Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2946 Papaver somniferum HOM05D005409 ORTHO05D006456 0.0e+00 1174.8 615 100.0
PSO675G2591 Papaver somniferum HOM05D005409 ORTHO05D006456 0.0e+00 1155.2 615 98.4
TAR624G1144 Trochodendron aralioides HOM05D005409 ORTHO05D006456 1.2e-163 580.9 656 54.6
TAR626G0140 Trochodendron aralioides HOM05D005409 ORTHO05D006456 5.3e-156 555.4 653 55.3
Nn1g06923 Nelumbo nucifera HOM05D005409 ORTHO05D006456 2.6e-155 553.1 657 53.7
Aqoxy1G03830 Aquilegia oxysepala HOM05D005409 ORTHO05D006456 1.6e-128 464.2 689 46.7
Dinv18952 Davidia involucrata HOM05D005409 ORTHO05D006456 5.2e-127 459.1 683 48.3
Prupe.4G030000 Prunus persica HOM05D005409 ORTHO05D006456 1.5e-126 457.6 654 46.9
MD10G1310800 Malus domestica HOM05D005409 ORTHO05D006456 2.8e-125 453.4 647 46.8
Duzib192G0995 Durio zibethinus HOM05D005409 ORTHO05D006456 4.8e-125 452.6 656 47.3
Hma1.2p1_0809F.1_g221770 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 3.1e-124 449.9 658 49.1
Cfa016400 Carpinus fangiana HOM05D005409 ORTHO05D006456 7.7e-123 445.3 657 46.4
Thecc.06G207400 Theobroma cacao HOM05D005409 ORTHO05D006456 9.5e-121 438.3 664 46.1
MD05G1335400 Malus domestica HOM05D005409 ORTHO05D006456 1.8e-119 434.1 650 47.2
Ciclev10014614m.g Citrus clementina HOM05D005409 ORTHO05D006456 3.0e-119 433.3 653 45.5
Gohir.D10G017400 Gossypium hirsutum HOM05D005409 ORTHO05D006456 1.2e-118 431.4 651 46.7
Gorai.011G019300 Gossypium raimondii HOM05D005409 ORTHO05D006456 1.2e-118 431.4 651 46.7
FAN25G1204 Fragaria x ananassa HOM05D005409 ORTHO05D006456 7.5e-118 428.7 687 43.8
Manes.17G030300 Manihot esculenta HOM05D005409 ORTHO05D006456 7.5e-118 428.7 654 46.5
Lj2A276T57 Lonicera japonica HOM05D005409 ORTHO05D006456 3.7e-117 426.4 658 47.0
MBI02_g26225_MAGBIO Magnolia biondii HOM05D005409 ORTHO05D006456 6.3e-117 425.6 639 49.0
Duzib235G0390 Durio zibethinus HOM05D005409 ORTHO05D006456 2.7e-115 420.2 665 45.4
Gohir.D09G070300 Gossypium hirsutum HOM05D005409 ORTHO05D006456 4.5e-115 419.5 657 45.5
CiPaw.10G113200 Carya illinoinensis HOM05D005409 ORTHO05D006456 2.9e-114 416.8 654 45.0
Gohir.A10G017200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 2.9e-114 416.8 651 46.2
QL05p077347 Quercus lobata HOM05D005409 ORTHO05D006456 5.0e-114 416.0 712 44.2
Sc17g0006920 Simmondsia chinensis HOM05D005409 ORTHO05D006456 5.0e-114 416.0 650 44.9
COL.COLO4_33645 Corchorus olitorius HOM05D005409 ORTHO05D006456 6.6e-114 415.6 647 47.4
Ca_18454_v3 Cicer arietinum L. HOM05D005409 ORTHO05D006456 1.1e-113 414.8 664 44.7
Glyma.07G187300 Glycine max HOM05D005409 ORTHO05D006456 1.5e-113 414.5 657 43.8
Glyma.08G061800 Glycine max HOM05D005409 ORTHO05D006456 1.9e-113 414.1 660 43.5
Hund23539 Selenicereus undatus HOM05D005409 ORTHO05D006456 4.3e-113 412.9 661 45.7
Nitab4.5_0006456g0010 Nicotiana tabacum HOM05D005409 ORTHO05D006456 5.6e-113 412.5 674 46.9
Gorai.006G084700 Gossypium raimondii HOM05D005409 ORTHO05D006456 9.5e-113 411.8 664 45.0
