Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 4.9e-106 387.9 205 100.0
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 3.6e-101 371.7 205 94.1
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 6.3e-61 238.0 202 64.4
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 5.7e-54 214.9 205 58.5
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 8.2e-53 211.1 166 67.5
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 2.4e-52 209.5 201 60.7
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 2.4e-52 209.5 184 61.4
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 5.3e-52 208.4 195 59.0
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.3e-50 203.8 162 64.8
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 1.7e-50 203.4 152 69.7
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 5.0e-50 201.8 191 60.7
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 8.5e-50 201.1 161 64.0
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 8.5e-50 201.1 164 65.9
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 8.5e-50 201.1 173 60.7
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.1e-49 200.7 202 55.4
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 1.9e-49 199.9 180 61.7
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 1.9e-49 199.9 178 61.8
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 2.5e-49 199.5 168 64.9
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 2.5e-49 199.5 194 55.7
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 3.2e-49 199.1 159 66.7
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 3.2e-49 199.1 186 60.2
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 4.2e-49 198.7 164 65.2
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 5.5e-49 198.4 213 52.6
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 7.2e-49 198.0 179 65.4
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 7.2e-49 198.0 166 68.7
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 9.4e-49 197.6 200 56.5
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.2e-48 197.2 185 63.2
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.2e-48 197.2 163 68.1
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 1.2e-48 197.2 184 58.7
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 1.2e-48 197.2 208 52.9
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.7e-48 196.1 202 55.4
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 3.6e-48 195.7 213 55.4
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 3.6e-48 195.7 213 55.4
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.8e-47 193.4 163 61.3
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 1.8e-47 193.4 215 53.5
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 2.3e-47 193.0 155 67.7
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 3.0e-47 192.6 164 64.0
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 5.1e-47 191.8 188 62.8
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 6.7e-47 191.4 185 59.5
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.1e-46 190.7 153 67.3
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 2.0e-46 189.9 169 65.7
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 4.4e-46 188.7 153 66.7
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 4.4e-46 188.7 160 61.9
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 4.4e-46 188.7 153 66.0
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 4.4e-46 188.7 158 64.6
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 5.7e-46 188.3 181 56.4
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 5.7e-46 188.3 137 64.2
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 9.7e-46 187.6 156 61.5
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 2.8e-45 186.0 153 62.1
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 3.7e-45 185.7 227 51.1
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 3.7e-45 185.7 110 77.3
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 8.2e-45 184.5 217 51.2
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 8.2e-45 184.5 168 60.7
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 8.2e-45 184.5 195 54.9
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 3.1e-44 182.6 153 65.4
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 5.3e-44 181.8 163 60.1
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 5.3e-44 181.8 195 53.8
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 5.3e-44 181.8 165 60.0
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 6.9e-44 181.4 214 54.2
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 9.1e-44 181.0 178 56.2
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.2e-43 180.6 109 75.2
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 2.0e-43 179.9 196 55.1
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.0e-43 179.9 162 58.0
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 2.0e-43 179.9 165 64.8
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.6e-43 179.5 193 56.0
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 2.6e-43 179.5 161 57.8
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 4.5e-43 178.7 166 58.4
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 5.9e-43 178.3 162 56.2
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 5.9e-43 178.3 177 58.2
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 1.0e-42 177.6 153 64.1
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.7e-42 176.8 176 57.4
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 1.7e-42 176.8 192 54.7
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 2.2e-42 176.4 190 57.9
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.2e-42 176.4 168 56.5
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 2.9e-42 176.0 161 57.1
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 3.8e-42 175.6 189 52.4
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 3.8e-42 175.6 166 61.4
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 6.5e-42 174.9 196 53.6
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 1.4e-41 173.7 150 62.0
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.9e-41 173.3 169 56.8
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.9e-41 173.3 154 63.0
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 3.2e-41 172.6 193 52.3
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 3.2e-41 172.6 166 59.6
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 4.2e-41 172.2 110 73.6
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 5.5e-41 171.8 148 60.1
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 5.5e-41 171.8 148 60.1
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 7.2e-41 171.4 148 60.1
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 7.2e-41 171.4 148 60.1
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.6e-40 170.2 164 56.7
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 2.1e-40 169.9 153 60.1
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 2.7e-40 169.5 148 59.5
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 4.7e-40 168.7 190 49.5
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.8e-39 166.8 146 64.4
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 6.7e-39 164.9 174 55.2
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 4.4e-38 162.2 108 65.7
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 6.3e-37 158.3 199 50.8
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 2.4e-36 156.4 164 53.7
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 3.1e-36 156.0 121 62.0
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 7.0e-36 154.8 108 67.6
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.2e-35 154.1 199 46.2
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 1.6e-35 153.7 152 55.9
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 5.0e-34 148.7 103 68.9
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 7.2e-33 144.8 135 55.6
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.2e-32 144.1 188 48.9
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.5e-30 137.1 91 70.3
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 2.8e-29 132.9 121 52.9
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 2.8e-29 132.9 166 48.8
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 6.3e-29 131.7 141 53.2
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 5.0e-26 122.1 105 55.2
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 2.5e-25 119.8 106 53.8
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 1.0e-23 114.4 101 51.5
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 5.7e-22 108.6 144 47.2
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 7.2e-17 91.7 72 59.7
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.4e-15 87.4 146 43.2
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 2.5e-09 66.6 107 53.3
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.0e-07 61.2 144 40.3


User provided reference genes

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