Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2694 Papaver somniferum HOM05D004415 ORTHO05D005198 9.8e-156 553.5 298 100.0
PSO675G6508 Papaver somniferum HOM05D004415 ORTHO05D005198 3.5e-153 545.0 298 98.0
TAR627G0414 Trochodendron aralioides HOM05D004415 ORTHO05D005198 3.9e-128 461.8 298 77.9
TAR627G1150 Trochodendron aralioides HOM05D004415 ORTHO05D005198 3.9e-128 461.8 298 77.9
Hma1.2p1_0008F-2.1_g005810 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 9.9e-124 447.2 298 75.5
GSVIVG01037942001 Vitis vinifera HOM05D004415 ORTHO05D005198 2.2e-123 446.0 295 76.6
Ciclev10016110m.g Citrus clementina HOM05D004415 ORTHO05D005198 1.1e-122 443.7 298 75.2
Actinidia29247 Actinidia chinensis HOM05D004415 ORTHO05D005198 3.2e-122 442.2 298 75.8
Nn7g37839 Nelumbo nucifera HOM05D004415 ORTHO05D005198 3.2e-122 442.2 298 74.8
Phvul.009G218500 Phaseolus vulgaris HOM05D004415 ORTHO05D005198 7.1e-122 441.0 298 72.1
Dinv03287 Davidia involucrata HOM05D004415 ORTHO05D005198 9.2e-122 440.7 303 75.2
arahy.Tifrunner.gnm1.ann1.ZSFV9B Arachis hypogaea HOM05D004415 ORTHO05D005198 6.0e-121 438.0 298 73.2
vmacro03476 Vaccinium macrocarpon HOM05D004415 ORTHO05D005198 1.0e-120 437.2 298 75.2
Rhsim13G0126400 Rhododendron simsii HOM05D004415 ORTHO05D005198 1.3e-120 436.8 298 75.5
PGR083G0443 Punica granatum HOM05D004415 ORTHO05D005198 1.7e-120 436.4 298 72.5
CANSAT35G0835 Cannabis sativa HOM05D004415 ORTHO05D005198 2.3e-120 436.0 295 73.6
TWI38G1449 Tripterygium wilfordii HOM05D004415 ORTHO05D005198 8.6e-120 434.1 298 73.5
CSS0048897 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 2.5e-119 432.6 298 76.2
Duzib235G0717 Durio zibethinus HOM05D004415 ORTHO05D005198 4.3e-119 431.8 298 73.5
Glyma.15G191200 Glycine max HOM05D004415 ORTHO05D005198 4.3e-119 431.8 298 76.2
Thecc.06G005600 Theobroma cacao HOM05D004415 ORTHO05D005198 5.6e-119 431.4 298 73.8
ATR1098G142 Amborella trichopoda HOM05D004415 ORTHO05D005198 9.6e-119 430.6 297 72.4
Manes.16G062800 Manihot esculenta HOM05D004415 ORTHO05D005198 9.6e-119 430.6 298 73.5
Cfa000755 Carpinus fangiana HOM05D004415 ORTHO05D005198 1.2e-118 430.3 298 74.8
Lj1A1155G52 Lonicera japonica HOM05D004415 ORTHO05D005198 1.2e-118 430.3 298 72.5
Glyma.09G083100 Glycine max HOM05D004415 ORTHO05D005198 2.8e-118 429.1 298 76.2
Potri.001G440600 Populus trichocarpa HOM05D004415 ORTHO05D005198 3.6e-118 428.7 298 73.5
arahy.Tifrunner.gnm1.ann1.UW0JAL Arachis hypogaea HOM05D004415 ORTHO05D005198 6.2e-118 427.9 298 72.1
Gohir.A06G202400 Gossypium hirsutum HOM05D004415 ORTHO05D005198 6.2e-118 427.9 298 73.5
Gorai.010G247000 Gossypium raimondii HOM05D004415 ORTHO05D005198 6.2e-118 427.9 298 73.8
VMungo1309G0873 Vigna mungo HOM05D004415 ORTHO05D005198 6.2e-118 427.9 298 71.5