Cc02_g11840 Coffea canephora HOM05D005409 ORTHO05D006456 2.8e-112 410.2 683 45.4
Nitab4.5_0000503g0080 Nicotiana tabacum HOM05D005409 ORTHO05D006456 8.0e-112 408.7 675 45.8
AUR62012574 Chenopodium quinoa HOM05D005409 ORTHO05D006456 3.0e-111 406.8 669 47.4
VMungo0251G1750 Vigna mungo HOM05D005409 ORTHO05D006456 2.6e-110 403.7 665 42.9
CiPaw.10G113100 Carya illinoinensis HOM05D005409 ORTHO05D006456 3.4e-110 403.3 652 47.1
Lj4g0002185 Lotus japonicus HOM05D005409 ORTHO05D006456 4.4e-110 402.9 664 43.7
Solyc02g079880.3 Solanum lycopersicum HOM05D005409 ORTHO05D006456 5.8e-110 402.5 673 44.4
CsaV3_1G011380 Cucumis sativus L. HOM05D005409 ORTHO05D006456 1.7e-109 401.0 647 44.4
Peaxi162Scf00759g00211 Petunia axillaris HOM05D005409 ORTHO05D006456 2.9e-109 400.2 676 45.3
Phvul.002G218900 Phaseolus vulgaris HOM05D005409 ORTHO05D006456 4.9e-109 399.4 655 42.9
PGSC0003DMG400021722 Solanum tuberosum HOM05D005409 ORTHO05D006456 4.9e-109 399.4 674 45.3
Actinidia11830 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.1e-108 398.3 674 43.0
AUR62014626 Chenopodium quinoa HOM05D005409 ORTHO05D006456 4.1e-108 396.4 669 46.9
Gohir.A09G070200 Gossypium hirsutum HOM05D005409 ORTHO05D006456 4.1e-108 396.4 654 44.5
Sopen02g024640 Solanum pennellii HOM05D005409 ORTHO05D006456 3.0e-106 390.2 676 43.9
ClCG03G005190 Citrullus lanatus HOM05D005409 ORTHO05D006456 3.9e-106 389.8 645 43.9
EL10As6g23684 Beta vulgaris HOM05D005409 ORTHO05D006456 8.6e-106 388.7 672 46.0
Lalb_Chr09g0327161 Lupinus albus HOM05D005409 ORTHO05D006456 1.1e-105 388.3 651 43.6
MELO3C002515.2 Cucumis melo HOM05D005409 ORTHO05D006456 1.9e-105 387.5 652 44.9
CANSAT35G0463 Cannabis sativa HOM05D005409 ORTHO05D006456 3.3e-105 386.7 647 45.4
Lj1A1221T57 Lonicera japonica HOM05D005409 ORTHO05D006456 1.6e-104 384.4 630 44.6
Oeu016146.1 Olea europaea HOM05D005409 ORTHO05D006456 1.6e-104 384.4 670 43.4
Psat0s935g0040 Pisum sativum HOM05D005409 ORTHO05D006456 2.8e-104 383.6 645 45.0
Hma1.2p1_0809F.1_g221760 Hydrangea macrophylla HOM05D005409 ORTHO05D006456 4.7e-104 382.9 524 48.1
GSVIVG01006401001 Vitis vinifera HOM05D005409 ORTHO05D006456 4.7e-104 382.9 651 43.0
Medtr4g092050 Medicago truncatula HOM05D005409 ORTHO05D006456 2.0e-102 377.5 653 43.6
Sed0006411 Sechium edule HOM05D005409 ORTHO05D006456 3.7e-101 373.2 641 42.6
TPR.G13934 Trifolium pratense HOM05D005409 ORTHO05D006456 1.1e-100 371.7 661 44.3
ECA236G3644 Erigeron canadensis HOM05D005409 ORTHO05D006456 2.1e-99 367.5 611 43.5
Potri.011G031900 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.0e-98 365.2 655 45.3
HanXRQChr15g0482771 Helianthus annuus HOM05D005409 ORTHO05D006456 8.1e-96 355.5 643 43.4
Ah.14g088510 Amaranthus hybridus HOM05D005409 ORTHO05D006456 2.3e-95 354.0 662 42.6
HanXRQChr15g0482781 Helianthus annuus HOM05D005409 ORTHO05D006456 3.1e-95 353.6 640 43.4
GSVIVG01030650001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.0e-94 350.9 618 42.1
