Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2330 Papaver somniferum HOM05D004108 ORTHO05D004849 5.5e-83 310.8 149 100.0
PSO675G8146 Papaver somniferum HOM05D004108 ORTHO05D004849 1.1e-78 296.6 149 95.3
Aqoxy5G01593 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 5.6e-27 124.8 160 48.1
Duzib093G0346 Durio zibethinus HOM05D004108 ORTHO05D004849 8.1e-26 120.9 150 46.7
PGR083G0993 Punica granatum HOM05D004108 ORTHO05D004849 3.1e-25 119.0 137 49.6
Manes.18G023000 Manihot esculenta HOM05D004108 ORTHO05D004849 5.2e-25 118.2 141 46.1
Thecc.08G029500 Theobroma cacao HOM05D004108 ORTHO05D004849 6.9e-25 117.9 142 46.5
Rhsim06G0031200 Rhododendron simsii HOM05D004108 ORTHO05D004849 9.0e-25 117.5 144 45.8
TAR381G0780 Trochodendron aralioides HOM05D004108 ORTHO05D004849 1.2e-24 117.1 121 50.4
Gorai.002G127100 Gossypium raimondii HOM05D004108 ORTHO05D004849 2.6e-24 115.9 137 43.1
Duzib116G0345 Durio zibethinus HOM05D004108 ORTHO05D004849 9.9e-24 114.0 150 43.3
Gohir.A01G114900 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.3e-23 113.6 136 43.4
Sc15g0007040 Simmondsia chinensis HOM05D004108 ORTHO05D004849 1.3e-23 113.6 136 47.1
QL02p009008 Quercus lobata HOM05D004108 ORTHO05D004849 2.2e-23 112.8 138 47.1
CDE02G0765 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 3.8e-23 112.1 117 52.1
Gohir.D01G103300 Gossypium hirsutum HOM05D004108 ORTHO05D004849 3.8e-23 112.1 137 41.6
CiPaw.15G080700 Carya illinoinensis HOM05D004108 ORTHO05D004849 1.1e-22 110.5 142 43.7
Gohir.D05G196000 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.1e-22 110.5 150 41.3
Gorai.009G200900 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.1e-22 110.5 150 41.3
Potri.005G228600 Populus trichocarpa HOM05D004108 ORTHO05D004849 1.1e-22 110.5 138 42.0
Gohir.A05G192800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 1.4e-22 110.2 150 41.3
TWI56G1092 Tripterygium wilfordii HOM05D004108 ORTHO05D004849 1.4e-22 110.2 145 44.1
GSVIVG01009730001 Vitis vinifera HOM05D004108 ORTHO05D004849 1.4e-22 110.2 139 46.8
Sabra05G0176500 Salix brachista HOM05D004108 ORTHO05D004849 1.9e-22 109.8 137 41.6
VMungo0647G0771 Vigna mungo HOM05D004108 ORTHO05D004849 3.2e-22 109.0 141 41.1
CDE06G1682 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 7.1e-22 107.8 123 52.0
Actinidia22531 Actinidia chinensis HOM05D004108 ORTHO05D004849 9.3e-22 107.5 139 46.0
AUR62003937 Chenopodium quinoa HOM05D004108 ORTHO05D004849 9.3e-22 107.5 136 44.9
AUR62014478 Chenopodium quinoa HOM05D004108 ORTHO05D004849 9.3e-22 107.5 136 44.9
CSS0043508 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 1.2e-21 107.1 141 44.7
COL.COLO4_26289 Corchorus olitorius HOM05D004108 ORTHO05D004849 1.6e-21 106.7 154 44.8
Glyma.06G031000 Glycine max HOM05D004108 ORTHO05D004849 1.6e-21 106.7 145 42.8