Atru.chr10.660 Acer truncatum HOM05D004415 ORTHO05D005198 8.1e-118 427.6 298 73.8
CiPaw.09G149000 Carya illinoinensis HOM05D004415 ORTHO05D005198 1.1e-117 427.2 298 72.8
Potri.011G155200 Populus trichocarpa HOM05D004415 ORTHO05D005198 1.4e-117 426.8 298 73.5
Cpa.g.sc173.46 Carica papaya HOM05D004415 ORTHO05D005198 3.1e-117 425.6 296 74.0
CDE06G2804 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 3.1e-117 425.6 298 71.1
SalBow8G0313 Salvia bowleyana HOM05D004415 ORTHO05D005198 6.8e-117 424.5 298 71.8
SalBow8G4844 Salvia bowleyana HOM05D004415 ORTHO05D005198 6.8e-117 424.5 298 71.8
MSTRG.16315 Avicennia marina HOM05D004415 ORTHO05D005198 1.2e-116 423.7 298 71.1
CDE03G0179 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.5e-116 423.3 298 70.5
Migut.M01938 Erythranthe guttata HOM05D004415 ORTHO05D005198 1.5e-116 423.3 298 70.8
Ca_02386_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 2.6e-116 422.5 298 70.8
Aqoxy4G00050 Aquilegia oxysepala HOM05D004415 ORTHO05D005198 4.4e-116 421.8 294 71.4
COL.COLO4_22898 Corchorus olitorius HOM05D004415 ORTHO05D005198 7.6e-116 421.0 298 72.1
MSTRG.7566 Avicennia marina HOM05D004415 ORTHO05D005198 1.3e-115 420.2 298 70.1
FvH4_3g11520 Fragaria vesca HOM05D004415 ORTHO05D005198 1.7e-115 419.9 298 69.8
Lalb_Chr11g0073471 Lupinus albus HOM05D004415 ORTHO05D005198 1.7e-115 419.9 298 71.1
Sabra16G0298000 Salix brachista HOM05D004415 ORTHO05D005198 1.7e-115 419.9 306 71.6
Sabra16G0300000 Salix brachista HOM05D004415 ORTHO05D005198 2.2e-115 419.5 306 71.6
QL05p063115 Quercus lobata HOM05D004415 ORTHO05D005198 3.8e-115 418.7 342 64.0
RcHm_v2.0_Chr5g0018471 Rosa chinensis HOM05D004415 ORTHO05D005198 3.8e-115 418.7 298 69.8
Medtr2g047110 Medicago truncatula HOM05D004415 ORTHO05D005198 4.9e-115 418.3 298 70.5
CSS0002194 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 6.4e-115 417.9 298 72.1
THA.LOC104812930 Tarenaya hassleriana HOM05D004415 ORTHO05D005198 6.4e-115 417.9 295 69.5
Sopen02g018770 Solanum pennellii HOM05D004415 ORTHO05D005198 1.4e-114 416.8 295 70.8
Solyc02g069640.3 Solanum lycopersicum HOM05D004415 ORTHO05D005198 1.9e-114 416.4 295 70.5
PGSC0003DMG400021134 Solanum tuberosum HOM05D004415 ORTHO05D005198 1.9e-114 416.4 295 70.5
Oeu063146.1 Olea europaea HOM05D004415 ORTHO05D005198 2.4e-114 416.0 298 70.5
Lalb_Chr08g0233111 Lupinus albus HOM05D004415 ORTHO05D005198 3.2e-114 415.6 298 69.1
unitig_37.g12064 Utricularia gibba HOM05D004415 ORTHO05D005198 4.2e-114 415.2 298 70.5
MD00G1097300 Malus domestica HOM05D004415 ORTHO05D005198 7.1e-114 414.5 298 69.5
Ah.01g002800 Amaranthus hybridus HOM05D004415 ORTHO05D005198 9.3e-114 414.1 296 70.6
Sc17g0004090 Simmondsia chinensis HOM05D004415 ORTHO05D005198 1.2e-113 413.7 298 70.8
