Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2316 Papaver somniferum HOM05D006996 ORTHO05D008961 3.9e-48 194.5 101 100.0
PSO675G8615 Papaver somniferum HOM05D006996 ORTHO05D008961 1.1e-47 193.0 88 100.0
Zm00001eb100890 Zea mays HOM05D006996 ORTHO05D008961 1.0e-40 169.9 85 88.2
Zm00001eb209620 Zea mays HOM05D006996 ORTHO05D008961 1.0e-40 169.9 85 88.2
MD09G1069700 Malus domestica HOM05D006996 ORTHO05D008961 3.3e-39 164.9 84 88.1
MD17G1095900 Malus domestica HOM05D006996 ORTHO05D008961 3.3e-39 164.9 84 88.1
RcHm_v2.0_Chr2g0159651 Rosa chinensis HOM05D006996 ORTHO05D008961 4.3e-39 164.5 84 88.1
Prupe.3G218000 Prunus persica HOM05D006996 ORTHO05D008961 7.4e-39 163.7 84 86.9
PGR042G2836 Punica granatum HOM05D006996 ORTHO05D008961 7.4e-39 163.7 84 86.9
QL08p033312 Quercus lobata HOM05D006996 ORTHO05D008961 7.4e-39 163.7 84 86.9
FvH4_6g43320 Fragaria vesca HOM05D006996 ORTHO05D008961 9.6e-39 163.3 84 86.9
FAN14G3455 Fragaria x ananassa HOM05D006996 ORTHO05D008961 9.6e-39 163.3 84 86.9
CiPaw.03G161100 Carya illinoinensis HOM05D006996 ORTHO05D008961 1.6e-38 162.5 84 86.9
HPP92_011134 Vanilla planifolia HOM05D006996 ORTHO05D008961 2.1e-38 162.2 83 84.3
CANSAT64G1676 Cannabis sativa HOM05D006996 ORTHO05D008961 2.8e-38 161.8 84 84.5
CsaV3_7G003680 Cucumis sativus L. HOM05D006996 ORTHO05D008961 2.8e-38 161.8 84 85.7
FAN05G4357 Fragaria x ananassa HOM05D006996 ORTHO05D008961 2.8e-38 161.8 84 85.7
Ciclev10017328m.g Citrus clementina HOM05D006996 ORTHO05D008961 3.7e-38 161.4 84 85.7
Peaxi162Scf00007g00930 Petunia axillaris HOM05D006996 ORTHO05D008961 3.7e-38 161.4 79 89.9
Gohir.A02G139400 Gossypium hirsutum HOM05D006996 ORTHO05D008961 6.3e-38 160.6 84 84.5
Gohir.D03G050100 Gossypium hirsutum HOM05D006996 ORTHO05D008961 6.3e-38 160.6 84 84.5
Gorai.003G051600 Gossypium raimondii HOM05D006996 ORTHO05D008961 6.3e-38 160.6 84 84.5
THA.LOC104800987 Tarenaya hassleriana HOM05D006996 ORTHO05D008961 6.3e-38 160.6 84 85.7
Eucgr.A01713 Eucalyptus grandis HOM05D006996 ORTHO05D008961 1.1e-37 159.8 84 84.5
CSS0007447 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.4e-37 159.5 84 84.5
Dinv39702 Davidia involucrata HOM05D006996 ORTHO05D008961 1.4e-37 159.5 84 84.5
Duzib128G0982 Durio zibethinus HOM05D006996 ORTHO05D008961 1.4e-37 159.5 85 84.7
FAN02G2509 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.4e-37 159.5 84 85.7
MELO3C018811.2 Cucumis melo HOM05D006996 ORTHO05D008961 1.8e-37 159.1 79 87.3
ClCG02G001860 Citrullus lanatus HOM05D006996 ORTHO05D008961 2.4e-37 158.7 83 85.5
