Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2903 Papaver somniferum HOM05D001568 ORTHO05D009161 4.6e-91 337.8 161 100.0
PSO675G4557 Papaver somniferum HOM05D001568 ORTHO05D009161 7.3e-81 303.9 148 96.6
PSO541G3645 Papaver somniferum HOM05D001568 ORTHO05D009161 1.7e-69 266.2 149 81.9
TAR625G0338 Trochodendron aralioides HOM05D001568 ORTHO05D009161 4.4e-62 241.5 149 77.2
FvH4_2g03390 Fragaria vesca HOM05D001568 ORTHO05D009161 2.2e-61 239.2 151 73.5
Nn5g30651 Nelumbo nucifera HOM05D001568 ORTHO05D009161 2.9e-61 238.8 143 74.1
RcHm_v2.0_Chr6g0248511 Rosa chinensis HOM05D001568 ORTHO05D009161 2.9e-61 238.8 151 74.8
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 4.2e-60 235.0 149 73.8
FvH4_2g03350 Fragaria vesca HOM05D001568 ORTHO05D009161 7.1e-60 234.2 151 71.5
FAN15G0831 Fragaria x ananassa HOM05D001568 ORTHO05D009161 7.1e-60 234.2 151 71.5
Aqoxy5G00361 Aquilegia oxysepala HOM05D001568 ORTHO05D009161 9.3e-60 233.8 144 76.4
Nitab4.5_0011705g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 9.3e-60 233.8 142 77.5
Nitab4.5_0001458g0020 Nicotiana tabacum HOM05D001568 ORTHO05D009161 1.2e-59 233.4 142 76.1
FAN27G2772 Fragaria x ananassa HOM05D001568 ORTHO05D009161 1.6e-59 233.0 151 71.5
QL11p029372 Quercus lobata HOM05D001568 ORTHO05D009161 1.6e-59 233.0 153 71.2
Prupe.8G149700 Prunus persica HOM05D001568 ORTHO05D009161 4.6e-59 231.5 149 71.8
CiPaw.06G164200 Carya illinoinensis HOM05D001568 ORTHO05D009161 6.0e-59 231.1 156 68.6
Cfa004703 Carpinus fangiana HOM05D001568 ORTHO05D009161 1.0e-58 230.3 153 70.6
MD10G1109900 Malus domestica HOM05D001568 ORTHO05D009161 1.7e-58 229.6 145 73.1
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 2.3e-58 229.2 140 74.3
FAN24G0656 Fragaria x ananassa HOM05D001568 ORTHO05D009161 2.3e-58 229.2 151 70.2
Potri.009G085700 Populus trichocarpa HOM05D001568 ORTHO05D009161 3.0e-58 228.8 152 67.1
Aa31LG8G12780 Aethionema arabicum HOM05D006229 ORTHO05D007190 5.1e-58 228.0 141 73.8
Rhsim05G0092800 Rhododendron simsii HOM05D001568 ORTHO05D009161 8.7e-58 227.3 144 72.9
CAN.G1427.5 Capsicum annuum HOM05D001568 ORTHO05D009161 1.9e-57 226.1 151 71.5
Cc00_g18000 Coffea canephora HOM05D001568 ORTHO05D009161 4.3e-57 224.9 146 73.3
Thhalv10023010m.g Eutrema salsugineum HOM05D001568 ORTHO05D009161 4.3e-57 224.9 153 69.9
COL.COLO4_32488 Corchorus olitorius HOM05D001568 ORTHO05D009161 7.3e-57 224.2 158 65.8
Prupe.8G150000 Prunus persica HOM05D001568 ORTHO05D009161 1.3e-56 223.4 147 70.1
MBI16_g39097_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 1.6e-56 223.0 138 72.5
Sp3g27770 Schrenkiella parvula HOM05D001568 ORTHO05D009161 1.6e-56 223.0 146 73.3
Duzib132G0829 Durio zibethinus HOM05D001568 ORTHO05D009161 2.1e-56 222.6 145 71.0
Solyc10g048190.1 Solanum lycopersicum HOM05D001568 ORTHO05D009161 2.8e-56 222.2 135 78.5
Sabra09G0065800 Salix brachista HOM05D001568 ORTHO05D009161 3.6e-56 221.9 146 68.5
Peaxi162Scf00003g02812 Petunia axillaris HOM05D001568 ORTHO05D009161 8.1e-56 220.7 146 71.9
Gohir.A13G047700 Gossypium hirsutum HOM05D001568 ORTHO05D009161 1.1e-55 220.3 146 69.9
PGSC0003DMG400012841 Solanum tuberosum HOM05D001568 ORTHO05D009161 1.1e-55 220.3 139 73.4
Carub.0003s2869 Capsella rubella HOM05D001568 ORTHO05D009161 1.4e-55 219.9 148 70.3
