Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2619 Papaver somniferum HOM05D007022 ORTHO05D008868 1.3e-109 399.8 213 100.0
PSO675G2542 Papaver somniferum HOM05D007022 ORTHO05D008868 8.7e-106 387.1 213 94.4
Nn1g04883 Nelumbo nucifera HOM05D007022 ORTHO05D008868 2.1e-51 206.5 216 55.1
TAR381G0954 Trochodendron aralioides HOM05D007022 ORTHO05D008868 7.5e-49 198.0 217 57.1
Aqoxy6G01341 Aquilegia oxysepala HOM05D007022 ORTHO05D008868 9.7e-49 197.6 217 53.0
Rhsim11G0166300 Rhododendron simsii HOM05D007022 ORTHO05D008868 1.3e-48 197.2 214 54.7
MBI06_g36648_MAGBIO Magnolia biondii HOM05D007022 ORTHO05D008868 1.1e-47 194.1 214 52.8
Dinv23619 Davidia involucrata HOM05D007022 ORTHO05D008868 3.1e-47 192.6 215 53.5
Lsat_1_v5_gn_9_110080 Lactuca sativa HOM05D007022 ORTHO05D008868 4.1e-47 192.2 119 81.5
Peaxi162Scf00016g01823 Petunia axillaris HOM05D007022 ORTHO05D008868 5.3e-47 191.8 119 83.2
CSS0015269 Camellia sinensis var. sinensis HOM05D007022 ORTHO05D008868 7.0e-47 191.4 222 56.3
Cpa.g.sc62.15 Carica papaya HOM05D007022 ORTHO05D008868 1.6e-46 190.3 208 52.9
Nn5g30258 Nelumbo nucifera HOM05D007022 ORTHO05D008868 3.5e-46 189.1 212 52.8
SalBow6G3975 Salvia bowleyana HOM05D007022 ORTHO05D008868 5.9e-46 188.3 211 51.7
vmacro02203 Vaccinium macrocarpon HOM05D007022 ORTHO05D008868 5.9e-46 188.3 211 52.6
HanXRQChr09g0251721 Helianthus annuus HOM05D007022 ORTHO05D008868 2.2e-45 186.4 114 84.2
Prupe.8G124000 Prunus persica HOM05D007022 ORTHO05D008868 2.9e-45 186.0 212 58.0
GSVIVG01031751001 Vitis vinifera HOM05D007022 ORTHO05D008868 2.9e-45 186.0 208 50.5
Actinidia12953 Actinidia chinensis HOM05D007022 ORTHO05D008868 3.8e-45 185.7 215 51.2
ECA240G1411 Erigeron canadensis HOM05D007022 ORTHO05D008868 3.8e-45 185.7 116 81.0
CDE04G2473 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 5.0e-45 185.3 116 76.7
MD10G1094200 Malus domestica HOM05D007022 ORTHO05D008868 1.1e-44 184.1 117 82.9
Manes.07G082700 Manihot esculenta HOM05D007022 ORTHO05D008868 2.5e-44 183.0 211 50.7
Hma1.2p1_0370F.1_g137830 Hydrangea macrophylla HOM05D007022 ORTHO05D008868 5.5e-44 181.8 213 53.1
Potri.009G102400 Populus trichocarpa HOM05D007022 ORTHO05D008868 7.2e-44 181.4 121 69.4
PGR042G2146 Punica granatum HOM05D007022 ORTHO05D008868 7.2e-44 181.4 119 71.4
Oeu007283.1 Olea europaea HOM05D007022 ORTHO05D008868 1.6e-43 180.3 210 50.0
MELO3C019509.2 Cucumis melo HOM05D007022 ORTHO05D008868 2.1e-43 179.9 117 80.3
TWI75G1380 Tripterygium wilfordii HOM05D007022 ORTHO05D008868 2.7e-43 179.5 201 56.2
unitig_26.g10239 Utricularia gibba HOM05D007022 ORTHO05D008868 3.6e-43 179.1 117 69.2
QL11p035981 Quercus lobata HOM05D007022 ORTHO05D008868 4.7e-43 178.7 212 49.5
Sed0002892 Sechium edule HOM05D007022 ORTHO05D008868 4.7e-43 178.7 117 79.5
MSTRG.27723 Avicennia marina HOM05D007022 ORTHO05D008868 6.1e-43 178.3 113 72.6
CsaV3_3G018570 Cucumis sativus L. HOM05D007022 ORTHO05D008868 6.1e-43 178.3 117 79.5
Nitab4.5_0002543g0040 Nicotiana tabacum HOM05D007022 ORTHO05D008868 6.1e-43 178.3 216 50.0
Solyc01g108200.3 Solanum lycopersicum HOM05D007022 ORTHO05D008868 8.0e-43 177.9 118 72.9
Sopen01g050430 Solanum pennellii HOM05D007022 ORTHO05D008868 8.0e-43 177.9 118 72.9
Ciclev10029362m.g Citrus clementina HOM05D007022 ORTHO05D008868 1.8e-42 176.8 117 70.9
