Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2605 Papaver somniferum HOM05D002134 ORTHO05D008658 0.0e+00 1337.4 856 100.0
PSO675G8956 Papaver somniferum HOM05D002134 ORTHO05D008658 0.0e+00 1186.4 860 89.1
TAR376G0546 Trochodendron aralioides HOM05D002134 ORTHO05D008658 1.8e-133 481.1 873 45.5
Dinv36064 Davidia involucrata HOM05D002134 ORTHO05D008658 9.8e-116 422.2 872 41.6
GSVIVG01009687001 Vitis vinifera HOM05D002134 ORTHO05D008658 2.2e-115 421.0 872 41.5
Nn5g29542 Nelumbo nucifera HOM05D002134 ORTHO05D008658 4.8e-115 419.9 888 41.4
Aqoxy6G01051 Aquilegia oxysepala HOM05D002134 ORTHO05D008658 8.3e-115 419.1 599 49.4
CSS0008789 Camellia sinensis var. sinensis HOM05D002134 ORTHO05D008658 2.0e-108 397.9 630 45.9
Actinidia38014 Actinidia chinensis HOM05D002134 ORTHO05D008658 4.4e-108 396.7 709 44.9
MBI16_g17456_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.3e-107 395.2 873 39.1
QL02p007944 Quercus lobata HOM05D002134 ORTHO05D008658 1.1e-106 392.1 721 44.4
CiPaw.15G075800 Carya illinoinensis HOM05D002134 ORTHO05D008658 5.9e-105 386.3 685 42.8
Cfa018138 Carpinus fangiana HOM05D002134 ORTHO05D008658 7.3e-103 379.4 890 38.8
Manes.05G161600 Manihot esculenta HOM05D002134 ORTHO05D008658 1.4e-101 375.2 626 41.5
Haze_17986 Corylus avellana HOM05D002134 ORTHO05D008658 2.4e-98 364.4 938 39.0
Atru.chr8.2604 Acer truncatum HOM05D002134 ORTHO05D008658 4.1e-98 363.6 853 36.1
Eucgr.F01907 Eucalyptus grandis HOM05D002134 ORTHO05D008658 5.4e-98 363.2 675 40.9
TWI12G0094 Tripterygium wilfordii HOM05D002134 ORTHO05D008658 1.2e-97 362.1 857 40.0
vmacro04518 Vaccinium macrocarpon HOM05D002134 ORTHO05D008658 2.0e-97 361.3 713 40.4
Atru.chr13.512 Acer truncatum HOM05D002134 ORTHO05D008658 6.0e-97 359.8 851 36.7
Rhsim07G0237200 Rhododendron simsii HOM05D002134 ORTHO05D008658 1.6e-94 351.7 630 41.9
DCAR_008767 Daucus carota HOM05D002134 ORTHO05D008658 2.6e-92 344.4 689 41.2
ECA247G2410 Erigeron canadensis HOM05D002134 ORTHO05D008658 1.1e-90 339.0 706 39.2
Nitab4.5_0000523g0050 Nicotiana tabacum HOM05D002134 ORTHO05D008658 1.4e-90 338.6 654 40.7
Duzib116G0898 Durio zibethinus HOM05D002134 ORTHO05D008658 2.4e-90 337.8 660 41.8
Nitab4.5_0006995g0020 Nicotiana tabacum HOM05D002134 ORTHO05D008658 5.4e-90 336.7 649 40.7
Sabra02G0199600 Salix brachista HOM05D002134 ORTHO05D008658 9.2e-90 335.9 631 41.5
Potri.002G262800 Populus trichocarpa HOM05D002134 ORTHO05D008658 2.0e-89 334.7 664 40.7
Ciclev10000375m.g Citrus clementina HOM05D002134 ORTHO05D008658 1.0e-88 332.4 603 41.0
Cc10_g03060 Coffea canephora HOM05D002134 ORTHO05D008658 1.7e-88 331.6 614 41.9
Medtr3g111740 Medicago truncatula HOM05D002134 ORTHO05D008658 5.0e-88 330.1 701 41.1
HanXRQChr04g0105601 Helianthus annuus HOM05D002134 ORTHO05D008658 6.6e-88 329.7 635 42.8
Peaxi162Scf00925g00033 Petunia axillaris HOM05D002134 ORTHO05D008658 6.6e-88 329.7 579 42.5
Lsat_1_v5_gn_1_17581 Lactuca sativa HOM05D002134 ORTHO05D008658 1.2e-86 325.5 632 45.4
ATR0733G232 Amborella trichopoda HOM05D002134 ORTHO05D008658 1.6e-86 325.1 616 43.5
CANSAT25G1781 Cannabis sativa HOM05D002134 ORTHO05D008658 2.1e-86 324.7 622 40.0
Ca_15521_v3 Cicer arietinum L. HOM05D002134 ORTHO05D008658 2.8e-86 324.3 707 40.2
Prupe.1G381400 Prunus persica HOM05D002134 ORTHO05D008658 3.6e-86 323.9 916 41.6
