHO05D008356 5.4e-162 575.1 454 62.8
FAN13G3072 Fragaria x ananassa HOM05D006770 ORTHO05D008356 7.1e-162 574.7 454 62.6
CDE04G3028 Ceratophyllum demersum HOM05D006770 ORTHO05D008356 1.2e-161 573.9 450 64.4
FAN18G3713 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.1e-161 573.2 450 63.1
Gohir.A11G329900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.7e-161 572.8 492 61.0
FvH4_5g25440 Fragaria vesca HOM05D006770 ORTHO05D008356 3.5e-161 572.4 450 63.1
Rhsim13G0054100 Rhododendron simsii HOM05D006770 ORTHO05D008356 4.6e-161 572.0 468 62.6
COL.COLO4_36416 Corchorus olitorius HOM05D006770 ORTHO05D008356 1.7e-160 570.1 483 61.9
Sc02g0009170 Simmondsia chinensis HOM05D006770 ORTHO05D008356 1.9e-159 566.6 523 58.5
Manes.05G095800 Manihot esculenta HOM05D006770 ORTHO05D008356 2.5e-159 566.2 479 62.2
THA.LOC104813750 Tarenaya hassleriana HOM05D006770 ORTHO05D008356 2.5e-159 566.2 491 59.9
Sabra05G0195800 Salix brachista HOM05D006770 ORTHO05D008356 5.6e-159 565.1 486 59.5
EL10Ac1g01921 Beta vulgaris HOM05D006770 ORTHO05D008356 9.6e-159 564.3 464 62.5
CANSAT64G1545 Cannabis sativa HOM05D006770 ORTHO05D008356 9.6e-159 564.3 461 62.5
Aa31LG2G8050 Aethionema arabicum HOM05D006770 ORTHO05D008356 2.8e-158 562.8 459 63.4
Glyma.07G217000 Glycine max HOM05D006770 ORTHO05D008356 4.0e-157 558.9 453 62.0
Gorai.006G274800 Gossypium raimondii HOM05D006770 ORTHO05D008356 4.0e-157 558.9 480 60.6
AUR62035131 Chenopodium quinoa HOM05D006770 ORTHO05D008356 6.8e-157 558.1 450 63.1
Glyma.20G013900 Glycine max HOM05D006770 ORTHO05D008356 1.2e-156 557.4 473 61.3
Gorai.004G294200 Gossypium raimondii HOM05D006770 ORTHO05D008356 2.6e-156 556.2 480 60.0
AUR62040821 Chenopodium quinoa HOM05D006770 ORTHO05D008356 5.8e-156 555.1 462 61.3
Oeu032124.1 Olea europaea HOM05D006770 ORTHO05D008356 1.3e-155 553.9 448 62.9
Hund01783 Selenicereus undatus HOM05D006770 ORTHO05D008356 1.4e-154 550.4 462 60.8
Medtr4g084940 Medicago truncatula HOM05D006770 ORTHO05D008356 2.4e-154 549.7 456 61.4
Sc02g0009150 Simmondsia chinensis HOM05D006770 ORTHO05D008356 2.4e-154 549.7 513 56.9
Lalb_Chr05g0219451 Lupinus albus HOM05D006770 ORTHO05D008356 7.1e-154 548.1 450 62.0
Phvul.001G002700 Phaseolus vulgaris HOM05D006770 ORTHO05D008356 1.2e-153 547.4 426 62.9
VMungo0251G0866 Vigna mungo HOM05D006770 ORTHO05D008356 1.2e-153 547.4 453 61.1
CsaV3_1G014370 Cucumis sativus L. HOM05D006770 ORTHO05D008356 7.8e-153 544.7 480 59.4
CAN.G79.18 Capsicum annuum HOM05D006770 ORTHO05D008356 1.7e-152 543.5 442 62.4
CAN.G79.22 Capsicum annuum HOM05D006770 ORTHO05D008356 3.9e-152 542.3 467 60.4
Nitab4.5_0001225g0180 Nicotiana tabacum HOM05D006770 ORTHO05D008356 1.5e-151 540.4 457 61.1
Ca_25485_v3 Cicer arietinum L. HOM05D006770 ORTHO05D008356 9.6e-151 537.7 471 59.9
Nitab4.5_0001583g0140 Nicotiana tabacum HOM05D006770 ORTHO05D008356 9.6e-151 537.7 454 61.0
Gohir.D08G007000 Gossypium hirsutum HOM05D006770 ORTHO05D008356 3.6e-150 535.8 454 61.5
Gohir.D08G275542 Gossypium hirsutum HOM05D006770 ORTHO05D008356 3.6e-150 535.8 416 63.7
Gohir.A13G000201 Gossypium hirsutum HOM05D006770 ORTHO05D008356 6.2e-150 535.0 416 63.5
Solyc02g070010.1 Solanum lycopersicum HOM05D006770 ORTHO05D008356 6.2e-150 535.0 452 60.6
