Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2462 Papaver somniferum HOM05D002846 ORTHO05D002692 6.6e-117 424.1 221 100.0
PSO675G7460 Papaver somniferum HOM05D002846 ORTHO05D002692 1.5e-108 396.4 221 93.2
Peaxi162Scf00932g00218 Petunia axillaris HOM05D002846 ORTHO05D002692 3.9e-16 89.4 208 38.5
Nitab4.5_0003509g0040 Nicotiana tabacum HOM05D002846 ORTHO05D002692 5.1e-16 89.0 212 36.8
GSVIVG01030606001 Vitis vinifera HOM05D002846 ORTHO05D002692 5.1e-16 89.0 211 36.5
Peaxi162Scf00462g00005 Petunia axillaris HOM05D002846 ORTHO05D002692 3.3e-15 86.3 221 36.7
TAR627G0783 Trochodendron aralioides HOM05D002846 ORTHO05D002692 6.2e-14 82.0 204 38.2
Peaxi162Scf00007g01016 Petunia axillaris HOM05D002846 ORTHO05D002692 1.4e-13 80.9 211 37.0
PGSC0003DMG400025494 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.8e-13 80.5 212 33.0
PGSC0003DMG400005270 Solanum tuberosum HOM05D002846 ORTHO05D002692 3.1e-13 79.7 213 36.2
TAR624G1330 Trochodendron aralioides HOM05D002846 ORTHO05D002692 5.2e-13 79.0 213 35.2
CAN.G1151.1 Capsicum annuum HOM05D002846 ORTHO05D002692 1.2e-12 77.8 238 34.5
Potri.011G135700 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.2e-12 77.8 218 33.0
Sabra14G0115500 Salix brachista HOM05D002846 ORTHO05D002692 1.2e-12 77.8 204 34.8
Ciclev10018295m.g Citrus clementina HOM05D002846 ORTHO05D002692 2.0e-12 77.0 204 37.7
TAR626G0168 Trochodendron aralioides HOM05D002846 ORTHO05D002692 2.6e-12 76.6 197 36.5
Glyma.06G303502 Glycine max HOM05D002846 ORTHO05D002692 3.4e-12 76.3 198 32.8
Sopen12g001770 Solanum pennellii HOM05D002846 ORTHO05D002692 3.4e-12 76.3 223 35.0
Glyma.12G100400 Glycine max HOM05D002846 ORTHO05D002692 4.4e-12 75.9 198 32.8
Psat5g264560 Pisum sativum HOM05D002846 ORTHO05D002692 4.4e-12 75.9 197 31.5
TPR.G4201 Trifolium pratense HOM05D002846 ORTHO05D002692 4.4e-12 75.9 197 35.5
CARHR097660 Cardamine hirsuta HOM05D002846 ORTHO05D002692 7.6e-12 75.1 203 35.5
Solyc12g005820.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 7.6e-12 75.1 223 33.6
Hma1.2p1_0948F.1_g240490 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 9.9e-12 74.7 206 34.0
QL08p033485 Quercus lobata HOM05D002846 ORTHO05D002692 2.2e-11 73.6 197 37.1
A03p42420 Brassica napus HOM05D002846 ORTHO05D002692 2.9e-11 73.2 202 36.6
BraA03t13394Z Brassica rapa HOM05D002846 ORTHO05D002692 2.9e-11 73.2 202 36.6
Nitab4.5_0001176g0060 Nicotiana tabacum HOM05D002846 ORTHO05D002692 2.9e-11 73.2 208 33.2
Potri.014G151900 Populus trichocarpa HOM05D002846 ORTHO05D002692 2.9e-11 73.2 207 33.3
BcaB04g20571 Brassica carinata HOM05D002846 ORTHO05D002692 4.9e-11 72.4 202 35.6
BcaC01g03489 Brassica carinata HOM05D002846 ORTHO05D002692 4.9e-11 72.4 200 34.5
C03p51900 Brassica napus HOM05D002846 ORTHO05D002692 4.9e-11 72.4 200 35.5
BolC3t17475H Brassica oleracea HOM05D002846 ORTHO05D002692 4.9e-11 72.4 200 34.5