Thecc.08G024500 Theobroma cacao HOM05D002134 ORTHO05D008658 6.2e-86 323.2 662 40.6
Lj1g0006718 Lotus japonicus HOM05D002134 ORTHO05D008658 2.0e-84 318.2 675 38.7
MD08G1033500 Malus domestica HOM05D002134 ORTHO05D008658 4.4e-84 317.0 830 40.2
Lalb_Chr23g0266641 Lupinus albus HOM05D002134 ORTHO05D008658 1.3e-83 315.5 676 39.8
PGR031G3893 Punica granatum HOM05D002134 ORTHO05D008658 3.7e-83 313.9 620 42.1
MD15G1030200 Malus domestica HOM05D002134 ORTHO05D008658 1.1e-82 312.4 890 38.8
Psat0s2660g0080 Pisum sativum HOM05D002134 ORTHO05D008658 1.2e-81 308.9 611 43.5
Gohir.D01G104800 Gossypium hirsutum HOM05D002134 ORTHO05D008658 5.1e-80 303.5 667 39.9
Sopen07g013310 Solanum pennellii HOM05D002134 ORTHO05D008658 6.6e-80 303.1 602 42.5
Glyma.04G033100 Glycine max HOM05D002134 ORTHO05D008658 8.6e-80 302.8 622 40.8
Phvul.009G057000 Phaseolus vulgaris HOM05D002134 ORTHO05D008658 8.6e-80 302.8 607 40.2
Gohir.A01G116400 Gossypium hirsutum HOM05D002134 ORTHO05D008658 3.3e-79 300.8 672 38.8
Solyc07g025380.3 Solanum lycopersicum HOM05D002134 ORTHO05D008658 3.3e-79 300.8 602 43.4
Glyma.06G033100 Glycine max HOM05D002134 ORTHO05D008658 4.3e-79 300.4 693 38.4
Gorai.002G128800 Gossypium raimondii HOM05D002134 ORTHO05D008658 4.3e-79 300.4 667 39.9
FvH4_2g39970 Fragaria vesca HOM05D002134 ORTHO05D008658 4.7e-78 297.0 596 40.9
TPR.G12392 Trifolium pratense HOM05D002134 ORTHO05D008658 1.4e-77 295.4 629 41.2
CsaV3_3G045010 Cucumis sativus L. HOM05D002134 ORTHO05D008658 3.1e-77 294.3 673 38.2
ClCG05G019130 Citrullus lanatus HOM05D002134 ORTHO05D008658 8.9e-77 292.7 728 37.5
MELO3C003852.2 Cucumis melo HOM05D002134 ORTHO05D008658 2.0e-76 291.6 739 36.5
CAN.G52.14 Capsicum annuum HOM05D002134 ORTHO05D008658 4.4e-76 290.4 598 39.6
Lj4A785T29 Lonicera japonica HOM05D002134 ORTHO05D008658 5.8e-76 290.0 570 41.9
SGA_v2.0_scaffold48G18075 Striga asiatica HOM05D002134 ORTHO05D008658 7.6e-76 289.7 881 33.5
Sed0018102 Sechium edule HOM05D002134 ORTHO05D008658 2.2e-75 288.1 690 37.1
arahy.Tifrunner.gnm1.ann1.20CGAG Arachis hypogaea HOM05D002134 ORTHO05D008658 2.9e-75 287.7 631 39.9
SalBow7G3154 Salvia bowleyana HOM05D002134 ORTHO05D008658 1.9e-74 285.0 625 37.8
RcHm_v2.0_Chr6g0300781 Rosa chinensis HOM05D002134 ORTHO05D008658 2.4e-74 284.6 569 41.3
PGSC0003DMG400007581 Solanum tuberosum HOM05D002134 ORTHO05D008658 3.2e-74 284.3 631 40.7
VMungo1309G2241 Vigna mungo HOM05D006576 ORTHO05D008644 1.2e-73 282.3 588 41.7
Duzib093G1270 Durio zibethinus HOM05D002134 ORTHO05D008658 3.5e-73 280.8 670 36.3
Migut.C00708 Erythranthe guttata HOM05D002134 ORTHO05D008658 1.0e-72 279.3 716 36.9
FAN27G2069 Fragaria x ananassa HOM05D002134 ORTHO05D008658 2.4e-69 268.1 857 36.2
MBI16_g45959_MAGBIO Magnolia biondii HOM05D002134 ORTHO05D008658 1.2e-68 265.8 837 34.3
arahy.Tifrunner.gnm1.ann1.6UHH7V Arachis hypogaea HOM05D002134 ORTHO05D008658 4.2e-66 257.3 744 37.5
THA.LOC104813840 Tarenaya hassleriana HOM05D002134 ORTHO05D008658 1.2e-65 255.8 640 36.7
Hund27548 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.7e-64 251.9 599 38.9
Hund27550 Selenicereus undatus HOM05D002134 ORTHO05D008658 1.7e-64 251.9 599 38.9
Lalb_Chr08g0245851 Lupinus albus HOM05D002134 ORTHO05D008658 2.3e-64 251.5 419 44.9
FAN20G2431 Fragaria x ananassa HOM05D002134 ORTHO05D003893 6.9e-61 240.0 593 38.4