TWI63G1109 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.6e-94 350.5 663 41.8
Lalb_Chr16g0383301 Lupinus albus HOM05D005409 ORTHO05D006456 2.9e-93 347.1 656 40.5
Rhsim02G0115600 Rhododendron simsii HOM05D005409 ORTHO05D006456 1.9e-92 344.4 716 40.5
MSTRG.15953 Avicennia marina HOM05D005409 ORTHO05D006456 5.4e-92 342.8 675 40.3
Eucgr.E03596 Eucalyptus grandis HOM05D005409 ORTHO05D006456 1.2e-91 341.7 527 45.9
vmacro15844 Vaccinium macrocarpon HOM05D005409 ORTHO05D006456 2.3e-90 337.4 681 39.9
DCAR_008109 Daucus carota HOM05D005409 ORTHO05D006456 3.0e-90 337.0 645 40.0
Oeu050809.4 Olea europaea HOM05D005409 ORTHO05D006456 3.3e-89 333.6 662 39.9
FvH4_3g03030 Fragaria vesca HOM05D005409 ORTHO05D006456 5.2e-87 326.2 501 44.3
Lsat_1_v5_gn_7_18380 Lactuca sativa HOM05D005409 ORTHO05D006456 6.8e-87 325.9 621 42.2
CDE01G0308 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 2.6e-86 323.9 641 39.5
CDE12G0800 Ceratophyllum demersum HOM05D005409 ORTHO05D006456 2.6e-86 323.9 515 45.6
Migut.M01258 Erythranthe guttata HOM05D005409 ORTHO05D006456 2.6e-86 323.9 638 41.7
Sabra11G0025100 Salix brachista HOM05D005409 ORTHO05D006456 2.9e-85 320.5 648 41.8
CSS0017238 Camellia sinensis var. sinensis HOM05D005409 ORTHO05D006456 7.1e-84 315.8 626 43.9
Potri.007G119200 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.2e-80 305.1 653 40.4
DCAR_004174 Daucus carota HOM05D005409 ORTHO05D006456 2.8e-80 303.9 599 40.2
PGR042G2399 Punica granatum HOM05D005409 ORTHO05D006456 3.6e-80 303.5 660 40.0
Haze_06671 Corylus avellana HOM05D005409 ORTHO05D006456 1.1e-79 302.0 456 45.8
Cpa.g.sc81.2 Carica papaya HOM05D005409 ORTHO05D006456 2.0e-78 297.7 446 46.4
HPP92_000870 Vanilla planifolia HOM05D005409 ORTHO05D006456 2.0e-78 297.7 654 39.8
Aa31LG1G3270 Aethionema arabicum HOM05D005409 ORTHO05D006456 2.6e-78 297.4 637 38.6
Sp1g10100 Schrenkiella parvula HOM05D005409 ORTHO05D006456 6.4e-77 292.7 635 39.5
Potri.017G041300 Populus trichocarpa HOM05D005409 ORTHO05D006456 1.1e-76 292.0 633 41.7
Sabra11G0019200 Salix brachista HOM05D005409 ORTHO05D006456 7.1e-76 289.3 647 39.3
AT1G11480 Arabidopsis thaliana HOM05D005409 ORTHO05D006456 7.8e-75 285.8 636 39.8
Sabra17G0028000 Salix brachista HOM05D005409 ORTHO05D006456 1.0e-74 285.4 703 37.4
Thhalv10007161m.g Eutrema salsugineum HOM05D005409 ORTHO05D006456 1.1e-73 282.0 635 39.4
CARHR011750 Cardamine hirsuta HOM05D005409 ORTHO05D006456 3.6e-72 276.9 636 38.2
TWI38G0167 Tripterygium wilfordii HOM05D005409 ORTHO05D006456 2.6e-70 270.8 580 41.9
Actinidia26959 Actinidia chinensis HOM05D005409 ORTHO05D006456 5.8e-70 269.6 465 44.1
THA.LOC104809524 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 7.6e-70 269.2 636 37.1
Sabra07G0096100 Salix brachista HOM05D005409 ORTHO05D006456 1.7e-69 268.1 757 34.5
A06p08100 Brassica napus HOM05D005409 ORTHO05D006456 5.4e-68 263.1 641 37.8
THA.LOC104818924 Tarenaya hassleriana HOM05D005409 ORTHO05D006456 1.2e-67 261.9 585 37.9