CDE05G0144 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 3.1e-37 158.3 84 83.3
Potri.018G093501 Populus trichocarpa HOM05D006996 ORTHO05D008961 4.1e-37 157.9 82 84.1
Sed0014620 Sechium edule HOM05D006996 ORTHO05D008961 4.1e-37 157.9 84 83.3
Thecc.05G208500 Theobroma cacao HOM05D006996 ORTHO05D008961 4.1e-37 157.9 78 87.2
GSVIVG01012649001 Vitis vinifera HOM05D006996 ORTHO05D008961 4.1e-37 157.9 84 83.3
Cc05_g04850 Coffea canephora HOM05D006996 ORTHO05D008961 5.3e-37 157.5 84 83.3
Nitab4.5_0002137g0190 Nicotiana tabacum HOM05D006996 ORTHO05D008961 5.3e-37 157.5 79 87.3
BcaC07g42146 Brassica carinata HOM05D006996 ORTHO05D008961 6.9e-37 157.1 85 87.1
AL1G14970 Arabidopsis lyrata HOM05D006996 ORTHO05D008961 9.0e-37 156.8 86 86.0
AT1G05205 Arabidopsis thaliana HOM05D006996 ORTHO05D008961 9.0e-37 156.8 86 84.9
Manes.13G070800 Manihot esculenta HOM05D006996 ORTHO05D008961 9.0e-37 156.8 79 84.8
PGSC0003DMG400025488 Solanum tuberosum HOM05D006996 ORTHO05D008961 9.0e-37 156.8 78 87.2
Dinv05447 Davidia involucrata HOM05D006996 ORTHO05D008961 1.2e-36 156.4 84 83.3
Hma1.2p1_0957F.1_g241430 Hydrangea macrophylla HOM05D006996 ORTHO05D008961 1.2e-36 156.4 83 85.5
Sabra18G0080400 Salix brachista HOM05D006996 ORTHO05D008961 1.2e-36 156.4 82 82.9
Solyc07g052420.3 Solanum lycopersicum HOM05D006996 ORTHO05D008961 1.2e-36 156.4 78 85.9
C08p51920 Brassica napus HOM05D006996 ORTHO05D008961 1.5e-36 156.0 85 85.9
BolC8t52723H Brassica oleracea HOM05D006996 ORTHO05D008961 1.5e-36 156.0 85 85.9
BraA09t42088Z Brassica rapa HOM05D006996 ORTHO05D008961 1.5e-36 156.0 85 85.9
HanXRQChr11g0350381 Helianthus annuus HOM05D006996 ORTHO05D008961 2.0e-36 155.6 84 84.5
Sopen07g026050 Solanum pennellii HOM05D006996 ORTHO05D008961 2.0e-36 155.6 78 85.9
CDE11G0800 Ceratophyllum demersum HOM05D006996 ORTHO05D008961 2.6e-36 155.2 84 82.1
Thhalv10009219m.g Eutrema salsugineum HOM05D006996 ORTHO05D008961 2.6e-36 155.2 84 86.9
Sp1g04060 Schrenkiella parvula HOM05D006996 ORTHO05D008961 2.6e-36 155.2 84 86.9
SpUn0024_0080 Schrenkiella parvula HOM05D006996 ORTHO05D008961 2.6e-36 155.2 84 86.9
Aqoxy1G03305 Aquilegia oxysepala HOM05D006996 ORTHO05D008961 3.4e-36 154.8 87 80.5
Carub.0001s0448 Capsella rubella HOM05D006996 ORTHO05D008961 3.4e-36 154.8 84 84.5
Aa31LG1G19540 Aethionema arabicum HOM05D006996 ORTHO05D008961 4.5e-36 154.5 84 86.9
CSS0016840 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.5e-36 154.5 84 82.1
CAN.G846.6 Capsicum annuum HOM05D006996 ORTHO05D008961 4.5e-36 154.5 80 82.5