Peaxi162Scf00195g00616 Petunia axillaris HOM05D004415 ORTHO05D005198 2.7e-113 412.5 295 69.2
Sp7g18770 Schrenkiella parvula HOM05D004415 ORTHO05D005198 7.8e-113 411.0 296 70.9
Ca_17811_v3 Cicer arietinum L. HOM05D004415 ORTHO05D005198 1.3e-112 410.2 299 68.6
Thhalv10025893m.g Eutrema salsugineum HOM05D004415 ORTHO05D005198 1.3e-112 410.2 296 70.9
Medtr8g089250 Medicago truncatula HOM05D004415 ORTHO05D005198 3.0e-112 409.1 298 69.1
Hund01093 Selenicereus undatus HOM05D004415 ORTHO05D005198 3.9e-112 408.7 298 70.1
Prupe.4G102500 Prunus persica HOM05D004415 ORTHO05D005198 6.6e-112 407.9 298 70.8
Psat1g018760 Pisum sativum HOM05D004415 ORTHO05D005198 8.7e-112 407.5 298 68.1
TPR.G22904 Trifolium pratense HOM05D004415 ORTHO05D005198 8.7e-112 407.5 293 69.3
CARHR227240 Cardamine hirsuta HOM05D004415 ORTHO05D005198 1.1e-111 407.1 296 69.9
FAN21G2450 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.5e-111 406.8 316 65.5
FAN16G2189 Fragaria x ananassa HOM05D004415 ORTHO05D005198 1.9e-111 406.4 316 65.5
Carub.0007s2075 Capsella rubella HOM05D004415 ORTHO05D005198 2.5e-111 406.0 296 68.9
AT4G20410 Arabidopsis thaliana HOM05D004415 ORTHO05D005198 3.3e-111 405.6 296 68.6
AL7G33480 Arabidopsis lyrata HOM05D004415 ORTHO05D005198 4.3e-111 405.2 296 68.9
ClCG01G008890 Citrullus lanatus HOM05D004415 ORTHO05D005198 4.3e-111 405.2 298 69.5
Os04g0618500 Oryza sativa ssp. japonica HOM05D004415 ORTHO05D005198 4.3e-111 405.2 297 67.0
CSS0010489 Camellia sinensis var. sinensis HOM05D004415 ORTHO05D005198 7.3e-111 404.4 283 72.4
HPP92_013188 Vanilla planifolia HOM05D004415 ORTHO05D005198 9.6e-111 404.1 298 67.8
AUR62025006 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.3e-110 403.7 298 68.8
C01p14410 Brassica napus HOM05D004415 ORTHO05D005198 1.6e-110 403.3 296 68.9
BolC1t01398H Brassica oleracea HOM05D004415 ORTHO05D005198 1.6e-110 403.3 296 68.9
TPR.G6264 Trifolium pratense HOM05D004415 ORTHO05D005198 1.6e-110 403.3 298 67.8
A01p12100 Brassica napus HOM05D004415 ORTHO05D005198 2.8e-110 402.5 296 68.9
Sed0021762 Sechium edule HOM05D004415 ORTHO05D005198 2.8e-110 402.5 298 69.1
AUR62006530 Chenopodium quinoa HOM05D004415 ORTHO05D005198 1.4e-109 400.2 299 68.6
CsaV3_1G037760 Cucumis sativus L. HOM05D004415 ORTHO05D005198 1.4e-109 400.2 298 68.1
SGA_v2.0_scaffold298G47634 Striga asiatica HOM05D004415 ORTHO05D005198 1.8e-109 399.8 298 66.4
BraA01t01153Z Brassica rapa HOM05D004415 ORTHO05D005198 4.0e-109 398.7 296 68.6
FAN25G0769 Fragaria x ananassa HOM05D004415 ORTHO05D005198 4.0e-109 398.7 316 64.2
Lalb_Chr07g0185681 Lupinus albus HOM05D004415 ORTHO05D005198 5.3e-109 398.3 283 70.3
Nitab4.5_0010415g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 9.0e-109 397.5 295 68.5