TPR.G20143 Trifolium pratense HOM05D004108 ORTHO05D004849 3.5e-21 105.5 136 39.0
CSS0044578 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 4.6e-21 105.1 141 44.7
Ciclev10002766m.g Citrus clementina HOM05D004108 ORTHO05D004849 4.6e-21 105.1 151 40.4
DCAR_019539 Daucus carota HOM05D001676 ORTHO05D001539 6.0e-21 104.8 141 44.7
Glyma.17G251800 Glycine max HOM05D004108 ORTHO05D004849 1.0e-20 104.0 144 40.3
Hund26890 Selenicereus undatus HOM05D004108 ORTHO05D004849 1.3e-20 103.6 141 45.4
Hund29908 Selenicereus undatus HOM05D004108 ORTHO05D004849 1.3e-20 103.6 141 45.4
Cfa018174 Carpinus fangiana HOM05D004108 ORTHO05D004849 1.7e-20 103.2 140 44.3
Lalb_Chr08g0245901 Lupinus albus HOM05D004108 ORTHO05D004849 1.7e-20 103.2 143 41.3
Medtr1g022395 Medicago truncatula HOM05D004108 ORTHO05D004849 2.3e-20 102.8 146 43.2
Phvul.001G013200 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 2.3e-20 102.8 140 40.7
EL10Ac1g00610 Beta vulgaris HOM05D004108 ORTHO05D004849 3.0e-20 102.4 149 44.3
Nitab4.5_0002224g0100 Nicotiana tabacum HOM05D004108 ORTHO05D004849 3.0e-20 102.4 137 43.1
FAN15G0289 Fragaria x ananassa HOM05D004108 ORTHO05D004849 3.9e-20 102.1 155 38.7
Gohir.A05G258800 Gossypium hirsutum HOM05D004108 ORTHO05D004849 3.9e-20 102.1 154 40.9
Ca_13362_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 5.1e-20 101.7 143 39.2
Ca_15505_v3 Cicer arietinum L. HOM05D004108 ORTHO05D004849 5.1e-20 101.7 136 43.4
Glyma.04G030900 Glycine max HOM05D004108 ORTHO05D004849 6.6e-20 101.3 143 40.6
Eucgr.F01582 Eucalyptus grandis HOM05D004108 ORTHO05D004849 8.7e-20 100.9 142 43.7
CANSAT25G1850 Cannabis sativa HOM05D004108 ORTHO05D004849 1.1e-19 100.5 155 41.3
Glyma.14G073200 Glycine max HOM05D004108 ORTHO05D004849 1.9e-19 99.8 136 38.2
Lj5g0010725 Lotus japonicus HOM05D004108 ORTHO05D004849 1.9e-19 99.8 137 40.9
Gohir.D05G260600 Gossypium hirsutum HOM05D004108 ORTHO05D004849 2.5e-19 99.4 154 39.6
Lj1g0012803 Lotus japonicus HOM05D004108 ORTHO05D004849 2.5e-19 99.4 146 39.7
MBI10_g18267_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 2.5e-19 99.4 124 47.6
Sabra02G0027700 Salix brachista HOM05D004108 ORTHO05D004849 2.5e-19 99.4 137 41.6
FAN27G1128 Fragaria x ananassa HOM05D004108 ORTHO05D004849 4.3e-19 98.6 155 38.7
MELO3C003817.2 Cucumis melo HOM05D004108 ORTHO05D004849 7.3e-19 97.8 139 45.3
CsaV3_3G045320 Cucumis sativus L. HOM05D004108 ORTHO05D004849 7.3e-19 97.8 139 42.4
Potri.002G034500 Populus trichocarpa HOM05D004108 ORTHO05D004849 7.3e-19 97.8 136 42.6
SGA_v2.0_scaffold326G48731 Striga asiatica HOM05D004108 ORTHO05D004849 7.3e-19 97.8 140 41.4
Cc10_g02670 Coffea canephora HOM05D004108 ORTHO05D004849 9.6e-19 97.4 154 41.6
RcHm_v2.0_Chr6g0301271 Rosa chinensis HOM05D004108 ORTHO05D004849 9.6e-19 97.4 153 43.1