AL3G46300 Arabidopsis lyrata HOM05D001568 ORTHO05D009161 1.8e-55 219.5 154 69.5
Duzib248G0869 Durio zibethinus HOM05D001568 ORTHO05D009161 1.8e-55 219.5 146 69.2
Gorai.013G051500 Gossypium raimondii HOM05D001568 ORTHO05D009161 4.0e-55 218.4 146 68.5
THA.LOC104804397 Tarenaya hassleriana HOM05D001568 ORTHO05D009161 4.0e-55 218.4 155 67.7
Gohir.D13G046000 Gossypium hirsutum HOM05D001568 ORTHO05D009161 5.3e-55 218.0 146 68.5
A07p05700 Brassica napus HOM05D001568 ORTHO05D009161 1.2e-54 216.9 143 72.7
A07p05850 Brassica napus HOM05D001568 ORTHO05D009161 1.2e-54 216.9 145 71.7
BraA07t28378Z Brassica rapa HOM05D001568 ORTHO05D009161 1.2e-54 216.9 143 72.7
ClCG10G010070 Citrullus lanatus HOM05D001568 ORTHO05D009161 3.4e-54 215.3 148 70.3
MELO3C018021.2 Cucumis melo HOM05D001568 ORTHO05D009161 3.4e-54 215.3 148 70.3
Atru.chr5.2303 Acer truncatum HOM05D001568 ORTHO05D009161 4.5e-54 214.9 145 69.7
Lsat_1_v5_gn_5_117140 Lactuca sativa HOM05D001568 ORTHO05D009161 4.5e-54 214.9 152 69.1
BcaB05g22586 Brassica carinata HOM05D001568 ORTHO05D009161 5.8e-54 214.5 141 72.3
BcaC06g36001 Brassica carinata HOM05D001568 ORTHO05D009161 5.8e-54 214.5 136 73.5
C07p09120 Brassica napus HOM05D001568 ORTHO05D009161 5.8e-54 214.5 136 73.5
BolC7t41323H Brassica oleracea HOM05D001568 ORTHO05D009161 5.8e-54 214.5 136 73.5
CANSAT25G2862 Cannabis sativa HOM05D001568 ORTHO05D009161 1.3e-53 213.4 146 67.1
Manes.10G086600 Manihot esculenta HOM05D001568 ORTHO05D009161 1.3e-53 213.4 146 67.8
Thecc.02G119600 Theobroma cacao HOM05D001568 ORTHO05D009161 1.3e-53 213.4 146 67.8
BraA07t28366Z Brassica rapa HOM05D001568 ORTHO05D009161 2.9e-53 212.2 144 72.2
CARHR286340 Cardamine hirsuta HOM05D001568 ORTHO05D009161 3.8e-53 211.8 137 72.3
CsaV3_4G000110 Cucumis sativus L. HOM05D001568 ORTHO05D009161 6.4e-53 211.1 148 68.9
TWI59G0351 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 6.4e-53 211.1 158 65.2
AT2G14660 Arabidopsis thaliana HOM05D001568 ORTHO05D009161 1.1e-52 210.3 157 65.6
TPR.G8318 Trifolium pratense HOM05D001568 ORTHO05D009161 1.4e-52 209.9 144 70.8
Actinidia27999 Actinidia chinensis HOM05D001568 ORTHO05D009161 1.9e-52 209.5 129 74.4
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 1.9e-52 209.5 138 70.3
Lalb_Chr20g0110071 Lupinus albus HOM05D001568 ORTHO05D009161 2.4e-52 209.1 151 68.9
Medtr5g005350 Medicago truncatula HOM05D001568 ORTHO05D009161 5.4e-52 208.0 140 74.3
Sc01g0002530 Simmondsia chinensis HOM05D001568 ORTHO05D009161 1.6e-51 206.5 145 68.3
TWI23G0417 Tripterygium wilfordii HOM05D001568 ORTHO05D009161 3.5e-51 205.3 148 67.6
Ah.08g217180 Amaranthus hybridus HOM05D001035 ORTHO05D001045 2.3e-50 202.6 145 67.6
unitig_0.g633 Utricularia gibba HOM05D001568 ORTHO05D009161 2.3e-50 202.6 139 69.1
HanXRQChr10g0305111 Helianthus annuus HOM05D001568 ORTHO05D009161 3.0e-50 202.2 155 65.2
Sed0014293 Sechium edule HOM05D001568 ORTHO05D009161 3.9e-50 201.8 147 67.3
Cpa.g.sc91.59 Carica papaya HOM05D001568 ORTHO05D009161 5.1e-50 201.4 141 66.7
Migut.B00461 Erythranthe guttata HOM05D001568 ORTHO05D009161 6.7e-50 201.1 149 67.1
MSTRG.20237 Avicennia marina HOM05D001568 ORTHO05D009161 1.1e-49 200.3 148 66.9
CDE07G0917 Ceratophyllum demersum HOM05D001568 ORTHO05D009161 1.5e-49 199.9 139 67.6
