Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2474 Papaver somniferum HOM05D007498 ORTHO05D009384 2.2e-214 748.8 408 100.0
PSO675G1300 Papaver somniferum HOM05D007498 ORTHO05D009384 6.3e-206 720.7 437 91.8
TAR629G3061 Trochodendron aralioides HOM05D007498 ORTHO05D009384 1.4e-141 506.9 381 67.5
Dinv08726 Davidia involucrata HOM05D007498 ORTHO05D009384 7.1e-133 478.0 381 63.5
CSS0038240 Camellia sinensis var. sinensis HOM05D007498 ORTHO05D009384 1.6e-132 476.9 382 63.4
Aqoxy1G04193 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 2.4e-128 463.0 370 64.1
Actinidia13735 Actinidia chinensis HOM05D007498 ORTHO05D009384 6.5e-126 454.9 380 61.6
GSVIVG01030496001 Vitis vinifera HOM05D007498 ORTHO05D009384 1.9e-125 453.4 374 63.1
MBI19_g41387_MAGBIO Magnolia biondii HOM05D007498 ORTHO05D009384 7.2e-125 451.4 385 60.8
Actinidia09741 Actinidia chinensis HOM05D007498 ORTHO05D009384 1.2e-124 450.7 380 62.1
Hma1.2p1_2381F.1_g320980 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 3.6e-124 449.1 398 57.5
Hma1.2p1_0445F.1_g154420 Hydrangea macrophylla HOM05D007498 ORTHO05D009384 6.1e-124 448.4 398 57.3
Nn1g03383 Nelumbo nucifera HOM05D007498 ORTHO05D009384 5.7e-122 441.8 380 61.6
Rhsim09G0054300 Rhododendron simsii HOM05D007498 ORTHO05D009384 5.7e-122 441.8 430 56.5
Rhsim06G0166900 Rhododendron simsii HOM05D007498 ORTHO05D009384 2.2e-121 439.9 430 56.3
QL08p030918 Quercus lobata HOM05D007498 ORTHO05D009384 3.7e-121 439.1 385 60.8
Sopen05g026100 Solanum pennellii HOM05D007498 ORTHO05D009384 2.6e-119 433.0 374 58.3
CiPaw.03G155900 Carya illinoinensis HOM05D007498 ORTHO05D009384 7.7e-119 431.4 384 60.4
MD17G1103400 Malus domestica HOM05D007498 ORTHO05D009384 1.3e-118 430.6 407 58.5
CANSAT64G1398 Cannabis sativa HOM05D007498 ORTHO05D009384 2.2e-118 429.9 387 59.2
vmacro12166 Vaccinium macrocarpon HOM05D007498 ORTHO05D009384 5.0e-118 428.7 460 52.6
Nitab4.5_0006063g0010 Nicotiana tabacum HOM05D007498 ORTHO05D009384 8.5e-118 427.9 387 59.2
Solyc05g042050.4 Solanum lycopersicum HOM05D007498 ORTHO05D009384 1.4e-117 427.2 374 57.5
TWI18G0826 Tripterygium wilfordii HOM05D007498 ORTHO05D009384 1.9e-117 426.8 384 59.1
Lj1A780G53 Lonicera japonica HOM05D007498 ORTHO05D009384 2.5e-117 426.4 380 58.4
Sc21g0001170 Simmondsia chinensis HOM05D007498 ORTHO05D009384 5.5e-117 425.2 377 58.6
Cc05_g03070 Coffea canephora HOM05D007498 ORTHO05D009384 9.4e-117 424.5 366 57.4
Nitab4.5_0000019g0370 Nicotiana tabacum HOM05D007498 ORTHO05D009384 2.7e-116 422.9 373 60.1
Ciclev10015493m.g Citrus clementina HOM05D007498 ORTHO05D009384 1.0e-115 421.0 364 62.9
Prupe.3G211200 Prunus persica HOM05D007498 ORTHO05D009384 1.4e-115 420.6 383 58.2
PGR042G1731 Punica granatum HOM05D007498 ORTHO05D009384 9.7e-114 414.5 360 60.8
Manes.12G070200 Manihot esculenta HOM05D007498 ORTHO05D009384 1.3e-113 414.1 363 60.1