Gorai.009G272400 Gossypium raimondii HOM05D004108 ORTHO05D004849 1.3e-18 97.1 148 41.9
ATR0568G230 Amborella trichopoda HOM05D004108 ORTHO05D004849 1.6e-18 96.7 133 43.6
Haze_17929 Corylus avellana HOM05D004108 ORTHO05D004849 1.6e-18 96.7 116 44.8
Sed0024175 Sechium edule HOM05D004108 ORTHO05D004849 1.6e-18 96.7 124 46.0
MSTRG.22304 Avicennia marina HOM05D004108 ORTHO05D004849 2.1e-18 96.3 137 43.8
ECA246G2053 Erigeron canadensis HOM05D004108 ORTHO05D004849 4.8e-18 95.1 150 36.7
Oeu007023.1 Olea europaea HOM05D004108 ORTHO05D004849 6.2e-18 94.7 139 41.0
Psat6g008240 Pisum sativum HOM05D004108 ORTHO05D004849 6.2e-18 94.7 141 37.6
Rhsim06G0031500 Rhododendron simsii HOM05D004108 ORTHO05D004849 8.1e-18 94.4 118 47.5
Rhsim07G0240700 Rhododendron simsii HOM05D004108 ORTHO05D004849 8.1e-18 94.4 134 38.8
RhsimUnG0051600 Rhododendron simsii HOM05D004108 ORTHO05D004849 8.1e-18 94.4 134 38.8
Atru.chr13.446 Acer truncatum HOM05D004108 ORTHO05D004849 1.4e-17 93.6 145 38.6
MSTRG.24284 Avicennia marina HOM05D004108 ORTHO05D004849 1.8e-17 93.2 141 44.0
HanXRQChr05g0156841 Helianthus annuus HOM05D004108 ORTHO05D004849 1.8e-17 93.2 141 39.0
Cpa.g.sc31.39 Carica papaya HOM05D004108 ORTHO05D004849 2.4e-17 92.8 115 47.0
Hma1.2p1_0203F.1_g086230 Hydrangea macrophylla HOM05D004108 ORTHO05D004849 3.1e-17 92.4 142 41.5
Lalb_Chr14g0369381 Lupinus albus HOM05D004108 ORTHO05D004849 4.0e-17 92.0 137 38.7
ClCG08G014950 Citrullus lanatus HOM05D004108 ORTHO05D004849 5.3e-17 91.7 140 42.1
FAN20G2373 Fragaria x ananassa HOM05D004108 ORTHO05D004849 5.3e-17 91.7 156 34.6
Glyma.06G031100 Glycine max HOM05D004108 ORTHO05D004849 5.3e-17 91.7 142 37.3
Medtr3g111970 Medicago truncatula HOM05D004108 ORTHO05D004849 5.3e-17 91.7 145 41.4
Psat5g012160 Pisum sativum HOM05D004108 ORTHO05D004849 6.9e-17 91.3 144 43.1
Sopen04g034130 Solanum pennellii HOM05D004108 ORTHO05D004849 9.0e-17 90.9 136 40.4
PGSC0003DMG400003688 Solanum tuberosum HOM05D004108 ORTHO05D004849 9.0e-17 90.9 136 39.0
MELO3C010952.2 Cucumis melo HOM05D004108 ORTHO05D004849 1.2e-16 90.5 141 42.6
CsaV3_2G028830 Cucumis sativus L. HOM05D004108 ORTHO05D004849 1.2e-16 90.5 140 42.9
DCAR_020978 Daucus carota HOM05D004108 ORTHO05D004849 1.2e-16 90.5 116 44.0
VMungo1309G0255 Vigna mungo HOM05D004108 ORTHO05D004849 1.2e-16 90.5 142 36.6
MD08G1029700 Malus domestica HOM05D004108 ORTHO05D004849 1.5e-16 90.1 143 40.6
Prupe.1G377400 Prunus persica HOM05D004108 ORTHO05D004849 1.5e-16 90.1 134 38.1
Lsat_1_v5_gn_5_27881 Lactuca sativa HOM05D004108 ORTHO05D004849 2.0e-16 89.7 141 39.0
CANSAT25G0460 Cannabis sativa HOM05D004108 ORTHO05D004849 2.6e-16 89.4 147 42.9
Solyc04g080540.2 Solanum lycopersicum HOM05D004108 ORTHO05D004849 3.4e-16 89.0 136 39.7