Zm00001eb061990 Zea mays HOM05D002134 ORTHO05D008658 6.9e-61 240.0 633 37.0
FAN15G0789 Fragaria x ananassa HOM05D002134 ORTHO05D003893 2.1e-57 228.4 835 35.7
AL2G35050 Arabidopsis lyrata HOM05D002134 ORTHO05D008658 3.0e-56 224.6 682 35.5
A07p40750 Brassica napus HOM05D002134 ORTHO05D008658 7.4e-55 219.9 669 35.6
Hma1.2p1_0203F.1_g086500 Hydrangea macrophylla HOM05D002134 ORTHO05D008658 3.7e-54 217.6 318 46.9
CDE02G0502 Ceratophyllum demersum HOM05D002134 ORTHO05D008658 1.4e-53 215.7 648 32.4
EL10Ac1g01833 Beta vulgaris HOM05D002134 ORTHO05D008658 3.1e-53 214.5 685 32.4
unitig_37.g12967 Utricularia gibba HOM05D002134 ORTHO05D008658 5.3e-53 213.8 603 35.2
Aa31LG4G5340 Aethionema arabicum HOM05D002134 ORTHO05D008658 1.2e-52 212.6 704 32.8
Carub.0002s2196 Capsella rubella HOM05D002134 ORTHO05D008658 2.0e-52 211.8 677 36.2
CARHR068480 Cardamine hirsuta HOM05D002134 ORTHO05D008658 7.6e-52 209.9 718 33.8
Sed0020001 Sechium edule HOM05D002134 ORTHO05D008658 7.6e-52 209.9 573 34.4
BraA07t31617Z Brassica rapa HOM05D002134 ORTHO05D008658 9.9e-52 209.5 677 35.6
Thhalv10019843m.g Eutrema salsugineum HOM05D002134 ORTHO05D008658 1.3e-51 209.1 662 33.5
Sp5g30280 Schrenkiella parvula HOM05D002134 ORTHO05D008658 2.9e-51 208.0 687 34.8
AT1G75150 Arabidopsis thaliana HOM05D002134 ORTHO05D008658 4.2e-50 204.1 667 35.8
SEGI_00628 Sequoiadendron giganteum HOM05D002134 ORTHO05D008658 1.6e-49 202.2 636 31.1
BcaC08g46941 Brassica carinata HOM05D000061 ORTHO05D008658 2.1e-49 201.8 643 36.1
C06p49130 Brassica napus HOM05D002134 ORTHO05D008658 2.3e-48 198.4 676 36.1
BolC6t39947H Brassica oleracea HOM05D002134 ORTHO05D008658 2.3e-48 198.4 676 36.1
BcaC08g46976 Brassica carinata HOM05D002134 ORTHO05D008658 1.9e-47 195.3 639 35.7
Sc02g0006290 Simmondsia chinensis HOM05D002134 ORTHO05D008658 9.6e-47 193.0 552 36.2
Ah.11g043170 Amaranthus hybridus HOM05D002134 ORTHO05D008658 1.4e-42 179.1 608 32.9
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 2.5e-39 168.3 510 31.2
AUR62034948 Chenopodium quinoa HOM05D002134 ORTHO05D008658 6.9e-37 160.2 628 28.5
SHI17315 Sapria himalayana HOM05D002134 ORTHO05D008658 8.5e-35 153.3 226 48.2
HPP92_018472 Vanilla planifolia HOM05D002134 ORTHO05D008658 1.4e-29 136.0 467 30.8
AUR62035457 Chenopodium quinoa HOM05D002134 ORTHO05D008658 4.1e-29 134.4 643 27.2
Cpa.g.sc64.73 Carica papaya HOM05D002134 ORTHO05D008658 7.9e-25 120.2 210 44.8
Cpa.g.sc64.74 Carica papaya HOM05D002134 ORTHO05D008658 1.8e-24 119.0 432 33.1
Mapoly0032s0034 Marchantia polymorpha HOM05D002134 ORTHO05D008658 3.9e-24 117.9 649 29.0
Pp3c7_550 Physcomitrium patens HOM05D002134 ORTHO05D008658 3.9e-24 117.9 646 26.6
Pp3c7_551 Physcomitrium patens HOM05D002134 ORTHO05D008658 3.9e-24 117.9 646 26.6
SMO144G0024 Selaginella moellendorffii HOM05D002134 ORTHO05D008658 2.0e-23 115.5 547 27.8
HPP92_018471 Vanilla planifolia HOM05D002134 ORTHO05D008658 4.1e-21 107.8 176 45.5
Oeu036193.1 Olea europaea HOM05D002134 ORTHO05D008658 3.2e-18 98.2 274 33.6
Actinidia29830 Actinidia chinensis HOM05D002134 ORTHO05D008658 3.6e-17 94.7 149 46.3
DCAR_011210 Daucus carota HOM05D001893 ORTHO05D008658 5.9e-12 77.4 144 45.8
Peaxi162Scf00162g00213 Petunia axillaris HOM05D000561 ORTHO05D000514 3.6e-09 68.2 113 44.2


User provided reference genes

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