Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G3157 Papaver somniferum HOM05D023305 ORTHO05D000676 2.1e-213 745.3 353 100.0
PSO541G5692 Papaver somniferum HOM05D023305 ORTHO05D000676 4.8e-93 345.5 371 53.9
PSO170G4154 Papaver somniferum HOM05D000007 ORTHO05D000676 2.7e-19 100.5 345 28.7
PSO081G0024 Papaver somniferum HOM05D023305 ORTHO05D000676 4.3e-17 93.2 282 28.4
Nn2g13281 Nelumbo nucifera HOM05D000007 ORTHO05D000017 9.5e-17 92.0 253 29.2
PSO761G0215 Papaver somniferum HOM05D000007 ORTHO05D000676 9.5e-17 92.0 297 28.6
PSO675G0641 Papaver somniferum HOM05D000007 ORTHO05D000676 3.1e-15 87.0 253 26.9
COL.COLO4_11917 Corchorus olitorius HOM05D000007 ORTHO05D020500 5.8e-14 82.8 273 25.3
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 7.6e-14 82.4 240 25.8
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.3e-13 81.6 254 28.3
PSO782G2302 Papaver somniferum HOM05D023305 ORTHO05D000676 1.7e-13 81.3 251 30.7
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.7e-13 81.3 242 25.6
PSO063G2623 Papaver somniferum HOM05D000007 ORTHO05D000676 2.2e-13 80.9 194 30.4
vmacro01618 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 2.2e-13 80.9 256 27.3
vmacro23030 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 2.2e-13 80.9 256 27.3
vmacro23187 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 8.4e-13 79.0 256 27.0
TAR371G1268 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.4e-12 78.2 285 25.6
PSO478G4558 Papaver somniferum HOM05D000007 ORTHO05D000017 2.4e-12 77.4 277 27.4
COL.COLO4_19027 Corchorus olitorius HOM05D000007 ORTHO05D000017 4.1e-12 76.6 267 25.8
PSO017G2717 Papaver somniferum HOM05D000007 ORTHO05D000676 4.1e-12 76.6 313 27.2
PSO675G0646 Papaver somniferum HOM05D000007 ORTHO05D000676 9.2e-12 75.5 303 27.4
Atru.chr3.3109 Acer truncatum HOM05D000007 ORTHO05D000521 2.1e-11 74.3 252 29.4
Gorai.013G166900 Gossypium raimondii HOM05D000007 ORTHO05D000039 2.1e-11 74.3 283 24.0
Gohir.A06G008600 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.7e-11 73.9 174 28.7
Gohir.D06G004200 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.7e-11 73.9 174 28.7
TAR371G0593 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.7e-11 73.9 232 28.4
TAR623G1201 Trochodendron aralioides HOM05D000007 ORTHO05D012655 2.7e-11 73.9 252 25.8
COL.COLO4_15974 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.5e-11 73.6 212 26.4
Gorai.010G008800 Gossypium raimondii HOM05D000007 ORTHO05D000017 3.5e-11 73.6 174 28.7
Gohir.D13G149200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 6.0e-11 72.8 283 23.7
PSO648G0101 Papaver somniferum HOM05D000007 ORTHO05D000017 6.0e-11 72.8 207 31.9
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.0e-11 72.8 253 25.3
Actinidia29351 Actinidia chinensis HOM05D000007 ORTHO05D000039 7.8e-11 72.4 252 27.4
MBI19_g35549_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.0e-10 72.0 248 27.8
PSO421G0425 Papaver somniferum HOM05D000007 ORTHO05D000017 1.0e-10 72.0 249 22.9
MBI14_g30652_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000676 3.9e-10 70.1 189 25.4
PSO761G0457 Papaver somniferum HOM05D000007 ORTHO05D000676 3.9e-10 70.1 258 23.3
