Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2877 Papaver somniferum HOM05D006901 ORTHO05D008582 1.1e-78 296.6 159 100.0
PSO675G2506 Papaver somniferum HOM05D006901 ORTHO05D008582 1.7e-74 282.7 159 96.2
Nn6g32189 Nelumbo nucifera HOM05D006901 ORTHO05D008582 4.7e-40 168.3 178 57.9
TAR376G0851 Trochodendron aralioides HOM05D006901 ORTHO05D008582 2.0e-38 162.9 178 57.9
Nn5g28858 Nelumbo nucifera HOM05D006901 ORTHO05D008582 5.6e-33 144.8 178 55.1
Medtr1g097570 Medicago truncatula HOM05D006901 ORTHO05D008582 7.3e-33 144.4 164 57.9
Phvul.007G084500 Phaseolus vulgaris HOM05D006901 ORTHO05D008582 7.3e-33 144.4 162 56.8
Actinidia17766 Actinidia chinensis HOM05D006901 ORTHO05D008582 4.7e-32 141.7 168 54.8
Sc02g0003760 Simmondsia chinensis HOM05D006901 ORTHO05D008582 2.3e-31 139.4 169 52.7
Dinv02470 Davidia involucrata HOM05D006901 ORTHO05D008582 3.1e-31 139.0 169 55.0
TPR.G792 Trifolium pratense HOM05D006901 ORTHO05D008582 6.8e-31 137.9 163 57.7
Glyma.20G171000 Glycine max HOM05D006901 ORTHO05D008582 8.9e-31 137.5 166 54.8
Rhsim06G0092600 Rhododendron simsii HOM05D006901 ORTHO05D008582 2.0e-30 136.3 168 54.8
VMungo0720G0575 Vigna mungo HOM05D006901 ORTHO05D008582 4.4e-30 135.2 145 57.9
Psat6g189960 Pisum sativum HOM05D006901 ORTHO05D008582 5.8e-30 134.8 156 59.0
CAN.G1183.19 Capsicum annuum HOM05D006901 ORTHO05D008582 7.6e-30 134.4 166 53.0
Nitab4.5_0003443g0040 Nicotiana tabacum HOM05D006901 ORTHO05D008582 7.6e-30 134.4 163 55.8
Glyma.10G220600 Glycine max HOM05D006901 ORTHO05D008582 1.3e-29 133.7 164 54.3
Hma1.2p1_0678F.1_g202120 Hydrangea macrophylla HOM05D006901 ORTHO05D008582 1.3e-29 133.7 167 55.1
Ca_10653_v3 Cicer arietinum L. HOM05D006901 ORTHO05D008582 1.7e-29 133.3 162 56.8
Lalb_Chr21g0305611 Lupinus albus HOM05D006901 ORTHO05D008582 2.9e-29 132.5 164 56.1
RcHm_v2.0_Chr6g0273991 Rosa chinensis HOM05D006901 ORTHO05D008582 2.9e-29 132.5 154 54.5
QL02p036605 Quercus lobata HOM05D006901 ORTHO05D008582 3.7e-29 132.1 163 55.8
GSVIVG01013704001 Vitis vinifera HOM05D006901 ORTHO05D008582 3.7e-29 132.1 171 52.0
FAN15G3138 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.4e-29 131.3 155 53.5
FAN20G0005 Fragaria x ananassa HOM05D006901 ORTHO05D008582 6.4e-29 131.3 155 53.5
Ah.16g108540 Amaranthus hybridus HOM05D006901 ORTHO05D008582 8.4e-29 131.0 167 54.5
Potri.005G198100 Populus trichocarpa HOM05D006901 ORTHO05D008582 8.4e-29 131.0 182 48.4
QL02p037117 Quercus lobata HOM05D006901 ORTHO05D008582 8.4e-29 131.0 162 56.2