BcaB04g19182 Brassica carinata HOM05D002846 ORTHO05D002692 6.4e-11 72.0 200 33.5
Nitab4.5_0015723g0010 Nicotiana tabacum HOM05D002846 ORTHO05D002692 6.4e-11 72.0 212 33.5
Cc05_g13390 Coffea canephora HOM05D002846 ORTHO05D002692 1.4e-10 70.9 226 30.5
FAN05G4571 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.9e-10 70.5 199 31.2
Lalb_Chr14g0367581 Lupinus albus HOM05D002846 ORTHO05D002692 1.9e-10 70.5 198 32.3
Lalb_Chr03g0028801 Lupinus albus HOM05D002846 ORTHO05D002692 2.4e-10 70.1 207 32.9
Dinv39698 Davidia involucrata HOM05D002846 ORTHO05D002692 3.2e-10 69.7 212 33.5
Duzib213G0532 Durio zibethinus HOM05D002846 ORTHO05D002692 3.2e-10 69.7 216 31.5
RcHm_v2.0_Chr2g0159761 Rosa chinensis HOM05D002846 ORTHO05D002692 3.2e-10 69.7 200 33.0
Sabra16G0285000 Salix brachista HOM05D002846 ORTHO05D002692 3.2e-10 69.7 215 32.6
Atru.chr6.3164 Acer truncatum HOM05D002846 ORTHO05D002692 4.1e-10 69.3 239 33.5
FvH4_6g43420 Fragaria vesca HOM05D002846 ORTHO05D002692 4.1e-10 69.3 204 31.4
FAN14G0905 Fragaria x ananassa HOM05D002846 ORTHO05D002692 4.1e-10 69.3 199 31.2
BcaB06g26277 Brassica carinata HOM05D002846 ORTHO05D002692 7.1e-10 68.6 219 34.2
Medtr2g088590 Medicago truncatula HOM05D002846 ORTHO05D002692 7.1e-10 68.6 196 30.6
QL08p012603 Quercus lobata HOM05D002846 ORTHO05D002692 7.1e-10 68.6 204 32.4
SalBow1G8286 Salvia bowleyana HOM05D002846 ORTHO05D002692 7.1e-10 68.6 195 31.3
TPR.G4595 Trifolium pratense HOM05D002846 ORTHO05D002692 7.1e-10 68.6 201 33.3
Aqoxy4G01970 Aquilegia oxysepala HOM05D002846 ORTHO05D002692 9.2e-10 68.2 220 32.3
C05p41700 Brassica napus HOM05D002846 ORTHO05D002692 9.2e-10 68.2 204 35.8
BolC5t32905H Brassica oleracea HOM05D002846 ORTHO05D002692 9.2e-10 68.2 204 35.8
Sp3g19720 Schrenkiella parvula HOM05D002846 ORTHO05D002692 9.2e-10 68.2 198 34.8
Nitab4.5_0002083g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 1.2e-09 67.8 207 33.8
A05p27020 Brassica napus HOM05D002846 ORTHO05D002692 2.1e-09 67.0 205 36.6
BraA05t21588Z Brassica rapa HOM05D002846 ORTHO05D002692 2.1e-09 67.0 205 36.6
FAN02G4078 Fragaria x ananassa HOM05D002846 ORTHO05D002692 2.1e-09 67.0 199 30.7
ATR0697G184 Amborella trichopoda HOM05D002846 ORTHO05D002692 2.7e-09 66.6 200 31.5
Lj3g0002811 Lotus japonicus HOM05D002846 ORTHO05D002692 2.7e-09 66.6 203 34.0
Sabra02G0175700 Salix brachista HOM05D002846 ORTHO05D002692 2.7e-09 66.6 201 34.3
Hma1.2p1_0249F.1_g102340 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 3.5e-09 66.2 207 33.8
Manes.13G071601 Manihot esculenta HOM05D002846 ORTHO05D002692 3.5e-09 66.2 205 32.2
PSO210G5289 Papaver somniferum HOM05D002846 ORTHO05D002692 3.5e-09 66.2 226 31.0
BolC1t04204H Brassica oleracea HOM05D002846 ORTHO05D002692 4.6e-09 65.9 200 33.5
Carub.0003s2176 Capsella rubella HOM05D002846 ORTHO05D002692 4.6e-09 65.9 218 30.7
Sopen07g026090 Solanum pennellii HOM05D002846 ORTHO05D002692 4.6e-09 65.9 178 36.0