Thecc.01G181300 Theobroma cacao HOM05D007498 ORTHO05D009384 1.7e-113 413.7 387 55.8
Gorai.001G216600 Gossypium raimondii HOM05D007498 ORTHO05D009384 2.2e-113 413.3 363 59.0
Eucgr.A01096 Eucalyptus grandis HOM05D007498 ORTHO05D009384 4.1e-112 409.1 358 59.5
Medtr3g080260 Medicago truncatula HOM05D007498 ORTHO05D009384 5.3e-112 408.7 362 58.0
Sp3g24210 Schrenkiella parvula HOM05D007498 ORTHO05D009384 5.3e-112 408.7 366 61.2
COL.COLO4_21864 Corchorus olitorius HOM05D007498 ORTHO05D009384 9.1e-112 407.9 385 56.4
TPR.G34497 Trifolium pratense HOM05D007498 ORTHO05D009384 2.0e-111 406.8 371 57.4
Phvul.006G012811 Phaseolus vulgaris HOM05D007498 ORTHO05D009384 4.5e-111 405.6 388 57.0
AT2G05755 Arabidopsis thaliana HOM05D007498 ORTHO05D009384 1.0e-110 404.4 377 58.9
Aa31LG8G11370 Aethionema arabicum HOM05D007498 ORTHO05D009384 1.3e-110 404.1 375 60.3
CARHR103340 Cardamine hirsuta HOM05D007498 ORTHO05D009384 1.7e-110 403.7 378 57.4
Peaxi162Scf00100g01524 Petunia axillaris HOM05D007498 ORTHO05D009384 1.7e-110 403.7 385 55.6
AL3G43270 Arabidopsis lyrata HOM05D007498 ORTHO05D009384 2.2e-110 403.3 366 59.3
RcHm_v2.0_Chr2g0158311 Rosa chinensis HOM05D007498 ORTHO05D009384 2.2e-110 403.3 363 57.3
Gohir.A07G187000 Gossypium hirsutum HOM05D007498 ORTHO05D009384 3.8e-110 402.5 363 58.4
Carub.0003s2696 Capsella rubella HOM05D007498 ORTHO05D009384 1.1e-109 401.0 367 58.9
FAN05G5059 Fragaria x ananassa HOM05D007498 ORTHO05D009384 3.2e-109 399.4 363 56.7
Sabra14G0119400 Salix brachista HOM05D007498 ORTHO05D009384 3.2e-109 399.4 380 57.9
HanXRQChr12g0373631 Helianthus annuus HOM05D007498 ORTHO05D009384 4.2e-109 399.1 380 55.3
C03p55520 Brassica napus HOM05D007498 ORTHO05D009384 2.7e-108 396.4 372 59.4
BcaC01g03153 Brassica carinata HOM05D007498 ORTHO05D009384 3.6e-108 396.0 372 59.7
FvH4_6g42420 Fragaria vesca HOM05D007498 ORTHO05D009384 3.6e-108 396.0 377 55.4
A03p44690 Brassica napus HOM05D007498 ORTHO05D009384 6.7e-107 391.7 368 59.0
Lj6g0022389 Lotus japonicus HOM05D007498 ORTHO05D009384 6.7e-107 391.7 364 57.1
BcaB08g34508 Brassica carinata HOM05D007498 ORTHO05D009384 2.6e-106 389.8 368 59.0
Lsat_1_v5_gn_5_123880 Lactuca sativa HOM05D007498 ORTHO05D009384 7.4e-106 388.3 379 54.6
BolC3t17828H Brassica oleracea HOM05D000228 ORTHO05D001122 1.7e-105 387.1 385 56.9
BraA03t13603Z Brassica rapa HOM05D007498 ORTHO05D009384 2.8e-105 386.3 381 57.0
THA.LOC104815344 Tarenaya hassleriana HOM05D007498 ORTHO05D009384 1.1e-104 384.4 391 53.7
ATR0059G023 Amborella trichopoda HOM05D007498 ORTHO05D009384 9.1e-104 381.3 376 53.5
Lsat_1_v5_gn_7_95281 Lactuca sativa HOM05D007498 ORTHO05D009384 1.3e-102 377.5 363 53.7
Sed0020195 Sechium edule HOM05D007498 ORTHO05D009384 1.5e-101 374.0 390 52.6
MD09G1113300 Malus domestica HOM05D007498 ORTHO05D009384 5.2e-99 365.5 335 57.3