CiPaw.16G007900 Carya illinoinensis HOM05D006901 ORTHO05D008582 1.1e-28 130.6 177 51.4
Nitab4.5_0003178g0070 Nicotiana tabacum HOM05D006901 ORTHO05D008582 1.1e-28 130.6 162 54.3
CSS0011226 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.4e-28 130.2 166 53.0
CSS0025966 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 1.4e-28 130.2 166 53.0
MD05G1035400 Malus domestica HOM05D006901 ORTHO05D008582 3.2e-28 129.0 177 50.3
Actinidia15615 Actinidia chinensis HOM05D006901 ORTHO05D008582 4.1e-28 128.6 133 59.4
FvH4_2g12890 Fragaria vesca HOM05D006901 ORTHO05D008582 4.1e-28 128.6 154 51.9
FAN24G1802 Fragaria x ananassa HOM05D006901 ORTHO05D008582 4.1e-28 128.6 154 51.9
Solyc04g072038.1 Solanum lycopersicum HOM05D006901 ORTHO05D008582 4.1e-28 128.6 163 53.4
Sopen04g028100 Solanum pennellii HOM05D006901 ORTHO05D008582 5.4e-28 128.3 163 53.4
Prupe.8G043100 Prunus persica HOM05D006901 ORTHO05D008582 1.2e-27 127.1 115 65.2
FAN27G3188 Fragaria x ananassa HOM05D006901 ORTHO05D008582 1.6e-27 126.7 155 52.9
MD10G1037700 Malus domestica HOM05D006901 ORTHO05D008582 1.6e-27 126.7 174 48.9
CANSAT25G0969 Cannabis sativa HOM05D006901 ORTHO05D008582 2.1e-27 126.3 177 49.2
Potri.002G063100 Populus trichocarpa HOM05D006901 ORTHO05D008582 2.1e-27 126.3 184 48.9
PGSC0003DMG400025056 Solanum tuberosum HOM05D006901 ORTHO05D008582 2.7e-27 125.9 163 52.8
Atru.chr13.1989 Acer truncatum HOM05D006901 ORTHO05D008582 3.5e-27 125.6 161 54.0
ClCG08G007260 Citrullus lanatus HOM05D006901 ORTHO05D008582 6.0e-27 124.8 155 52.3
Duzib041G0277 Durio zibethinus HOM05D006901 ORTHO05D008582 6.0e-27 124.8 171 52.6
Sabra02G0050800 Salix brachista HOM05D006901 ORTHO05D008582 6.0e-27 124.8 182 47.3
Ciclev10002626m.g Citrus clementina HOM05D006901 ORTHO05D008582 1.0e-26 124.0 185 50.3
Sabra05G0150900 Salix brachista HOM05D006901 ORTHO05D008582 1.0e-26 124.0 179 47.5
Duzib116G0108 Durio zibethinus HOM05D006901 ORTHO05D008582 1.3e-26 123.6 171 52.0
Haze_17820 Corylus avellana HOM05D006901 ORTHO05D008582 1.7e-26 123.2 175 48.6
Lsat_1_v5_gn_1_5120 Lactuca sativa HOM05D006901 ORTHO05D008582 1.7e-26 123.2 162 50.6
arahy.Tifrunner.gnm1.ann1.96Y3Q8 Arachis hypogaea HOM05D006901 ORTHO05D008582 3.0e-26 122.5 99 71.7
Cc10_g06470 Coffea canephora HOM05D006901 ORTHO05D008582 3.0e-26 122.5 169 49.1
EL10Ac1g01620 Beta vulgaris HOM05D006901 ORTHO05D008582 5.1e-26 121.7 177 50.8
Lj7E386T0 Lonicera japonica HOM05D006901 ORTHO05D008582 5.1e-26 121.7 86 77.9
Gohir.D06G116100 Gossypium hirsutum HOM05D006901 ORTHO05D008582 6.6e-26 121.3 167 50.3