arahy.Tifrunner.gnm1.ann1.XK38U2 Arachis hypogaea HOM05D005409 ORTHO05D006456 2.1e-67 261.2 630 36.3
Actinidia24044 Actinidia chinensis HOM05D005409 ORTHO05D006456 3.5e-67 260.4 510 40.8
SGA_v2.0_scaffold7G03896 Striga asiatica HOM05D005409 ORTHO05D006456 3.5e-67 260.4 686 36.3
BraA06t24009Z Brassica rapa HOM05D005409 ORTHO05D006456 7.9e-67 259.2 614 38.6
AL1G22590 Arabidopsis lyrata HOM05D005409 ORTHO05D006456 3.0e-66 257.3 642 36.9
RcHm_v2.0_Chr5g0004681 Rosa chinensis HOM05D005409 ORTHO05D006456 8.7e-66 255.8 501 39.7
Actinidia26760 Actinidia chinensis HOM05D005409 ORTHO05D006456 1.9e-65 254.6 481 39.1
BcaC05g25024 Brassica carinata HOM05D005409 ORTHO05D006456 2.1e-64 251.1 648 36.9
Carub.0001s1109 Capsella rubella HOM05D005409 ORTHO05D006456 2.8e-64 250.8 619 36.2
C05p09680 Brassica napus HOM05D005409 ORTHO05D006456 8.1e-64 249.2 648 36.9
SalBow8G4343 Salvia bowleyana HOM05D005409 ORTHO05D006456 6.9e-63 246.1 472 41.3
BolC5t29709H Brassica oleracea HOM05D005409 ORTHO05D006456 1.7e-61 241.5 621 37.0
arahy.Tifrunner.gnm1.ann1.QZ9QK3 Arachis hypogaea HOM05D005409 ORTHO05D006456 2.9e-61 240.7 673 34.3
ATR0804G077 Amborella trichopoda HOM05D005409 ORTHO05D006456 4.6e-59 233.4 737 37.2
Atru.chr6.3116 Acer truncatum HOM05D005409 ORTHO05D006456 1.6e-56 224.9 454 40.1
Os07g0546100 Oryza sativa ssp. japonica HOM05D005409 ORTHO05D006456 3.2e-52 210.7 661 35.4
Atru.chr10.2048 Acer truncatum HOM05D005409 ORTHO05D006456 2.1e-51 208.0 366 41.8
Oeu050499.1 Olea europaea HOM05D005409 ORTHO05D006456 5.1e-50 203.4 451 39.2
BcaNung07116 Brassica carinata HOM05D005409 ORTHO05D006456 1.9e-49 201.4 433 38.6
Zm00001eb323520 Zea mays HOM05D005409 ORTHO05D006456 9.0e-47 192.6 638 35.0
GSVIVG01006635001 Vitis vinifera HOM05D005409 ORTHO05D006456 2.5e-44 184.5 155 64.5
Ah.09g237100 Amaranthus hybridus HOM05D000067 ORTHO05D006456 6.1e-43 179.9 608 31.9
RcHm_v2.0_Chr5g0004671 Rosa chinensis HOM05D005409 ORTHO05D006456 2.6e-38 164.5 122 68.9
Cpa.g.sc81.1 Carica papaya HOM05D005409 ORTHO05D006456 5.7e-33 146.7 185 50.3
Atru.chr10.2047 Acer truncatum HOM05D005409 ORTHO05D006456 1.2e-30 139.0 251 41.8
SMO118G0050 Selaginella moellendorffii HOM05D005409 ORTHO05D006456 3.5e-22 110.9 747 26.8
Mapoly0113s0049 Marchantia polymorpha HOM05D005409 ORTHO05D006456 8.5e-21 106.3 108 56.5
Zm00001eb106500 Zea mays HOM05D005409 ORTHO05D006456 6.1e-19 100.1 427 32.1
Pp3c20_3440 Physcomitrium patens HOM05D005409 ORTHO05D006456 8.0e-19 99.8 109 52.3
AagrBONN_evm.TU.Sc2ySwM_228.455 Anthoceros agrestis HOM05D005409 ORTHO05D006456 3.0e-18 97.8 117 51.3
Atru.chr6.3115 Acer truncatum HOM05D005409 ORTHO05D006456 3.1e-15 87.8 194 35.6
CBR_g36658 Chara braunii HOM05D005409 ORTHO05D006456 8.5e-13 79.7 121 43.0
SEGI_29006 Sequoiadendron giganteum HOM05D005409 ORTHO05D006456 1.1e-12 79.3 260 36.5
Haze_06667 Corylus avellana HOM05D005409 ORTHO05D006456 4.8e-08 63.9 195 31.8


User provided reference genes

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