Gohir.D07G193500 Gossypium hirsutum HOM05D007498 ORTHO05D009384 8.8e-99 364.8 314 60.8
CsaV3_6G037690 Cucumis sativus L. HOM05D007498 ORTHO05D009384 1.2e-98 364.4 389 51.9
Gorai.001G095600 Gossypium raimondii HOM05D007498 ORTHO05D009384 3.7e-97 359.4 387 50.9
Duzib138G1101 Durio zibethinus HOM05D007498 ORTHO05D009384 5.9e-87 325.5 387 49.4
MELO3C014431.2 Cucumis melo HOM05D007498 ORTHO05D009384 6.6e-86 322.0 424 45.3
Thhalv10002583m.g Eutrema salsugineum HOM05D007498 ORTHO05D009384 3.6e-84 316.2 369 53.1
ClCG07G002420 Citrullus lanatus HOM05D007498 ORTHO05D009384 4.9e-81 305.8 384 46.1
Aqoxy1G02942 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.6e-76 290.8 253 58.9
ECA234G3795 Erigeron canadensis HOM05D007498 ORTHO05D009384 3.4e-74 283.1 285 52.6
SEGI_23048 Sequoiadendron giganteum HOM05D007498 ORTHO05D009384 3.4e-74 283.1 375 42.4
Gohir.A07G083200 Gossypium hirsutum HOM05D007498 ORTHO05D009384 2.2e-73 280.4 280 53.9
Psat5g106880 Pisum sativum HOM05D007498 ORTHO05D009384 4.1e-72 276.2 248 56.5
Gohir.D07G089300 Gossypium hirsutum HOM05D007498 ORTHO05D009384 7.0e-72 275.4 281 53.4
FAN09G2551 Fragaria x ananassa HOM05D007498 ORTHO05D009384 2.3e-70 270.4 295 48.8
CDE07G0657 Ceratophyllum demersum HOM05D000323 ORTHO05D009384 3.9e-70 269.6 326 45.4
Ca_16281_v3 Cicer arietinum L. HOM05D007498 ORTHO05D009384 6.2e-68 262.3 365 44.9
Potri.014G157700 Populus trichocarpa HOM05D007498 ORTHO05D009384 4.3e-61 239.6 212 59.4
DCAR_019260 Daucus carota HOM05D007498 ORTHO05D001133 2.3e-54 217.2 169 62.1
AagrBONN_evm.TU.Sc2ySwM_344.4295 Anthoceros agrestis HOM05D007498 ORTHO05D009384 2.4e-51 207.2 346 35.0
FAN14G0249 Fragaria x ananassa HOM05D007498 ORTHO05D001133 6.4e-49 199.1 382 37.4
MD09G1113200 Malus domestica HOM05D007498 ORTHO05D009384 1.4e-48 198.0 242 48.3
Mapoly0005s0243 Marchantia polymorpha HOM05D007498 ORTHO05D009384 2.4e-48 197.2 297 37.4
Cpa.g.sc132.15 Carica papaya HOM05D007498 ORTHO05D009384 2.8e-44 183.7 143 66.4
Pp3c17_21590 Physcomitrium patens HOM05D007498 ORTHO05D009384 2.1e-39 167.5 294 32.7
SMO146G0054 Selaginella moellendorffii HOM05D007498 ORTHO05D009384 5.8e-34 149.4 306 33.3
Haze_12773 Corylus avellana HOM05D007498 ORTHO05D009384 4.6e-31 139.8 209 43.1
VMungo0540G0169 Vigna mungo HOM05D007498 ORTHO05D009384 5.3e-27 126.3 111 58.6
Aqoxy1G02941 Aquilegia oxysepala HOM05D007498 ORTHO05D009384 1.1e-24 118.6 96 64.6
Atru.chr6.3249 Acer truncatum HOM05D007498 ORTHO05D009384 1.8e-19 101.3 89 57.3
Atru.chr6.3248 Acer truncatum HOM05D007498 ORTHO05D009384 5.8e-18 96.3 71 66.2
VMungo0540G1885 Vigna mungo HOM05D007498 ORTHO05D009384 5.1e-14 83.2 67 64.2
Cfa025227 Carpinus fangiana HOM05D007498 ORTHO05D009384 5.3e-11 73.2 339 27.7
Cre07.g355550 Chlamydomonas reinhardtii HOM05D024201 ORTHO05D009384 5.1e-06 56.6 298 21.8


User provided reference genes

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