Aqoxy4G02064 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 5.1e-10 69.7 245 29.0
PSO135G0896 Papaver somniferum HOM05D000007 ORTHO05D000017 5.1e-10 69.7 253 25.7
AL5G38790 Arabidopsis lyrata HOM05D001738 ORTHO05D001644 6.6e-10 69.3 249 24.5
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 6.6e-10 69.3 216 28.7
Thecc.08G030700 Theobroma cacao HOM05D000007 ORTHO05D000017 8.7e-10 68.9 222 27.9
Peaxi162Scf00047g00844 Petunia axillaris HOM05D000007 ORTHO05D000017 1.1e-09 68.6 316 23.4
vmacro03637 Vaccinium macrocarpon HOM05D000007 ORTHO05D000017 1.1e-09 68.6 210 22.4
COL.COLO4_12912 Corchorus olitorius HOM05D000007 ORTHO05D020500 2.5e-09 67.4 182 26.9
Cfa006260 Carpinus fangiana HOM05D000007 ORTHO05D000521 3.3e-09 67.0 200 29.0
Prupe.3G191200 Prunus persica HOM05D000007 ORTHO05D000017 3.3e-09 67.0 272 25.7
COL.COLO4_25857 Corchorus olitorius HOM05D000007 ORTHO05D000521 4.3e-09 66.6 286 23.1
Gohir.A13G144400 Gossypium hirsutum HOM05D000007 ORTHO05D000039 5.6e-09 66.2 209 24.4
PSO513G0065 Papaver somniferum HOM05D000007 ORTHO05D000017 5.6e-09 66.2 277 24.9
PSO648G0118 Papaver somniferum HOM05D000007 ORTHO05D000017 5.6e-09 66.2 207 30.0
RcHm_v2.0_Chr6g0259371 Rosa chinensis HOM05D000007 ORTHO05D000039 5.6e-09 66.2 210 28.6
Gohir.A06G169002 Gossypium hirsutum HOM05D000007 ORTHO05D000039 7.3e-09 65.9 309 24.6
MD03G1028100 Malus domestica HOM05D000007 ORTHO05D000039 7.3e-09 65.9 194 28.9
Aqoxy1G03697 Aquilegia oxysepala HOM05D000007 ORTHO05D007631 9.6e-09 65.5 210 28.6
Cfa015552 Carpinus fangiana HOM05D000007 ORTHO05D000017 9.6e-09 65.5 193 28.5
PSO151G0220 Papaver somniferum HOM05D000007 ORTHO05D000676 9.6e-09 65.5 246 24.8
PSO478G4250 Papaver somniferum HOM05D000007 ORTHO05D000676 9.6e-09 65.5 249 25.3
Rhsim11G0117300 Rhododendron simsii HOM05D000007 ORTHO05D000521 9.6e-09 65.5 227 26.0
Actinidia37850 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.6e-08 64.7 259 25.9
Gohir.D11G157600 Gossypium hirsutum HOM05D000007 ORTHO05D000521 1.6e-08 64.7 213 24.9
Gorai.010G207900 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.6e-08 64.7 309 25.2
Lj4A129G111 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-08 64.7 212 25.9
COL.COLO4_20026 Corchorus olitorius HOM05D000007 ORTHO05D000521 2.1e-08 64.3 207 27.5
Gohir.D06G176600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 2.1e-08 64.3 305 25.2
RcHm_v2.0_Chr2g0167131 Rosa chinensis HOM05D000007 ORTHO05D000017 2.1e-08 64.3 209 26.3
CDE05G3368 Ceratophyllum demersum HOM05D000007 ORTHO05D000017 2.8e-08 63.9 119 34.5
AUR62011562 Chenopodium quinoa HOM05D000007 ORTHO05D000039 2.8e-08 63.9 249 25.3
Duzib041G0312 Durio zibethinus HOM05D000007 ORTHO05D000017 2.8e-08 63.9 228 24.1
Gohir.D06G160200 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.8e-08 63.9 205 25.9
PSO832G0027 Papaver somniferum HOM05D000007 ORTHO05D000676 2.8e-08 63.9 173 26.0
A09p40630 Brassica napus HOM05D001738 ORTHO05D001644 3.6e-08 63.5 272 23.9
Haze_00995 Corylus avellana HOM05D000007 ORTHO05D000017 3.6e-08 63.5 197 27.9
Gorai.010G186900 Gossypium raimondii HOM05D000007 ORTHO05D000017 3.6e-08 63.5 205 25.9
