Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2394 Papaver somniferum HOM05D007542 ORTHO05D009519 9.1e-120 433.7 241 100.0
Hma1.2p1_1332F.1_g276050 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 7.7e-34 148.3 233 46.4
TAR643G0006 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.0e-33 147.9 234 45.7
Nn1g03444 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.2e-33 146.7 235 46.0
Dinv22244 Davidia involucrata HOM05D007542 ORTHO05D009519 1.0e-30 137.9 221 44.8
GSVIVG01037700001 Vitis vinifera HOM05D007542 ORTHO05D009519 3.9e-30 136.0 237 47.3
Prupe.4G220300 Prunus persica HOM05D007542 ORTHO05D009519 1.1e-29 134.4 233 41.6
RcHm_v2.0_Chr5g0040991 Rosa chinensis HOM05D007542 ORTHO05D009519 1.5e-29 134.0 235 41.3
Cpa.g.sc12.265 Carica papaya HOM05D007542 ORTHO05D009519 2.6e-29 133.3 239 42.3
FAN21G0453 Fragaria x ananassa HOM05D007542 ORTHO05D009519 7.4e-29 131.7 233 39.9
FAN16G3720 Fragaria x ananassa HOM05D007542 ORTHO05D009519 9.7e-29 131.3 233 39.5
FvH4_3g23270 Fragaria vesca HOM05D007542 ORTHO05D009519 6.3e-28 128.6 233 39.1
Cc05_g14120 Coffea canephora HOM05D007542 ORTHO05D009519 1.1e-27 127.9 245 42.4
FAN25G0364 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.4e-27 127.5 233 37.3
FAN25G1685 Fragaria x ananassa HOM05D007542 ORTHO05D009519 1.4e-27 127.5 233 37.3
Manes.03G133100 Manihot esculenta HOM05D007542 ORTHO05D009519 1.4e-27 127.5 234 43.6
Eucgr.F00716 Eucalyptus grandis HOM05D007542 ORTHO05D009519 1.8e-27 127.1 245 41.2
TWI38G0725 Tripterygium wilfordii HOM05D007542 ORTHO05D009519 1.8e-27 127.1 241 39.8
Duzib170G0581 Durio zibethinus HOM05D007542 ORTHO05D009519 4.1e-27 125.9 236 41.5
FAN11G1962 Fragaria x ananassa HOM05D007542 ORTHO05D009519 4.1e-27 125.9 229 38.9
Ciclev10009585m.g Citrus clementina HOM05D007542 ORTHO05D009519 5.3e-27 125.6 237 43.5
QL08p006891 Quercus lobata HOM05D007542 ORTHO05D009519 6.9e-27 125.2 235 41.7
Prupe.4G220200 Prunus persica HOM05D007542 ORTHO05D009519 1.5e-26 124.0 235 40.0
MD11G1212200 Malus domestica HOM05D007542 ORTHO05D009519 2.0e-26 123.6 233 40.8
Nitab4.5_0000328g0130 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.6e-26 123.2 237 38.8
Aqoxy1G03049 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 3.4e-26 122.9 233 44.2
Potri.011G087000 Populus trichocarpa HOM05D007542 ORTHO05D009519 4.5e-26 122.5 241 41.1
MSTRG.6947 Avicennia marina HOM05D007542 ORTHO05D009519 5.9e-26 122.1 232 40.5
COL.COLO4_09703 Corchorus olitorius HOM05D007542 ORTHO05D009519 7.7e-26 121.7 242 39.3
Thecc.07G031100 Theobroma cacao HOM05D007542 ORTHO05D009519 1.7e-25 120.6 236 41.9
TAR626G0917 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.7e-25 120.6 228 40.4