Migut.N00486 Erythranthe guttata HOM05D004108 ORTHO05D004849 1.3e-15 87.0 139 39.6
FvH4_2g39630 Fragaria vesca HOM05D004108 ORTHO05D004849 1.3e-15 87.0 157 35.7
HPP92_003110 Vanilla planifolia HOM05D004108 ORTHO05D004849 4.9e-15 85.1 138 42.0
CDE11G1036 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 6.4e-15 84.7 137 40.9
Dinv36099 Davidia involucrata HOM05D004108 ORTHO05D004849 1.4e-14 83.6 118 43.2
Sed0010517 Sechium edule HOM05D004108 ORTHO05D004849 1.4e-14 83.6 136 40.4
unitig_899.g15617 Utricularia gibba HOM05D004108 ORTHO05D004849 1.4e-14 83.6 140 38.6
Lsat_1_v5_gn_4_117601 Lactuca sativa HOM05D004108 ORTHO05D004849 1.9e-14 83.2 141 39.7
Phvul.009G058900 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 4.2e-14 82.0 160 33.8
THA.LOC104811375 Tarenaya hassleriana HOM05D004108 ORTHO05D004849 4.2e-14 82.0 136 39.0
AagrBONN_evm.TU.Sc2ySwM_344.1816 Anthoceros agrestis HOM05D004108 ORTHO05D004849 1.6e-13 80.1 144 36.8
TPR.G12369 Trifolium pratense HOM05D004108 ORTHO05D004849 1.6e-13 80.1 155 37.4
Carub.0001s1910 Capsella rubella HOM05D004108 ORTHO05D004849 3.5e-13 79.0 135 38.5
Eucgr.F01583 Eucalyptus grandis HOM05D004108 ORTHO05D004849 3.5e-13 79.0 164 37.8
MBI18_g38882_MAGBIO Magnolia biondii HOM05D004108 ORTHO05D004849 6.0e-13 78.2 141 39.7
CARHR020100 Cardamine hirsuta HOM05D004108 ORTHO05D004849 1.3e-12 77.0 135 37.8
Aqoxy3G01079 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 2.3e-12 76.3 137 38.0
Os03g0826800 Oryza sativa ssp. japonica HOM05D004108 ORTHO05D004849 3.0e-12 75.9 143 37.1
Nitab4.5_0001759g0080 Nicotiana tabacum HOM05D004108 ORTHO05D004849 3.9e-12 75.5 101 40.6
C05p18030 Brassica napus HOM05D004108 ORTHO05D004849 5.1e-12 75.1 135 37.8
CDE05G3574 Ceratophyllum demersum HOM05D004108 ORTHO05D004849 6.7e-12 74.7 138 38.4
BcaC05g25839 Brassica carinata HOM05D004108 ORTHO05D004849 8.7e-12 74.3 135 37.0
BolC5t30510H Brassica oleracea HOM05D004108 ORTHO05D004849 8.7e-12 74.3 135 37.0
A06p15710 Brassica napus HOM05D004108 ORTHO05D004849 1.1e-11 73.9 135 37.0
BraA06t24680Z Brassica rapa HOM05D004108 ORTHO05D004849 3.3e-11 72.4 135 36.3
Sp1g17400 Schrenkiella parvula HOM05D004108 ORTHO05D004849 4.3e-11 72.0 135 36.3
Aqoxy3G01077 Aquilegia oxysepala HOM05D004108 ORTHO05D004849 5.6e-11 71.6 135 37.0
Phvul.009G058800 Phaseolus vulgaris HOM05D004108 ORTHO05D004849 5.6e-11 71.6 137 32.8
SEGI_15325 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 9.6e-11 70.9 157 32.5
Nn2g14293 Nelumbo nucifera HOM05D004108 ORTHO05D004849 1.3e-10 70.5 119 35.3
Pp3c20_22930 Physcomitrium patens HOM05D004108 ORTHO05D004849 1.6e-10 70.1 137 34.3
BcaB07g31980 Brassica carinata HOM05D004108 ORTHO05D004849 2.8e-10 69.3 135 35.6
ECA232G2533 Erigeron canadensis HOM05D004108 ORTHO05D004849 2.8e-10 69.3 142 37.3