Gorai.010G133900 Gossypium raimondii HOM05D006901 ORTHO05D008582 6.6e-26 121.3 167 50.3
HanXRQChr02g0041271 Helianthus annuus HOM05D006901 ORTHO05D008582 6.6e-26 121.3 162 48.8
Thecc.08G162300 Theobroma cacao HOM05D006901 ORTHO05D008582 6.6e-26 121.3 166 52.4
arahy.Tifrunner.gnm1.ann1.YZ7MCJ Arachis hypogaea HOM05D006901 ORTHO05D008582 1.5e-25 120.2 127 59.1
MELO3C019969.2 Cucumis melo HOM05D006901 ORTHO05D008582 1.9e-25 119.8 92 70.7
CsaV3_6G004930 Cucumis sativus L. HOM05D006901 ORTHO05D008582 1.9e-25 119.8 92 70.7
Manes.18G095700 Manihot esculenta HOM05D006901 ORTHO05D008582 2.5e-25 119.4 182 48.9
MSTRG.22112 Avicennia marina HOM05D006901 ORTHO05D008582 3.3e-25 119.0 155 49.7
Lj5g0019877 Lotus japonicus HOM05D006901 ORTHO05D008582 5.6e-25 118.2 160 50.6
THA.LOC104810483 Tarenaya hassleriana HOM05D006901 ORTHO05D008582 5.6e-25 118.2 168 50.0
Aa31LG4G8920 Aethionema arabicum HOM05D006901 ORTHO05D008582 7.3e-25 117.9 129 58.9
EL10Ac4g07716 Beta vulgaris HOM05D006901 ORTHO05D008582 7.3e-25 117.9 166 51.8
AL2G31300 Arabidopsis lyrata HOM05D006901 ORTHO05D008582 9.6e-25 117.5 167 49.7
AT1G71730 Arabidopsis thaliana HOM05D006901 ORTHO05D008582 1.2e-24 117.1 105 64.8
SMO351G0406 Selaginella moellendorffii HOM05D006901 ORTHO05D008582 1.2e-24 117.1 83 75.9
A07p37880 Brassica napus HOM05D006901 ORTHO05D008582 2.1e-24 116.3 156 51.9
BraA07t31353Z Brassica rapa HOM05D006901 ORTHO05D008582 2.1e-24 116.3 156 51.9
CARHR291060 Cardamine hirsuta HOM05D006901 ORTHO05D008582 2.1e-24 116.3 101 64.4
Gohir.A06G111900 Gossypium hirsutum HOM05D006901 ORTHO05D008582 2.1e-24 116.3 153 50.3
Peaxi162Scf00360g00917 Petunia axillaris HOM05D006901 ORTHO05D008582 2.1e-24 116.3 159 50.9
Sed0007149 Sechium edule HOM05D006901 ORTHO05D008582 2.1e-24 116.3 101 66.3
HPP92_002865 Vanilla planifolia HOM05D006901 ORTHO05D008582 2.1e-24 116.3 167 48.5
EL10Ac1g01617 Beta vulgaris HOM05D006901 ORTHO05D008582 2.8e-24 115.9 166 51.2
HPP92_002808 Vanilla planifolia HOM05D006901 ORTHO05D008582 2.8e-24 115.9 146 52.1
Duzib093G0981 Durio zibethinus HOM05D006901 ORTHO05D008582 3.6e-24 115.5 174 48.3
Thhalv10019220m.g Eutrema salsugineum HOM05D006901 ORTHO05D008582 3.6e-24 115.5 144 53.5
BcaC08g46599 Brassica carinata HOM05D006901 ORTHO05D008582 4.7e-24 115.2 126 56.3
C06p45780 Brassica napus HOM05D006901 ORTHO05D008582 4.7e-24 115.2 126 56.3
Carub.0002s1849 Capsella rubella HOM05D006901 ORTHO05D008582 6.2e-24 114.8 164 49.4
SalBow7G3034 Salvia bowleyana HOM05D006901 ORTHO05D008582 8.1e-24 114.4 159 49.7