Nitab4.5_0007613g0030 Nicotiana tabacum HOM05D004415 ORTHO05D005198 1.5e-108 396.7 295 68.5
Sabra11G0144600 Salix brachista HOM05D004415 ORTHO05D005198 1.5e-108 396.7 274 72.6
Gorai.009G116300 Gossypium raimondii HOM05D004415 ORTHO05D005198 2.0e-108 396.4 296 67.9
Eucgr.D01029 Eucalyptus grandis HOM05D004415 ORTHO05D005198 4.4e-108 395.2 269 73.2
EL10Ac9g22486 Beta vulgaris HOM05D004415 ORTHO05D005198 4.9e-107 391.7 275 70.9
ECA236G1935 Erigeron canadensis HOM05D004415 ORTHO05D005198 8.4e-107 391.0 298 67.4
Aa31LG6G2800 Aethionema arabicum HOM05D004415 ORTHO05D005198 2.7e-105 386.0 296 67.6
CAN.G954.7 Capsicum annuum HOM05D004415 ORTHO05D005198 2.7e-105 386.0 282 69.1
arahy.Tifrunner.gnm1.ann1.5MZ6ZS Arachis hypogaea HOM05D004415 ORTHO05D005198 7.9e-105 384.4 298 65.1
arahy.Tifrunner.gnm1.ann1.Z0R64B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.7e-104 383.3 298 64.8
Sed0009944 Sechium edule HOM05D004415 ORTHO05D005198 8.7e-104 380.9 278 69.1
Gohir.D06G219300 Gossypium hirsutum HOM05D004415 ORTHO05D005198 4.3e-103 378.6 250 76.0
Gohir.D05G112100 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.1e-101 374.0 321 65.4
Lsat_1_v5_gn_7_31101 Lactuca sativa HOM05D004415 ORTHO05D005198 4.0e-101 372.1 298 65.1
Haze_05963 Corylus avellana HOM05D004415 ORTHO05D005198 3.1e-93 345.9 298 63.8
Lj6g0004921 Lotus japonicus HOM05D004415 ORTHO05D005198 5.3e-93 345.1 298 65.8
AagrBONN_evm.TU.Sc2ySwM_368.1346 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.3e-91 340.5 292 59.6
Hma1.2p1_0008F-2.1_g005800 Hydrangea macrophylla HOM05D004415 ORTHO05D005198 3.2e-90 335.9 219 75.3
Cc09_g04060 Coffea canephora HOM05D004415 ORTHO05D005198 3.5e-89 332.4 224 75.4
Mapoly0008s0129 Marchantia polymorpha HOM05D004415 ORTHO05D005198 7.4e-87 324.7 295 56.3
AagrBONN_evm.TU.Sc2ySwM_362.579 Anthoceros agrestis HOM05D004415 ORTHO05D005198 2.1e-86 323.2 295 56.3
MELO3C021810.2 Cucumis melo HOM05D004415 ORTHO05D005198 1.8e-85 320.1 224 72.3
Pp3c19_23300 Physcomitrium patens HOM05D004415 ORTHO05D005198 5.3e-85 318.5 291 57.0
AagrBONN_evm.TU.Sc2ySwM_368.3355 Anthoceros agrestis HOM05D004415 ORTHO05D005198 1.2e-84 317.4 273 58.2
HanXRQChr04g0119541 Helianthus annuus HOM05D004415 ORTHO05D005198 1.2e-84 317.4 224 73.2
SMO228G0081 Selaginella moellendorffii HOM05D004415 ORTHO05D005198 3.4e-84 315.8 262 59.2
Zm00001eb431060 Zea mays HOM05D004415 ORTHO05D005198 7.6e-84 314.7 216 69.9
CBR_g24190 Chara braunii HOM05D004415 ORTHO05D005198 4.8e-78 295.4 296 54.1
arahy.Tifrunner.gnm1.ann1.QWIY8B Arachis hypogaea HOM05D004415 ORTHO05D005198 1.4e-77 293.9 280 56.4
Zm00001eb410240 Zea mays HOM05D004415 ORTHO05D005198 5.9e-76 288.5 220 65.0
CDE03G0221 Ceratophyllum demersum HOM05D004415 ORTHO05D005198 1.0e-72 277.7 289 54.0