Gorai.002G092100 Gossypium raimondii HOM05D007542 ORTHO05D009519 2.2e-25 120.2 237 40.1
Atru.chr2.3499 Acer truncatum HOM05D007542 ORTHO05D009519 3.8e-25 119.4 245 39.6
Cfa020302 Carpinus fangiana HOM05D007542 ORTHO05D009519 5.0e-25 119.0 236 38.6
Gohir.D01G069700 Gossypium hirsutum HOM05D007542 ORTHO05D009519 8.5e-25 118.2 237 39.7
Oeu026398.1 Olea europaea HOM05D007542 ORTHO05D009519 5.5e-24 115.5 241 40.2
PGSC0003DMG400014384 Solanum tuberosum HOM05D007542 ORTHO05D009519 5.5e-24 115.5 246 37.4
MD03G1195800 Malus domestica HOM05D007542 ORTHO05D009519 2.7e-23 113.2 231 38.5
CSS0027066 Camellia sinensis var. sinensis HOM05D007542 ORTHO05D009519 7.9e-23 111.7 242 39.7
DCAR_016720 Daucus carota HOM05D007542 ORTHO05D009519 7.9e-23 111.7 242 38.0
Sabra11G0071000 Salix brachista HOM05D007542 ORTHO05D009519 7.9e-23 111.7 247 38.5
Nn1g07236 Nelumbo nucifera HOM05D007542 ORTHO05D009519 2.3e-22 110.2 232 40.1
CiPaw.11G192900 Carya illinoinensis HOM05D007542 ORTHO05D009519 3.9e-22 109.4 240 40.0
MBI10_g09179_MAGBIO Magnolia biondii HOM05D007542 ORTHO05D009519 8.8e-22 108.2 229 39.7
MELO3C014190.2 Cucumis melo HOM05D007542 ORTHO05D009519 1.1e-21 107.8 241 33.6
CAN.G492.20 Capsicum annuum HOM05D007542 ORTHO05D009519 1.5e-21 107.5 240 38.3
Dinv40786 Davidia involucrata HOM05D007542 ORTHO05D009519 2.0e-21 107.1 234 37.6
TAR624G0015 Trochodendron aralioides HOM05D007542 ORTHO05D009519 1.3e-20 104.4 221 39.8
CsaV3_3G004930 Cucumis sativus L. HOM05D007542 ORTHO05D009519 2.2e-20 103.6 241 32.8
Solyc10g006150.3 Solanum lycopersicum HOM05D007542 ORTHO05D009519 2.2e-20 103.6 221 38.0
Nitab4.5_0002826g0080 Nicotiana tabacum HOM05D007542 ORTHO05D009519 6.3e-20 102.1 237 36.7
Migut.H01805 Erythranthe guttata HOM05D007542 ORTHO05D009519 1.1e-19 101.3 236 36.0
Glyma.18G092800 Glycine max HOM05D007542 ORTHO05D009519 1.1e-19 101.3 236 37.7
Rhsim06G0222000 Rhododendron simsii HOM05D007542 ORTHO05D009519 2.4e-19 100.1 239 34.3
Medtr5g093430 Medicago truncatula HOM05D007542 ORTHO05D009519 4.1e-19 99.4 227 37.9
LjContig00272g0021523 Lotus japonicus HOM05D007542 ORTHO05D009519 7.0e-19 98.6 219 37.0
Lj6g0015208 Lotus japonicus HOM05D007542 ORTHO05D009519 1.2e-18 97.8 222 36.9
Glyma.08G319700 Glycine max HOM05D007542 ORTHO05D009519 2.0e-18 97.1 236 37.7
Lalb_Chr04g0248281 Lupinus albus HOM05D007542 ORTHO05D009519 2.0e-18 97.1 224 36.6
Phvul.006G046800 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 2.6e-18 96.7 236 37.7
Sopen07g033030 Solanum pennellii HOM05D007542 ORTHO05D009519 1.7e-17 94.0 228 32.9
Oeu008012.1 Olea europaea HOM05D007542 ORTHO05D009519 1.1e-16 91.3 223 35.9
PGSC0003DMG400022335 Solanum tuberosum HOM05D007542 ORTHO05D009519 1.1e-16 91.3 215 32.6