PGR142G3835 Punica granatum HOM05D001568 ORTHO05D009161 1.9e-49 199.5 153 62.1
Lj1g0027535 Lotus japonicus HOM05D001568 ORTHO05D009161 2.5e-49 199.1 138 69.6
Glyma.01G241600 Glycine max HOM05D001568 ORTHO05D009161 3.3e-49 198.7 140 70.0
Phvul.002G050900 Phaseolus vulgaris HOM05D001568 ORTHO05D009161 1.3e-48 196.8 135 71.9
VMungo1215G1258 Vigna mungo HOM05D001568 ORTHO05D009161 1.6e-48 196.4 142 69.0
CSS0003584 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D009161 2.8e-48 195.7 143 65.7
SGA_v2.0_scaffold32G12987 Striga asiatica HOM05D001568 ORTHO05D009161 8.1e-48 194.1 139 66.9
EL10Ac1g00245 Beta vulgaris HOM05D001568 ORTHO05D009161 1.8e-47 193.0 144 66.0
HPP92_026656 Vanilla planifolia HOM05D001568 ORTHO05D009161 2.9e-45 185.7 147 59.9
HPP92_015706 Vanilla planifolia HOM05D001568 ORTHO05D009161 3.8e-45 185.3 147 59.9
ATR0739G196 Amborella trichopoda HOM05D001568 ORTHO05D009161 4.9e-45 184.9 134 61.2
MBI16_g27033_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D009161 2.4e-44 182.6 138 61.6
SHI05019 Sapria himalayana HOM05D001568 ORTHO05D009161 5.5e-44 181.4 152 55.9
SEGI_07672 Sequoiadendron giganteum HOM05D001568 ORTHO05D009161 1.9e-41 172.9 135 60.0
Os03g0676100 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 1.2e-38 163.7 155 52.9
Zm00001eb217400 Zea mays HOM05D001568 ORTHO05D009161 7.6e-38 161.0 150 54.7
CBR_g38178 Chara braunii HOM05D001568 ORTHO05D009161 3.8e-37 158.7 134 56.0
Lj9P337T35 Lonicera japonica HOM05D001568 ORTHO05D009161 1.4e-36 156.8 105 70.5
Mapoly0117s0004 Marchantia polymorpha HOM05D001568 ORTHO05D009161 3.2e-36 155.6 133 54.9
AagrBONN_evm.TU.Sc2ySwM_117.3519 Anthoceros agrestis HOM05D001568 ORTHO05D009161 3.5e-35 152.1 133 54.1
Medtr8g027785 Medicago truncatula HOM05D001568 ORTHO05D009161 3.5e-35 152.1 151 54.3
Sopen10g020220 Solanum pennellii HOM05D001568 ORTHO05D009161 3.3e-33 145.6 95 74.7
Pp3c10_11040 Physcomitrium patens HOM05D001568 ORTHO05D009161 1.6e-32 143.3 140 50.7
AUR62004510 Chenopodium quinoa HOM05D001568 ORTHO05D009161 4.5e-30 135.2 105 64.8
Psat4g228720 Pisum sativum HOM05D001568 ORTHO05D009161 4.5e-30 135.2 95 68.4
AUR62023444 Chenopodium quinoa HOM05D001568 ORTHO05D009161 5.9e-30 134.8 102 63.7
Oeu037289.1 Olea europaea HOM05D001568 ORTHO05D009161 6.5e-29 131.3 151 48.3
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 8.5e-29 131.0 147 49.0
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 1.2e-22 110.5 135 43.7
BcaB03g16261 Brassica carinata HOM05D001568 ORTHO05D009161 1.0e-18 97.4 113 46.9
MD05G1105400 Malus domestica HOM05D001568 ORTHO05D009161 1.0e-18 97.4 74 59.5
ECA234G4452 Erigeron canadensis HOM05D000058 ORTHO05D000255 1.1e-17 94.0 80 60.0
Cre12.g497650 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D009161 2.0e-17 93.2 154 37.7
MCO07G364 Micromonas commoda HOM05D001568 ORTHO05D009161 5.7e-17 91.7 167 36.5
Os08g0485300 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D009161 6.3e-16 88.2 103 47.6
COL.COLO4_02194 Corchorus olitorius HOM05D001568 ORTHO05D009161 3.9e-10 68.9 102 37.3
Cfa026913 Carpinus fangiana HOM05D001568 ORTHO05D009161 4.5e-06 55.5 183 26.8


User provided reference genes

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