Cfa020399 Carpinus fangiana HOM05D002846 ORTHO05D002692 6.0e-09 65.5 195 29.7
Ca_26241_v3 Cicer arietinum L. HOM05D002846 ORTHO05D002692 6.0e-09 65.5 204 32.4
Haze_09635 Corylus avellana HOM05D002846 ORTHO05D002692 6.0e-09 65.5 198 31.8
Nitab4.5_0001884g0020 Nicotiana tabacum HOM05D002846 ORTHO05D002692 6.0e-09 65.5 227 31.3
Sed0016321 Sechium edule HOM05D002846 ORTHO05D002692 6.0e-09 65.5 207 31.9
Actinidia27214 Actinidia chinensis HOM05D002846 ORTHO05D002692 7.8e-09 65.1 210 31.9
Cfa014424 Carpinus fangiana HOM05D002846 ORTHO05D002692 7.8e-09 65.1 199 34.2
Potri.001G419400 Populus trichocarpa HOM05D002846 ORTHO05D002692 7.8e-09 65.1 213 33.8
Solyc07g052460.3 Solanum lycopersicum HOM05D002846 ORTHO05D002692 7.8e-09 65.1 175 32.0
Gohir.A01G076300 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.0e-08 64.7 220 30.9
Lalb_Chr01g0005591 Lupinus albus HOM05D002846 ORTHO05D002692 1.0e-08 64.7 216 31.5
Phvul.011G105200 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 1.0e-08 64.7 211 31.8
Sopen05g027000 Solanum pennellii HOM05D002846 ORTHO05D002692 1.3e-08 64.3 171 36.3
A01p33250 Brassica napus HOM05D002846 ORTHO05D002692 1.7e-08 63.9 202 35.6
BraA01t03443Z Brassica rapa HOM05D002846 ORTHO05D002692 1.7e-08 63.9 202 35.6
CSS0004659 Camellia sinensis var. sinensis HOM05D002846 ORTHO05D002692 1.7e-08 63.9 210 33.8
Gohir.D01G063800 Gossypium hirsutum HOM05D002846 ORTHO05D002692 1.7e-08 63.9 220 31.4
HanXRQChr15g0496381 Helianthus annuus HOM05D002846 ORTHO05D002692 1.7e-08 63.9 202 33.2
MBI02_g23957_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 1.7e-08 63.9 213 34.3
PGSC0003DMG400008737 Solanum tuberosum HOM05D002846 ORTHO05D002692 1.7e-08 63.9 223 32.7
C01p42460 Brassica napus HOM05D002846 ORTHO05D002692 3.0e-08 63.2 202 33.7
Dinv40727 Davidia involucrata HOM05D002846 ORTHO05D002692 3.0e-08 63.2 194 33.0
Lalb_Chr19g0135751 Lupinus albus HOM05D002846 ORTHO05D002692 3.9e-08 62.8 215 30.2
Nn1g07065 Nelumbo nucifera HOM05D002846 ORTHO05D002692 3.9e-08 62.8 211 29.9
Nitab4.5_0000006g0090 Nicotiana tabacum HOM05D002846 ORTHO05D002692 3.9e-08 62.8 240 31.2
Gorai.002G084300 Gossypium raimondii HOM05D002846 ORTHO05D002692 5.1e-08 62.4 220 30.9
FAN09G0250 Fragaria x ananassa HOM05D002846 ORTHO05D002692 8.6e-08 61.6 196 33.7
Sabra11G0121900 Salix brachista HOM05D002846 ORTHO05D002692 8.6e-08 61.6 212 30.7
VMungo0971G0001 Vigna mungo HOM05D002846 ORTHO05D002692 8.6e-08 61.6 207 30.4
BcaC09g49107 Brassica carinata HOM05D002846 ORTHO05D002692 1.5e-07 60.8 200 32.5
FAN25G2313 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.5e-07 60.8 220 30.9
MD03G1209200 Malus domestica HOM05D002846 ORTHO05D002692 1.5e-07 60.8 208 32.2
Cc05_g04910 Coffea canephora HOM05D002846 ORTHO05D002692 1.9e-07 60.5 208 31.2
Haze_12882 Corylus avellana HOM05D002846 ORTHO05D002692 1.9e-07 60.5 197 32.5