arahy.Tifrunner.gnm1.ann1.T42YYR Arachis hypogaea HOM05D007542 ORTHO05D009519 4.2e-16 89.4 229 33.6
Gohir.A01G083201 Gossypium hirsutum HOM05D007542 ORTHO05D009519 7.2e-16 88.6 116 44.0
Medtr5g093440 Medicago truncatula HOM05D007542 ORTHO05D009519 1.2e-15 87.8 223 37.2
Psat2g012360 Pisum sativum HOM05D007542 ORTHO05D009519 1.2e-15 87.8 219 36.1
arahy.Tifrunner.gnm1.ann1.C8UBJW Arachis hypogaea HOM05D007542 ORTHO05D009519 2.1e-15 87.0 220 35.0
Lj6g0001233 Lotus japonicus HOM05D007542 ORTHO05D009519 2.1e-15 87.0 249 34.5
Peaxi162Scf00235g00059 Petunia axillaris HOM05D007542 ORTHO05D009519 2.1e-15 87.0 207 35.3
Actinidia05075 Actinidia chinensis HOM05D007542 ORTHO05D009519 2.7e-15 86.7 223 36.3
CAN.G337.69 Capsicum annuum HOM05D007542 ORTHO05D009519 4.7e-15 85.9 232 34.1
TPR.G1179 Trifolium pratense HOM05D007542 ORTHO05D009519 8.0e-15 85.1 229 35.4
Ca_06340_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 1.4e-14 84.3 223 35.4
arahy.Tifrunner.gnm1.ann1.ENS6UV Arachis hypogaea HOM05D007542 ORTHO05D009519 1.8e-14 84.0 237 32.1
Psat2g012400 Pisum sativum HOM05D007542 ORTHO05D009519 2.3e-14 83.6 220 33.6
MSTRG.12988 Avicennia marina HOM05D007542 ORTHO05D009519 3.0e-14 83.2 228 35.1
Ca_25812_v3 Cicer arietinum L. HOM05D007542 ORTHO05D009519 4.4e-13 79.3 222 32.9
Glyma.14G021700 Glycine max HOM05D007542 ORTHO05D009519 4.4e-13 79.3 220 36.4
Sopen10g002100 Solanum pennellii HOM05D007542 ORTHO05D009519 4.4e-13 79.3 116 44.8
Phvul.008G269700 Phaseolus vulgaris HOM05D007542 ORTHO05D009519 3.7e-12 76.3 219 34.2
TPR.G17892 Trifolium pratense HOM05D007542 ORTHO05D009519 4.8e-12 75.9 225 33.3
Hma1.2p1_3935F.1_g338010 Hydrangea macrophylla HOM05D007542 ORTHO05D009519 6.3e-12 75.5 168 39.3
VMungo0647G1207 Vigna mungo HOM05D007542 ORTHO05D009519 1.1e-11 74.7 235 32.3
Sc16g0005830 Simmondsia chinensis HOM05D007542 ORTHO05D009519 1.4e-11 74.3 240 32.1
Medtr3g053160 Medicago truncatula HOM05D007542 ORTHO05D009519 5.9e-10 68.9 223 29.1
EL10Ac4g07752 Beta vulgaris HOM05D007542 ORTHO05D009519 7.7e-10 68.6 236 30.9
Lj1P878T38 Lonicera japonica HOM05D007542 ORTHO05D009519 1.0e-09 68.2 156 37.2
CDE08G0529 Ceratophyllum demersum HOM05D007542 ORTHO05D009519 3.2e-08 63.2 187 29.9
Sc03g0008420 Simmondsia chinensis HOM05D007542 ORTHO05D009519 5.5e-08 62.4 229 31.0
Aqoxy1G03452 Aquilegia oxysepala HOM05D007542 ORTHO05D009519 7.2e-08 62.0 127 34.6
VMungo0540G1120 Vigna mungo HOM05D007542 ORTHO05D009519 7.2e-08 62.0 241 29.9
Nitab4.5_0004829g0120 Nicotiana tabacum HOM05D007542 ORTHO05D009519 2.7e-07 60.1 70 48.6
Os01g0532300 Oryza sativa ssp. japonica HOM05D007542 ORTHO05D009519 1.8e-06 57.4 229 31.0


User provided reference genes

Program Settings