Sp5g26760 Schrenkiella parvula HOM05D006901 ORTHO05D008582 8.1e-24 114.4 138 55.1
BolC6t39630H Brassica oleracea HOM05D006901 ORTHO05D008582 1.4e-23 113.6 126 55.6
Cpa.g.sc26.114 Carica papaya HOM05D006901 ORTHO05D008582 1.4e-23 113.6 183 44.8
SEGI_14424 Sequoiadendron giganteum HOM05D006901 ORTHO05D008582 1.4e-23 113.6 96 66.7
ECA247G1717 Erigeron canadensis HOM05D006901 ORTHO05D008582 3.1e-23 112.5 86 69.8
PGR102G0180 Punica granatum HOM05D006901 ORTHO05D008582 4.0e-23 112.1 178 46.6
PGR042G3646 Punica granatum HOM05D006901 ORTHO05D008582 6.8e-23 111.3 86 70.9
Eucgr.F02679 Eucalyptus grandis HOM05D006901 ORTHO05D008582 1.2e-22 110.5 89 66.3
TWI60G0595 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 1.5e-22 110.2 125 54.4
ATR1120G022 Amborella trichopoda HOM05D006901 ORTHO05D008582 2.0e-22 109.8 138 51.4
Pp3c17_20520 Physcomitrium patens HOM05D006901 ORTHO05D008582 2.0e-22 109.8 96 65.6
SalBow8G2041 Salvia bowleyana HOM05D006901 ORTHO05D008582 1.3e-21 107.1 142 48.6
TWI34G1320 Tripterygium wilfordii HOM05D006901 ORTHO05D008582 2.2e-21 106.3 122 53.3
CSS0012150 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 4.9e-21 105.1 162 46.9
unitig_32.g11111 Utricularia gibba HOM05D006901 ORTHO05D008582 1.4e-20 103.6 159 45.9
AagrBONN_evm.TU.Sc2ySwM_228.5132 Anthoceros agrestis HOM05D006901 ORTHO05D008582 1.9e-20 103.2 95 60.0
Oeu017620.1 Olea europaea HOM05D006901 ORTHO05D008582 3.2e-20 102.4 152 45.4
Lj5g0009364 Lotus japonicus HOM05D006901 ORTHO05D008582 4.2e-20 102.1 160 48.1
SGA_v2.0_scaffold82G26198 Striga asiatica HOM05D006901 ORTHO05D008582 1.6e-19 100.1 154 42.9
Zm00001eb346910 Zea mays HOM05D006901 ORTHO05D008582 6.0e-19 98.2 98 58.2
Os05g0182000 Oryza sativa ssp. japonica HOM05D006901 ORTHO05D008582 5.1e-18 95.1 83 62.7
DCAR_001194 Daucus carota HOM05D006901 ORTHO05D008582 9.6e-17 90.9 65 76.9
CBR_g54341 Chara braunii HOM05D006901 ORTHO05D008582 9.0e-15 84.3 82 57.3
MCO05G280 Micromonas commoda HOM05D006901 ORTHO05D008582 5.8e-14 81.6 110 43.6
CSS0007119 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 3.8e-13 79.0 86 57.0
CSS0023453 Camellia sinensis var. sinensis HOM05D006901 ORTHO05D008582 2.4e-12 76.3 86 52.3
Cre03.g176500 Chlamydomonas reinhardtii HOM05D006901 ORTHO05D008582 1.0e-10 70.9 94 45.7
PSO447G0065 Papaver somniferum HOM05D017122 ORTHO05D303334 9.6e-09 64.3 142 40.1
Ah.08g214420 Amaranthus hybridus HOM05D006901 ORTHO05D008582 1.3e-08 63.9 59 62.7


User provided reference genes

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