MD02G1290800 Malus domestica HOM05D000007 ORTHO05D000017 3.6e-08 63.5 209 24.9
PSO104G0244 Papaver somniferum HOM05D000007 ORTHO05D000017 3.6e-08 63.5 296 24.3
PSO675G8287 Papaver somniferum HOM05D000007 ORTHO05D000017 3.6e-08 63.5 267 23.2
Thecc.05G284200 Theobroma cacao HOM05D000007 ORTHO05D001644 3.6e-08 63.5 188 27.1
AUR62016381 Chenopodium quinoa HOM05D000007 ORTHO05D000039 4.7e-08 63.2 275 24.0
Haze_04558 Corylus avellana HOM05D000007 ORTHO05D000521 4.7e-08 63.2 204 29.4
Haze_14521 Corylus avellana HOM05D000007 ORTHO05D000039 4.7e-08 63.2 214 25.7
Gohir.A11G151150 Gossypium hirsutum HOM05D000007 ORTHO05D000521 4.7e-08 63.2 274 25.5
PSO170G1632 Papaver somniferum HOM05D000007 ORTHO05D000017 4.7e-08 63.2 269 26.0
Prupe.3G110600 Prunus persica HOM05D000007 ORTHO05D000039 4.7e-08 63.2 291 26.5
PGSC0003DMG400001294 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.7e-08 63.2 209 25.8
Thecc.06G234200 Theobroma cacao HOM05D000007 ORTHO05D000017 4.7e-08 63.2 201 25.9
Gohir.D11G157900 Gossypium hirsutum HOM05D000007 ORTHO05D000521 8.1e-08 62.4 274 25.5
PSO832G1527 Papaver somniferum HOM05D000007 ORTHO05D000676 8.1e-08 62.4 239 25.1
Prupe.5G081800 Prunus persica HOM05D000007 ORTHO05D000039 8.1e-08 62.4 193 29.5
Gohir.A06G153400 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.1e-07 62.0 205 25.9
Lalb_Chr19g0132591 Lupinus albus HOM05D000007 ORTHO05D000039 1.1e-07 62.0 192 26.0
PSO421G0568 Papaver somniferum HOM05D000007 ORTHO05D000676 1.1e-07 62.0 159 29.6
PSO732G0780 Papaver somniferum HOM05D000007 ORTHO05D000676 1.1e-07 62.0 209 23.9
Dinv06539 Davidia involucrata HOM05D000007 ORTHO05D000039 1.4e-07 61.6 185 24.3
Nitab4.5_0011068g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 1.4e-07 61.6 292 23.6
PSO421G0646 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-07 61.6 263 25.5
PSO832G0155 Papaver somniferum HOM05D000007 ORTHO05D000676 1.4e-07 61.6 307 23.1
Prupe.2G120700 Prunus persica HOM05D000007 ORTHO05D000039 1.4e-07 61.6 215 27.4
Aqoxy3G03704 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 1.8e-07 61.2 176 29.0
Cc00_g01300 Coffea canephora HOM05D000007 ORTHO05D000017 1.8e-07 61.2 203 24.6
MD17G1227400 Malus domestica HOM05D000007 ORTHO05D000039 1.8e-07 61.2 294 25.9
BraA09t39559Z Brassica rapa HOM05D001738 ORTHO05D001644 2.4e-07 60.8 284 24.3
Cc03_g09980 Coffea canephora HOM05D000007 ORTHO05D000017 2.4e-07 60.8 186 26.3
BolC3t20600H Brassica oleracea HOM05D001738 ORTHO05D001644 3.1e-07 60.5 142 28.2
Cfa007563 Carpinus fangiana HOM05D000513 ORTHO05D005338 3.1e-07 60.5 256 25.4
Nitab4.5_0004124g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000521 3.1e-07 60.5 270 20.7
PSO017G4597 Papaver somniferum HOM05D000007 ORTHO05D000676 3.1e-07 60.5 193 27.5
PSO478G2718 Papaver somniferum HOM05D000007 ORTHO05D000676 3.1e-07 60.5 198 25.8
PSO782G5241 Papaver somniferum HOM05D000007 ORTHO05D000017 3.1e-07 60.5 187 31.0
RcHm_v2.0_Chr3g0456291 Rosa chinensis HOM05D000007 ORTHO05D000039 3.1e-07 60.5 225 24.0
TAR623G0051 Trochodendron aralioides HOM05D008437 ORTHO05D008819 3.1e-07 60.5 218 24.8
Duzib160G0463 Durio zibethinus HOM05D000007 ORTHO05D000017 4.0e-07 60.1 201 24.4