Duzib043G0003 Durio zibethinus HOM05D004415 ORTHO05D005198 1.9e-66 256.9 178 74.2
CBR_g48904 Chara braunii HOM05D004415 ORTHO05D005198 7.2e-66 255.0 239 54.8
arahy.Tifrunner.gnm1.ann1.09GK0V Arachis hypogaea HOM05D004415 ORTHO05D005198 1.5e-63 247.3 206 62.6
arahy.Tifrunner.gnm1.ann1.6K3MVX Arachis hypogaea HOM05D004415 ORTHO05D005198 1.2e-60 237.7 178 66.3
Gohir.A05G111501 Gossypium hirsutum HOM05D004415 ORTHO05D005198 1.9e-58 230.3 203 62.1
TAR627G0753 Trochodendron aralioides HOM05D004415 ORTHO05D005198 1.3e-54 217.6 135 77.8
MBI02_g43828_MAGBIO Magnolia biondii HOM05D004415 ORTHO05D005198 4.8e-54 215.7 150 70.7
Zm00001eb072080 Zea mays HOM05D004415 ORTHO05D005198 1.1e-53 214.5 143 69.9
SEGI_29507 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 4.1e-53 212.6 162 64.8
arahy.Tifrunner.gnm1.ann1.W2C20P Arachis hypogaea HOM05D004415 ORTHO05D005198 2.7e-52 209.9 150 68.0
MCO11G422 Micromonas commoda HOM05D004415 ORTHO05D005198 9.5e-42 174.9 265 37.0
Oeu063144.1 Olea europaea HOM05D004415 ORTHO05D005198 8.0e-41 171.8 183 54.1
PRCOL_00005341 Prasinoderma coloniale HOM05D004415 ORTHO05D005198 1.2e-39 167.9 307 39.4
VMungo0464G1344 Vigna mungo HOM05D004415 ORTHO05D005198 6.3e-38 162.2 107 75.7
SEGI_22365 Sequoiadendron giganteum HOM05D004415 ORTHO05D005198 3.6e-33 146.4 108 71.3
Zm00001eb266710 Zea mays HOM05D004415 ORTHO05D005198 2.0e-31 140.6 99 65.7
arahy.Tifrunner.gnm1.ann1.NJ63RV Arachis hypogaea HOM05D004415 ORTHO05D005198 2.6e-31 140.2 144 52.1
Cre08.g385700 Chlamydomonas reinhardtii HOM05D004415 ORTHO05D005198 1.3e-22 111.3 171 32.7
FvH4_3g11480 Fragaria vesca HOM05D004415 ORTHO05D005198 4.9e-22 109.4 82 69.5
arahy.Tifrunner.gnm1.ann1.YAAB6X Arachis hypogaea HOM05D004415 ORTHO05D005198 3.2e-21 106.7 103 54.4
SGA_v2.0_scaffold298G47629 Striga asiatica HOM05D004415 ORTHO05D005198 2.2e-14 84.0 106 47.2
arahy.Tifrunner.gnm1.ann1.479FYN Arachis hypogaea HOM05D004415 ORTHO05D005198 1.1e-13 81.6 66 63.6
Cc09_g04070 Coffea canephora HOM05D004415 ORTHO05D005198 6.0e-12 75.9 65 60.0
HanXRQChr04g0119531 Helianthus annuus HOM05D004415 ORTHO05D005198 2.5e-10 70.5 39 82.1
arahy.Tifrunner.gnm1.ann1.LII2ER Arachis hypogaea HOM05D004415 ORTHO05D005198 4.0e-08 63.2 106 38.7
GSVIVG01003362001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.2e-08 62.8 52 57.7
arahy.Tifrunner.gnm1.ann1.8SCZ96 Arachis hypogaea HOM05D004415 ORTHO05D005198 3.4e-07 60.1 106 37.7
GSVIVG01005645001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.8e-07 59.3 52 53.8
GSVIVG01032305001 Vitis vinifera HOM05D004415 ORTHO05D005198 5.8e-07 59.3 52 53.8
VMungo0331G0484 Vigna mungo HOM05D003730 ORTHO05D005198 4.9e-06 56.2 44 59.1


User provided reference genes

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