Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 2.0e-178 629.0 328 100.0
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 4.2e-176 621.3 328 91.5
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 2.8e-148 528.9 327 76.1
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 2.4e-147 525.8 324 76.5
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 1.7e-145 519.6 326 76.4
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 3.8e-145 518.5 324 75.0
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 8.5e-145 517.3 325 75.7
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 5.5e-144 514.6 328 73.8
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 7.2e-144 514.2 322 74.2
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 1.2e-143 513.5 328 75.3
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 2.1e-143 512.7 328 73.5
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 4.7e-143 511.5 326 73.3
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 8.0e-143 510.8 326 76.7
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.8e-142 509.6 327 73.4
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 6.8e-142 507.7 325 75.7
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 4.4e-141 505.0 328 71.3
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 9.8e-141 503.8 330 72.4
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 3.7e-140 501.9 329 73.3
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 4.9e-140 501.5 328 72.6
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 1.4e-139 500.0 328 72.6
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 3.1e-139 498.8 326 70.6
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 3.1e-139 498.8 328 72.6
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 6.6e-137 491.1 323 71.2
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.1e-136 490.3 325 70.2
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 1.9e-136 489.6 325 69.5
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 9.5e-136 487.3 288 78.8
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 4.0e-134 481.9 328 78.0
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 5.2e-134 481.5 326 69.3
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 3.4e-133 478.8 326 69.3
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 3.4e-133 478.8 328 77.1
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 4.4e-133 478.4 328 78.0
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 4.4e-133 478.4 324 77.5
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 1.3e-132 476.9 326 68.7
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 1.7e-132 476.5 326 68.7
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 2.9e-132 475.7 326 77.6
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 6.4e-132 474.6 326 68.1
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 1.4e-131 473.4 328 74.7
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 2.4e-131 472.6 327 76.8
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 2.4e-131 472.6 328 77.4
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 3.2e-131 472.2 328 75.9
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 5.4e-131 471.5 326 71.2
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 5.4e-131 471.5 328 76.2
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 7.0e-131 471.1 326 77.3
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 7.0e-131 471.1 328 75.3
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 1.2e-130 470.3 328 74.4
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.2e-130 470.3 326 77.0
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.6e-130 469.9 288 74.3
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 2.7e-130 469.2 328 75.6
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 7.8e-130 467.6 326 76.4
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 1.0e-129 467.2 327 76.1
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 1.0e-129 467.2 327 76.5
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 2.3e-129 466.1 328 74.4
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 3.9e-129 465.3 327 75.2
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 5.0e-129 464.9 328 75.6
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 1.1e-128 463.8 322 76.1
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 3.3e-128 462.2 327 74.6
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 3.3e-128 462.2 327 75.2
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 4.3e-128 461.8 328 75.3
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 7.3e-128 461.1 328 75.0
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 9.5e-128 460.7 328 72.0
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 2.8e-127 459.1 326 74.5
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 4.7e-127 458.4 330 71.5
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 6.2e-127 458.0 328 74.7
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 8.0e-127 457.6 328 74.4
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 8.0e-127 457.6 320 67.5
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 1.8e-126 456.4 328 73.8
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.3e-126 456.1 327 68.8
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 2.3e-126 456.1 328 73.2
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 3.1e-126 455.7 328 74.7
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 5.2e-126 454.9 324 74.4
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 8.9e-126 454.1 330 73.6
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 1.5e-125 453.4 326 69.0
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.0e-125 453.0 328 74.1
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 2.6e-125 452.6 322 66.8
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 7.5e-125 451.1 322 65.5
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 1.3e-124 450.3 328 73.5
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 1.7e-124 449.9 328 74.7
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 6.4e-124 448.0 327 73.4
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 8.3e-124 447.6 328 72.9
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 1.9e-123 446.4 327 73.1
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 2.0e-122 443.0 325 72.3
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 2.7e-122 442.6 327 71.6
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.7e-122 442.6 327 71.9
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 4.6e-122 441.8 327 71.6
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 3.0e-121 439.1 332 71.4
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 3.0e-121 439.1 238 84.5
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 3.9e-121 438.7 332 70.5
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 6.6e-121 438.0 286 70.6
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 2.5e-120 436.0 334 64.1
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.6e-119 433.3 326 71.2
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 1.8e-118 429.9 377 58.4
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 2.0e-117 426.4 237 83.1
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 5.8e-117 424.9 327 69.4
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 1.7e-113 413.3 320 69.7
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 3.9e-113 412.1 321 61.7
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 3.1e-110 402.5 260 73.5
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 7.8e-106 387.9 311 68.8
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 1.3e-105 387.1 328 65.5
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 2.4e-102 376.3 328 63.4
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 4.0e-102 375.6 246 73.6
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 1.9e-96 356.7 322 63.0
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 6.4e-92 341.7 263 73.0
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 1.9e-91 340.1 261 72.0
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 1.3e-89 334.0 279 69.5
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 3.5e-82 309.3 249 71.1
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 9.6e-80 301.2 228 64.5
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 1.6e-79 300.4 374 41.2
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 3.1e-78 296.2 247 69.6
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 6.9e-70 268.5 247 61.1
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 1.5e-64 250.8 330 41.5
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 2.2e-60 236.9 191 61.3
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 9.4e-59 231.5 138 76.8
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 3.0e-57 226.5 189 55.6
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 1.3e-52 211.1 123 75.6
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 4.2e-51 206.1 126 73.8
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 8.0e-42 175.3 94 81.9
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 2.5e-19 100.5 87 60.9
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 1.4e-17 94.7 153 39.2
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 2.6e-16 90.5 83 53.0
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 6.4e-15 85.9 73 57.5
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 5.2e-09 66.2 97 41.2
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 8.3e-07 58.9 52 51.9


User provided reference genes

Program Settings