Lj4g0024175 Lotus japonicus HOM05D006770 ORTHO05D008356 8.1e-150 534.6 440 60.9
MELO3C004826.2 Cucumis melo HOM05D006770 ORTHO05D008356 1.8e-149 533.5 480 58.8
Sopen02g019170 Solanum pennellii HOM05D006770 ORTHO05D008356 2.4e-149 533.1 481 57.6
PGSC0003DMG400021117 Solanum tuberosum HOM05D006770 ORTHO05D008356 3.1e-149 532.7 448 60.3
TPR.G35412 Trifolium pratense HOM05D006770 ORTHO05D008356 3.1e-149 532.7 476 58.6
Thhalv10004104m.g Eutrema salsugineum HOM05D006770 ORTHO05D008356 5.3e-149 531.9 481 60.5
Dinv31957 Davidia involucrata HOM05D006770 ORTHO05D008356 1.3e-147 527.3 352 72.7
Gohir.A01G231900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.7e-147 526.9 468 59.6
PGR031G0937 Punica granatum HOM05D006770 ORTHO05D008356 6.4e-147 525.0 436 62.6
Gorai.009G456100 Gossypium raimondii HOM05D006770 ORTHO05D008356 1.1e-146 524.2 480 58.1
ECA246G3919 Erigeron canadensis HOM05D006770 ORTHO05D008356 2.4e-146 523.1 439 61.0
CARHR144420 Cardamine hirsuta HOM05D006770 ORTHO05D008356 7.9e-145 518.1 481 58.8
Ah.00g000990 Amaranthus hybridus HOM05D006770 ORTHO05D008356 1.3e-144 517.3 465 59.4
AL5G10970 Arabidopsis lyrata HOM05D006770 ORTHO05D008356 1.3e-144 517.3 468 59.4
BcaC06g31269 Brassica carinata HOM05D006770 ORTHO05D008356 6.6e-144 515.0 469 59.9
BolC7t43787H Brassica oleracea HOM05D006770 ORTHO05D008356 8.7e-144 514.6 464 60.1
BcaC06g34103 Brassica carinata HOM05D006770 ORTHO05D008356 3.3e-143 512.7 464 60.6
C07p32660 Brassica napus HOM05D006770 ORTHO05D008356 5.6e-143 511.9 464 60.6
DCAR_024417 Daucus carota HOM05D006770 ORTHO05D008356 1.6e-142 510.4 474 57.2
Psat7g128200 Pisum sativum HOM05D006770 ORTHO05D008356 1.6e-142 510.4 469 57.1
HanXRQChr06g0167391 Helianthus annuus HOM05D006770 ORTHO05D008356 2.1e-142 510.0 464 57.1
Sp2g13280 Schrenkiella parvula HOM05D006770 ORTHO05D008356 4.8e-142 508.8 480 57.7
SalBow7G3490 Salvia bowleyana HOM05D006770 ORTHO05D008356 6.2e-142 508.4 451 58.3
Cc09_g04530 Coffea canephora HOM05D006770 ORTHO05D008356 1.1e-141 507.7 505 55.4
AT2G01860 Arabidopsis thaliana HOM05D006770 ORTHO05D008356 9.0e-141 504.6 480 57.7
Lsat_1_v5_gn_3_16821 Lactuca sativa HOM05D006770 ORTHO05D008356 2.0e-140 503.4 418 59.6
A06p43970 Brassica napus HOM05D006770 ORTHO05D008356 1.3e-139 500.7 462 59.3
Carub.0005s0082 Capsella rubella HOM05D006770 ORTHO05D008356 2.2e-139 500.0 467 58.7
ATR0807G062 Amborella trichopoda HOM05D006770 ORTHO05D008356 1.1e-138 497.7 505 53.7
Atru.chr13.118 Acer truncatum HOM05D006770 ORTHO05D008356 4.2e-138 495.7 485 57.3
Migut.M00215 Erythranthe guttata HOM05D006770 ORTHO05D008356 5.4e-138 495.4 454 58.8
BraA06t27272Z Brassica rapa HOM05D006770 ORTHO05D008356 7.9e-137 491.5 462 58.4
Peaxi162Scf00670g00024 Petunia axillaris HOM05D006770 ORTHO05D008356 1.8e-133 480.3 441 58.3
Actinidia23351 Actinidia chinensis HOM05D006770 ORTHO05D008356 4.0e-133 479.2 427 59.0
HPP92_007114 Vanilla planifolia HOM05D006770 ORTHO05D008356 9.0e-133 478.0 452 56.4
Gorai.007G379700 Gossypium raimondii HOM05D006770 ORTHO05D008356 2.0e-132 476.9 420 60.0
vmacro02830 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 1.0e-131 474.6 347 67.4