Duzib268G1516 Durio zibethinus HOM05D000007 ORTHO05D000039 4.0e-07 60.1 211 24.6
Migut.F01807 Erythranthe guttata HOM05D000007 ORTHO05D000017 4.0e-07 60.1 187 23.5
PSO421G0462 Papaver somniferum HOM05D000007 ORTHO05D000676 4.0e-07 60.1 263 25.5
Aqoxy6G01544 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 5.2e-07 59.7 262 23.3
COL.COLO4_16487 Corchorus olitorius HOM05D000007 ORTHO05D000521 5.2e-07 59.7 198 25.3
PSO210G2056 Papaver somniferum HOM05D000007 ORTHO05D000676 5.2e-07 59.7 154 27.9
PSO541G4904 Papaver somniferum HOM05D000007 ORTHO05D000676 5.2e-07 59.7 154 27.9
PSO675G3399 Papaver somniferum HOM05D000007 ORTHO05D000676 5.2e-07 59.7 271 23.2
THA.LOC104799786 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 5.2e-07 59.7 184 26.1
Actinidia30171 Actinidia chinensis HOM05D000007 ORTHO05D009073 6.9e-07 59.3 179 25.1
Aqoxy3G01080 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 6.9e-07 59.3 203 26.1
COL.COLO4_13967 Corchorus olitorius HOM05D000007 ORTHO05D000521 6.9e-07 59.3 84 41.7
DCAR_023489 Daucus carota HOM05D000007 ORTHO05D000017 6.9e-07 59.3 145 30.3
Lj3P398T11 Lonicera japonica HOM05D000007 ORTHO05D000017 6.9e-07 59.3 211 23.7
Lj1g0023224 Lotus japonicus HOM05D000007 ORTHO05D000039 6.9e-07 59.3 274 21.9
MD10G1332600 Malus domestica HOM05D000007 ORTHO05D000017 6.9e-07 59.3 197 25.9
RcHm_v2.0_Chr4g0419631 Rosa chinensis HOM05D000007 ORTHO05D000521 6.9e-07 59.3 188 25.5
COL.COLO4_20207 Corchorus olitorius HOM05D000007 ORTHO05D000017 9.0e-07 58.9 277 24.2
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 9.0e-07 58.9 212 25.9
Migut.G00030 Erythranthe guttata HOM05D007162 ORTHO05D007631 9.0e-07 58.9 197 26.4
Thhalv10003053m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 9.0e-07 58.9 160 26.9
Os09g0448100 Oryza sativa ssp. japonica HOM05D000007 ORTHO05D007252 9.0e-07 58.9 205 25.9
PSO063G1309 Papaver somniferum HOM05D000007 ORTHO05D000017 9.0e-07 58.9 253 24.5
SalBow4G0883 Salvia bowleyana HOM05D000412 ORTHO05D000429 9.0e-07 58.9 234 23.9
Aqoxy7G00350 Aquilegia oxysepala HOM05D007726 ORTHO05D008819 1.2e-06 58.5 156 26.9
MD03G1027900 Malus domestica HOM05D000007 ORTHO05D000039 1.2e-06 58.5 194 26.8
PSO832G1503 Papaver somniferum HOM05D000007 ORTHO05D000017 1.2e-06 58.5 212 23.1
THA.LOC104818784 Tarenaya hassleriana HOM05D000007 ORTHO05D000017 1.2e-06 58.5 208 26.9
Aqoxy4G00228 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 1.5e-06 58.2 214 23.8
FAN02G3393 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.5e-06 58.2 281 27.0
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.5e-06 58.2 210 26.2
Oeu041630.1 Olea europaea HOM05D000007 ORTHO05D000039 1.5e-06 58.2 265 23.4
PSO421G0356 Papaver somniferum HOM05D000007 ORTHO05D000676 1.5e-06 58.2 171 28.1
BcaB03g11687 Brassica carinata HOM05D001738 ORTHO05D001644 2.0e-06 57.8 140 27.1
CANSAT54G1614 Cannabis sativa HOM05D000007 ORTHO05D000039 2.0e-06 57.8 197 25.9
Carub.0005s0581 Capsella rubella HOM05D000171 ORTHO05D000101 2.0e-06 57.8 242 26.4
CAN.G294.25 Capsicum annuum HOM05D000007 ORTHO05D000521 2.0e-06 57.8 214 25.7
COL.COLO4_21674 Corchorus olitorius HOM05D000007 ORTHO05D000039 2.0e-06 57.8 228 24.6