Prupe.3G218700 Prunus persica HOM05D002846 ORTHO05D002692 1.9e-07 60.5 209 30.1
Aa31LG8G8340 Aethionema arabicum HOM05D002846 ORTHO05D002692 2.5e-07 60.1 196 30.6
Manes.03G127850 Manihot esculenta HOM05D002846 ORTHO05D002692 2.5e-07 60.1 211 30.3
MSTRG.14152 Avicennia marina HOM05D002846 ORTHO05D002692 3.3e-07 59.7 199 33.2
TPR.G19979 Trifolium pratense HOM05D002846 ORTHO05D002692 3.3e-07 59.7 218 28.0
Gohir.A13G140400 Gossypium hirsutum HOM05D002846 ORTHO05D002692 4.3e-07 59.3 199 32.7
Medtr2g083300 Medicago truncatula HOM05D002846 ORTHO05D002692 4.3e-07 59.3 217 28.1
Peaxi162Scf00407g00210 Petunia axillaris HOM05D002846 ORTHO05D002692 4.3e-07 59.3 208 32.2
Gorai.013G163000 Gossypium raimondii HOM05D002846 ORTHO05D002692 5.6e-07 58.9 199 32.7
MD09G1107000 Malus domestica HOM05D002846 ORTHO05D002692 5.6e-07 58.9 205 27.8
Psat5g251520 Pisum sativum HOM05D002846 ORTHO05D002692 5.6e-07 58.9 210 27.1
COL.COLO4_27687 Corchorus olitorius HOM05D002846 ORTHO05D002692 9.6e-07 58.2 178 33.1
MBI18_g03004_MAGBIO Magnolia biondii HOM05D002846 ORTHO05D002692 9.6e-07 58.2 98 43.9
Duzib251G0618 Durio zibethinus HOM05D002846 ORTHO05D002692 1.2e-06 57.8 211 33.2
FAN21G2316 Fragaria x ananassa HOM05D002846 ORTHO05D002692 1.2e-06 57.8 220 30.0
BcaC05g28139 Brassica carinata HOM05D002846 ORTHO05D002692 1.6e-06 57.4 203 31.5
Thhalv10021505m.g Eutrema salsugineum HOM05D002846 ORTHO05D002692 1.6e-06 57.4 199 31.7
Oeu020128.1 Olea europaea HOM05D002846 ORTHO05D002692 1.6e-06 57.4 100 45.0
Potri.002G230300 Populus trichocarpa HOM05D002846 ORTHO05D002692 1.6e-06 57.4 116 37.9
ClCG02G008550 Citrullus lanatus HOM05D002846 ORTHO05D002692 2.8e-06 56.6 200 31.0
Eucgr.F00971 Eucalyptus grandis HOM05D002846 ORTHO05D002692 2.8e-06 56.6 216 32.4
Phvul.005G114400 Phaseolus vulgaris HOM05D002846 ORTHO05D002692 2.8e-06 56.6 219 31.5
AL3G35830 Arabidopsis lyrata HOM05D002846 ORTHO05D002692 3.6e-06 56.2 203 31.0
arahy.Tifrunner.gnm1.ann1.53UQ7J Arachis hypogaea HOM05D002846 ORTHO05D002692 3.6e-06 56.2 131 38.9
Glyma.12G194600 Glycine max HOM05D002846 ORTHO05D002692 3.6e-06 56.2 210 31.0
Oeu041933.1 Olea europaea HOM05D002846 ORTHO05D002692 3.6e-06 56.2 209 30.6
Sed0000680 Sechium edule HOM05D002846 ORTHO05D002692 3.6e-06 56.2 194 30.4
GSVIVG01001985001 Vitis vinifera HOM05D002846 ORTHO05D002692 3.6e-06 56.2 209 30.1
ClCG05G014610 Citrullus lanatus HOM05D002846 ORTHO05D002692 6.2e-06 55.5 207 29.0
Migut.H01224 Erythranthe guttata HOM05D002846 ORTHO05D002692 6.2e-06 55.5 205 32.2
vmacro12218 Vaccinium macrocarpon HOM05D002846 ORTHO05D002692 6.2e-06 55.5 213 29.1
Hma1.2p1_1344F.1_g277060 Hydrangea macrophylla HOM05D002846 ORTHO05D002692 8.1e-06 55.1 207 30.0
Medtr4g046870 Medicago truncatula HOM05D002846 ORTHO05D002692 8.1e-06 55.1 119 39.5


User provided reference genes

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