Zm00001eb391890 Zea mays HOM05D006770 ORTHO05D008356 2.0e-116 423.7 406 55.4
MD16G1284100 Malus domestica HOM05D006770 ORTHO05D008356 4.5e-116 422.5 417 55.6
SEGI_37300 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 1.3e-115 421.0 416 52.6
Lj9P204T39 Lonicera japonica HOM05D006770 ORTHO05D008356 6.1e-113 412.1 357 61.1
Os02g0118000 Oryza sativa ssp. japonica HOM05D006770 ORTHO05D008356 1.0e-112 411.4 402 54.2
SGA_v2.0_scaffold476G52129 Striga asiatica HOM05D006770 ORTHO05D008356 4.3e-111 406.0 479 49.1
SGA_v2.0_scaffold538G52786 Striga asiatica HOM05D006770 ORTHO05D008356 8.2e-110 401.7 480 49.0
Sed0018053 Sechium edule HOM05D006770 ORTHO05D008356 7.5e-95 352.1 323 59.1
SEGI_07142 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 2.3e-80 303.9 398 43.5
Gohir.D11G349500 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.9e-78 296.2 220 63.6
Actinidia12910 Actinidia chinensis HOM05D006770 ORTHO05D008356 2.8e-73 280.4 334 49.4
Gohir.A06G000350 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.3e-66 256.5 192 63.5
ClCG01G012950 Citrullus lanatus HOM05D006770 ORTHO05D008356 5.8e-55 219.5 228 53.5
CAN.G733.12 Capsicum annuum HOM05D006770 ORTHO05D008356 1.0e-43 182.2 212 48.1
AagrBONN_evm.TU.Sc2ySwM_117.3058 Anthoceros agrestis HOM05D006770 ORTHO05D008356 2.1e-41 174.5 314 33.4
VMungo0720G0800 Vigna mungo HOM05D006770 ORTHO05D008356 5.4e-29 133.3 139 51.1
Gohir.D02G000400 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.3e-27 128.6 176 49.4
CAN.G332.6 Capsicum annuum HOM05D006770 ORTHO05D008356 5.6e-26 123.2 106 55.7
VMungo0331G1801 Vigna mungo HOM05D002295 ORTHO05D008356 2.2e-22 111.3 89 58.4
Mapoly0166s0014 Marchantia polymorpha HOM05D006770 ORTHO05D008356 8.4e-22 109.4 232 31.5
Pp3c13_18720 Physcomitrium patens HOM05D006770 ORTHO05D008356 3.7e-17 94.0 211 29.4
Pp3c13_18722 Physcomitrium patens HOM05D006770 ORTHO05D008356 3.7e-17 94.0 211 29.4
CBR_g51330 Chara braunii HOM05D009772 ORTHO05D000353 2.2e-14 84.7 310 22.6
vmacro02831 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 8.4e-14 82.8 113 46.0
TAR381G0468 Trochodendron aralioides HOM05D006770 ORTHO05D008356 2.5e-13 81.3 97 51.5
Lsat_1_v5_gn_1_52140 Lactuca sativa HOM05D004824 ORTHO05D003903 2.4e-08 64.7 187 26.7
Atru.chr1.1414 Acer truncatum HOM05D002649 ORTHO05D002838 3.1e-08 64.3 385 23.1
HPP92_006127 Vanilla planifolia HOM05D002479 ORTHO05D002675 1.2e-07 62.4 144 24.3
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 1.5e-07 62.0 124 27.4
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 7.6e-07 59.7 121 25.6
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 7.6e-07 59.7 124 25.8
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 1.3e-06 58.9 124 25.8
Glyma.06G268800 Glycine max HOM05D003177 ORTHO05D003481 1.3e-06 58.9 184 23.4
CiPaw.09G048400 Carya illinoinensis HOM05D002649 ORTHO05D002838 2.2e-06 58.2 350 21.7
Zm00001eb406750 Zea mays HOM05D025020 ORTHO05D009167 2.2e-06 58.2 208 26.0
Lj2C400G16 Lonicera japonica HOM05D002649 ORTHO05D002838 3.8e-06 57.4 381 20.5
MD15G1148600 Malus domestica HOM05D006258 ORTHO05D007961 5.0e-06 57.0 139 25.9


User provided reference genes

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