Pp3c16_7660 Physcomitrium patens HOM05D004108 ORTHO05D004849 2.8e-10 69.3 141 32.6
SEGI_30411 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 4.8e-10 68.6 151 36.4
HPP92_010562 Vanilla planifolia HOM05D004108 ORTHO05D004849 4.8e-10 68.6 135 33.3
arahy.Tifrunner.gnm1.ann1.9Q97AW Arachis hypogaea HOM05D004108 ORTHO05D004849 8.1e-10 67.8 136 31.6
AL1G32280 Arabidopsis lyrata HOM05D004108 ORTHO05D004849 1.1e-09 67.4 137 34.3
arahy.Tifrunner.gnm1.ann1.FG8SZ8 Arachis hypogaea HOM05D004108 ORTHO05D004849 1.4e-09 67.0 136 30.9
ClCG05G018840 Citrullus lanatus HOM05D004108 ORTHO05D004849 1.8e-09 66.6 102 41.2
Mapoly0203s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.8e-09 66.6 126 29.4
SEGI_02312 Sequoiadendron giganteum HOM05D004108 ORTHO05D004849 1.8e-09 66.6 157 32.5
AT1G19530 Arabidopsis thaliana HOM05D004108 ORTHO05D004849 2.4e-09 66.2 137 35.0
Thhalv10009139m.g Eutrema salsugineum HOM05D004108 ORTHO05D004849 3.1e-09 65.9 135 31.9
HanXRQChr16g0501561 Helianthus annuus HOM05D004108 ORTHO05D004849 9.0e-09 64.3 140 32.9
Mapoly0085s0006 Marchantia polymorpha HOM05D004108 ORTHO05D004849 9.0e-09 64.3 143 26.6
Actinidia30825 Actinidia chinensis HOM05D004108 ORTHO05D004849 1.5e-08 63.5 83 45.8
Actinidia38001 Actinidia chinensis HOM05D004108 ORTHO05D004849 2.6e-08 62.8 101 36.6
Peaxi162Scf00020g01711 Petunia axillaris HOM05D004108 ORTHO05D004849 3.4e-08 62.4 93 37.6
Aa31LG7G4180 Aethionema arabicum HOM05D004108 ORTHO05D004849 7.6e-08 61.2 135 35.6
Mapoly0085s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 7.6e-08 61.2 140 27.9
Mapoly0212s0008 Marchantia polymorpha HOM05D004108 ORTHO05D004849 9.9e-08 60.8 147 32.0
arahy.Tifrunner.gnm1.ann1.KZM1SZ Arachis hypogaea HOM05D004108 ORTHO05D004849 1.3e-07 60.5 107 40.2
arahy.Tifrunner.gnm1.ann1.RL39CN Arachis hypogaea HOM05D004108 ORTHO05D004849 1.3e-07 60.5 107 40.2
Actinidia29817 Actinidia chinensis HOM05D004108 ORTHO05D004849 3.8e-07 58.9 39 66.7
Mapoly0037s0069 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.8e-07 58.9 138 28.3
Mapoly0212s0007 Marchantia polymorpha HOM05D004108 ORTHO05D004849 3.8e-07 58.9 145 29.7
Mapoly0212s0009 Marchantia polymorpha HOM05D004108 ORTHO05D004849 1.9e-06 56.6 156 29.5
Sc02g0005700 Simmondsia chinensis HOM05D004108 ORTHO05D004849 2.4e-06 56.2 70 44.3
SMO348G0043 Selaginella moellendorffii HOM05D004108 ORTHO05D004849 3.2e-06 55.8 164 29.9
CSS0033768 Camellia sinensis var. sinensis HOM05D004108 ORTHO05D004849 5.5e-06 55.1 44 59.1
AUR62014477 Chenopodium quinoa HOM05D004108 ORTHO05D004849 5.5e-06 55.1 44 59.1
Glyma.18G124300 Glycine max HOM05D004108 ORTHO05D004849 5.5e-06 55.1 106 34.0
Mapoly0087s0044 Marchantia polymorpha HOM05D004108 ORTHO05D004849 9.3e-06 54.3 153 27.5


User provided reference genes

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