Cc02_g18740 Coffea canephora HOM05D007022 ORTHO05D008868 1.8e-42 176.8 114 70.2
Migut.B00344 Erythranthe guttata HOM05D007022 ORTHO05D008868 1.8e-42 176.8 174 54.0
Thecc.02G100400 Theobroma cacao HOM05D007022 ORTHO05D008868 3.0e-42 176.0 111 72.1
Nitab4.5_0007480g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 4.0e-42 175.6 114 72.8
BcaB06g25978 Brassica carinata HOM05D007022 ORTHO05D008868 5.2e-42 175.3 108 75.0
ClCG05G010000 Citrullus lanatus HOM05D007022 ORTHO05D008868 5.2e-42 175.3 117 77.8
Atru.chr5.2709 Acer truncatum HOM05D007022 ORTHO05D008868 8.8e-42 174.5 119 74.8
Dinv42154 Davidia involucrata HOM05D007022 ORTHO05D008868 1.2e-41 174.1 203 51.2
CANSAT25G3754 Cannabis sativa HOM05D007022 ORTHO05D008868 2.0e-41 173.3 113 78.8
Thhalv10021599m.g Eutrema salsugineum HOM05D007022 ORTHO05D008868 2.0e-41 173.3 107 73.8
Gohir.A13G040100 Gossypium hirsutum HOM05D007022 ORTHO05D008868 2.6e-41 172.9 111 71.2
Gohir.D13G038800 Gossypium hirsutum HOM05D007022 ORTHO05D008868 2.6e-41 172.9 111 71.2
Gorai.013G043500 Gossypium raimondii HOM05D007022 ORTHO05D008868 2.6e-41 172.9 111 71.2
CiPaw.06G172800 Carya illinoinensis HOM05D007022 ORTHO05D008868 3.4e-41 172.6 121 67.8
RcHm_v2.0_Chr6g0257061 Rosa chinensis HOM05D007022 ORTHO05D008868 4.4e-41 172.2 213 50.7
Aa31LG8G6010 Aethionema arabicum HOM05D007022 ORTHO05D008868 5.7e-41 171.8 107 73.8
Hund00236 Selenicereus undatus HOM05D007022 ORTHO05D008868 5.7e-41 171.8 212 52.8
FvH4_2g06130 Fragaria vesca HOM05D007022 ORTHO05D008868 9.8e-41 171.0 118 73.7
Haze_10076 Corylus avellana HOM05D007022 ORTHO05D008868 1.3e-40 170.6 219 46.6
COL.COLO4_32660 Corchorus olitorius HOM05D007022 ORTHO05D003154 1.7e-40 170.2 111 67.6
AL3G32600 Arabidopsis lyrata HOM05D007022 ORTHO05D008868 2.2e-40 169.9 107 73.8
AT3G19220 Arabidopsis thaliana HOM05D007022 ORTHO05D008868 2.2e-40 169.9 107 73.8
SGA_v2.0_scaffold13G06591 Striga asiatica HOM05D007022 ORTHO05D008868 2.2e-40 169.9 117 65.8
Sp3g17290 Schrenkiella parvula HOM05D007022 ORTHO05D008868 3.7e-40 169.1 107 72.9
arahy.Tifrunner.gnm1.ann1.059Z6S Arachis hypogaea HOM05D007022 ORTHO05D008868 6.3e-40 168.3 111 80.2
Ca_18680_v3 Cicer arietinum L. HOM05D007022 ORTHO05D008868 6.3e-40 168.3 117 75.2
BcaC05g28522 Brassica carinata HOM05D007022 ORTHO05D008868 8.3e-40 167.9 107 72.9
A05p30420 Brassica napus HOM05D007022 ORTHO05D008868 8.3e-40 167.9 107 72.9
BolC5t33329H Brassica oleracea HOM05D007022 ORTHO05D008868 8.3e-40 167.9 107 72.9
BraA05t21880Z Brassica rapa HOM05D007022 ORTHO05D008868 8.3e-40 167.9 107 72.9
Phvul.003G292600 Phaseolus vulgaris HOM05D007022 ORTHO05D008868 8.3e-40 167.9 165 59.4
TPR.G28492 Trifolium pratense HOM05D007022 ORTHO05D008868 2.4e-39 166.4 118 74.6
Glyma.07G212100 Glycine max HOM05D007022 ORTHO05D008868 7.0e-39 164.9 165 59.4
Carub.0003s1905 Capsella rubella HOM05D007022 ORTHO05D008868 9.1e-39 164.5 107 71.0
Psat7g125000 Pisum sativum HOM05D007022 ORTHO05D008868 9.1e-39 164.5 117 74.4
Lalb_Chr16g0384701 Lupinus albus HOM05D007022 ORTHO05D008868 3.5e-38 162.5 204 51.5
THA.LOC104798819 Tarenaya hassleriana HOM05D007022 ORTHO05D008868 4.5e-38 162.2 94 79.8
Glyma.02G132900 Glycine max HOM05D007022 ORTHO05D008868 1.3e-37 160.6 195 52.8