QL04p053284 Quercus lobata HOM05D000007 ORTHO05D000039 2.0e-06 57.8 193 25.9
Sed0024435 Sechium edule HOM05D000007 ORTHO05D000017 2.0e-06 57.8 193 25.4
CANSAT54G2366 Cannabis sativa HOM05D000007 ORTHO05D000039 2.6e-06 57.4 266 25.9
Dinv38360 Davidia involucrata HOM05D000007 ORTHO05D000017 2.6e-06 57.4 98 34.7
PSO421G0154 Papaver somniferum HOM05D000007 ORTHO05D000676 2.6e-06 57.4 163 27.6
QL07p003314 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-06 57.4 256 23.8
unitig_26.g8888 Utricularia gibba HOM05D000007 ORTHO05D000017 2.6e-06 57.4 222 24.8
Thhalv10012265m.g Eutrema salsugineum HOM05D001738 ORTHO05D001644 3.4e-06 57.0 144 29.2
MD03G1028400 Malus domestica HOM05D000007 ORTHO05D000039 3.4e-06 57.0 197 30.5
Nn4g25520 Nelumbo nucifera HOM05D007162 ORTHO05D007631 3.4e-06 57.0 189 23.3
TAR624G0469 Trochodendron aralioides HOM05D000007 ORTHO05D000521 3.4e-06 57.0 246 26.0
arahy.Tifrunner.gnm1.ann1.N9LGBL Arachis hypogaea HOM05D000007 ORTHO05D000017 4.4e-06 56.6 175 23.4
FvH4_3g39330 Fragaria vesca HOM05D000007 ORTHO05D000039 4.4e-06 56.6 206 28.6
Medtr1g023400 Medicago truncatula HOM05D014208 ORTHO05D000039 4.4e-06 56.6 196 24.0
PSO170G0624 Papaver somniferum HOM05D007162 ORTHO05D007631 4.4e-06 56.6 192 24.5
PSO384G1088 Papaver somniferum HOM05D000007 ORTHO05D000017 4.4e-06 56.6 209 23.0
PSO478G2016 Papaver somniferum HOM05D000007 ORTHO05D000017 4.4e-06 56.6 218 23.4
TAR185G0005 Trochodendron aralioides HOM05D008437 ORTHO05D008819 4.4e-06 56.6 204 24.5
Aqoxy5G00679 Aquilegia oxysepala HOM05D000171 ORTHO05D000101 5.8e-06 56.2 182 28.6
CANSAT54G0152 Cannabis sativa HOM05D014652 ORTHO05D000039 5.8e-06 56.2 119 29.4
Haze_04106 Corylus avellana HOM05D000007 ORTHO05D000039 5.8e-06 56.2 159 30.2
Dinv26455 Davidia involucrata HOM05D000007 ORTHO05D013933 5.8e-06 56.2 255 22.7
FAN11G3224 Fragaria x ananassa HOM05D000007 ORTHO05D000039 5.8e-06 56.2 206 28.2
HanXRQChr11g0341331 Helianthus annuus HOM05D000007 ORTHO05D000017 5.8e-06 56.2 77 37.7
HanXRQChr13g0422021 Helianthus annuus HOM05D000007 ORTHO05D000017 5.8e-06 56.2 77 37.7
COL.COLO4_11928 Corchorus olitorius HOM05D000007 ORTHO05D000039 7.6e-06 55.8 178 25.3
HanXRQChr07g0186031 Helianthus annuus HOM05D000007 ORTHO05D000017 7.6e-06 55.8 77 37.7
PSO339G5703 Papaver somniferum HOM05D000007 ORTHO05D000017 7.6e-06 55.8 285 24.9
SalBow1G0360 Salvia bowleyana HOM05D000007 ORTHO05D000521 7.6e-06 55.8 189 25.9
AT3G06240 Arabidopsis thaliana HOM05D000007 ORTHO05D000017 9.9e-06 55.5 188 27.1
FvH4_6g27880 Fragaria vesca HOM05D000007 ORTHO05D000039 9.9e-06 55.5 283 24.4
FAN11G0276 Fragaria x ananassa HOM05D000007 ORTHO05D000017 9.9e-06 55.5 263 24.7
FAN14G0238 Fragaria x ananassa HOM05D000007 ORTHO05D000039 9.9e-06 55.5 283 24.4
Lj4g0007807 Lotus japonicus HOM05D000007 ORTHO05D000039 9.9e-06 55.5 175 25.7
MD00G1070100 Malus domestica HOM05D000007 ORTHO05D000017 9.9e-06 55.5 91 36.3
Nitab4.5_0003693g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.9e-06 55.5 268 24.3
Nitab4.5_0003693g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000039 9.9e-06 55.5 212 26.4


User provided reference genes

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