Lj9A358T46 Lonicera japonica HOM05D007022 ORTHO05D008868 1.7e-37 160.2 149 55.7
Sc08g0000700 Simmondsia chinensis HOM05D005091 ORTHO05D006047 5.0e-37 158.7 136 59.6
Lj4g0019449 Lotus japonicus HOM05D007022 ORTHO05D008868 1.9e-36 156.8 188 50.5
Actinidia00443 Actinidia chinensis HOM05D007022 ORTHO05D008868 2.5e-36 156.4 183 49.7
PGSC0003DMG401025892 Solanum tuberosum HOM05D007022 ORTHO05D008868 2.5e-36 156.4 88 80.7
HPP92_016383 Vanilla planifolia HOM05D002198 ORTHO05D008868 4.2e-36 155.6 210 43.3
VMungo0251G0366 Vigna mungo HOM05D007022 ORTHO05D008868 4.2e-36 155.6 124 60.5
Sopen10g021420 Solanum pennellii HOM05D007022 ORTHO05D008868 3.6e-35 152.5 100 71.0
Ah.01g019040 Amaranthus hybridus HOM05D007022 ORTHO05D008868 8.0e-35 151.4 204 48.0
arahy.Tifrunner.gnm1.ann1.WB2CJ6 Arachis hypogaea HOM05D007022 ORTHO05D008868 1.8e-34 150.2 87 79.3
Oeu013707.1 Olea europaea HOM05D007022 ORTHO05D008868 1.2e-33 147.5 145 54.5
ATR0100G054 Amborella trichopoda HOM05D007022 ORTHO05D008868 2.6e-33 146.4 86 73.3
FAN15G0654 Fragaria x ananassa HOM05D007022 ORTHO05D008868 7.5e-33 144.8 156 48.7
FAN20G2768 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.3e-32 144.1 88 71.6
FAN24G2553 Fragaria x ananassa HOM05D007022 ORTHO05D008868 1.3e-32 144.1 88 71.6
Zm00001eb100830 Zea mays HOM05D007022 ORTHO05D008868 4.9e-32 142.1 110 56.4
AUR62016784 Chenopodium quinoa HOM05D007022 ORTHO05D008868 2.4e-31 139.8 106 69.8
EL10Ac9g21683 Beta vulgaris HOM05D007022 ORTHO05D008868 9.2e-31 137.9 180 43.9
Medtr4g086255 Medicago truncatula HOM05D007022 ORTHO05D008868 1.6e-30 137.1 83 75.9
Nitab4.5_0005758g0030 Nicotiana tabacum HOM05D007022 ORTHO05D008868 2.7e-30 136.3 76 81.6
Nitab4.5_0012979g0010 Nicotiana tabacum HOM05D007022 ORTHO05D008868 7.7e-30 134.8 76 80.3
CDE03G0325 Ceratophyllum demersum HOM05D007022 ORTHO05D008868 2.1e-27 126.7 78 75.6
Os09g0458400 Oryza sativa ssp. japonica HOM05D007022 ORTHO05D008868 1.4e-26 124.0 79 68.4
CBR_g29933 Chara braunii HOM05D007022 ORTHO05D008868 4.1e-23 112.5 94 56.4
AagrBONN_evm.TU.Sc2ySwM_368.1030 Anthoceros agrestis HOM05D007022 ORTHO05D008868 2.3e-21 106.7 111 42.3
Sabra09G0078400 Salix brachista HOM05D007022 ORTHO05D008868 8.6e-21 104.8 169 40.2
Sopen10g021450 Solanum pennellii HOM05D007022 ORTHO05D008868 1.5e-20 104.0 68 69.1
Pp3c1_42880 Physcomitrium patens HOM05D007022 ORTHO05D008868 5.6e-20 102.1 104 48.1
SMO232G0067 Selaginella moellendorffii HOM05D007022 ORTHO05D008868 9.5e-20 101.3 77 57.1
Pp3c2_400 Physcomitrium patens HOM05D007022 ORTHO05D008868 3.1e-18 96.3 104 44.2
SEGI_10031 Sequoiadendron giganteum HOM05D007022 ORTHO05D008868 2.0e-17 93.6 70 71.4
Mapoly0186s0009 Marchantia polymorpha HOM05D007022 ORTHO05D008868 5.8e-17 92.0 109 45.0
Rhsim11G0166200 Rhododendron simsii HOM05D007022 ORTHO05D008868 8.3e-16 88.2 72 62.5
Cfa004517 Carpinus fangiana HOM05D007022 ORTHO05D008868 4.1e-15 85.9 124 42.7
DCAR_022028 Daucus carota HOM05D007022 ORTHO05D008868 9.2e-15 84.7 148 41.2
ECA240G0576 Erigeron canadensis HOM05D007022 ORTHO05D008868 1.0e-13 81.3 47 76.6
CARHR094630 Cardamine hirsuta HOM05D007022 ORTHO05D008868 6.6e-13 78.6 44 77.3
PGSC0003DMG400006210 Solanum tuberosum HOM05D007022 ORTHO05D008868 1.5e-12 77.4 68 55.9


User provided reference genes

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