Lsat_1_v5_gn_5_163860 Lactuca sativa HOM05D006996 ORTHO05D008961 4.5e-36 154.5 84 84.5
Ah.11g047700 Amaranthus hybridus HOM05D006996 ORTHO05D008961 7.6e-36 153.7 83 84.3
A10p03740 Brassica napus HOM05D006996 ORTHO05D008961 7.6e-36 153.7 84 86.9
C05p03440 Brassica napus HOM05D006996 ORTHO05D008961 7.6e-36 153.7 84 86.9
BolC5t29123H Brassica oleracea HOM05D006996 ORTHO05D008961 7.6e-36 153.7 84 86.9
BraA10t42647Z Brassica rapa HOM05D006996 ORTHO05D008961 7.6e-36 153.7 84 86.9
Cfa014416 Carpinus fangiana HOM05D006996 ORTHO05D008961 1.0e-35 153.3 84 82.1
Oeu027249.1 Olea europaea HOM05D006996 ORTHO05D008961 1.0e-35 153.3 84 82.1
Hund01114 Selenicereus undatus HOM05D006996 ORTHO05D008961 1.7e-35 152.5 83 83.1
TWI18G0629 Tripterygium wilfordii HOM05D006996 ORTHO05D008961 1.7e-35 152.5 84 81.0
arahy.Tifrunner.gnm1.ann1.7T5QAW Arachis hypogaea HOM05D006996 ORTHO05D008961 3.8e-35 151.4 86 80.2
arahy.Tifrunner.gnm1.ann1.BHY6M8 Arachis hypogaea HOM05D006996 ORTHO05D008961 3.8e-35 151.4 86 80.2
arahy.Tifrunner.gnm1.ann1.MSE8LU Arachis hypogaea HOM05D006996 ORTHO05D008961 3.8e-35 151.4 86 80.2
arahy.Tifrunner.gnm1.ann1.QWF8TS Arachis hypogaea HOM05D006996 ORTHO05D008961 3.8e-35 151.4 86 80.2
ECA248G0348 Erigeron canadensis HOM05D006996 ORTHO05D008961 5.0e-35 151.0 79 84.8
Lj1A759T40 Lonicera japonica HOM05D006996 ORTHO05D008961 6.5e-35 150.6 84 82.1
Lj1A760T24 Lonicera japonica HOM05D006996 ORTHO05D008961 6.5e-35 150.6 84 82.1
Nn2g12174 Nelumbo nucifera HOM05D006996 ORTHO05D008961 1.1e-34 149.8 107 66.4
MSTRG.6557 Avicennia marina HOM05D006996 ORTHO05D008961 1.9e-34 149.1 84 81.0
Nitab4.5_0007092g0010 Nicotiana tabacum HOM05D006996 ORTHO05D008961 2.5e-34 148.7 79 84.8
EL10Ac5g11141 Beta vulgaris HOM05D006996 ORTHO05D008961 3.2e-34 148.3 83 79.5
TPR.G4182 Trifolium pratense HOM05D006996 ORTHO05D008961 3.2e-34 148.3 85 78.8
CARHR004680 Cardamine hirsuta HOM05D006996 ORTHO05D008961 4.2e-34 147.9 85 83.5
Medtr2g088460 Medicago truncatula HOM05D006996 ORTHO05D008961 4.2e-34 147.9 79 82.3
Actinidia30517 Actinidia chinensis HOM05D006996 ORTHO05D008961 7.2e-34 147.1 84 77.4
Migut.M00413 Erythranthe guttata HOM05D006996 ORTHO05D008961 7.2e-34 147.1 85 80.0
AUR62000730 Chenopodium quinoa HOM05D006996 ORTHO05D008961 1.2e-33 146.4 83 84.3
Glyma.12G194300 Glycine max HOM05D006996 ORTHO05D008961 1.2e-33 146.4 79 81.0
vmacro09127 Vaccinium macrocarpon HOM05D006996 ORTHO05D008961 2.7e-33 145.2 84 77.4
AUR62021549 Chenopodium quinoa HOM05D006996 ORTHO05D008961 3.5e-33 144.8 83 83.1
unitig_21.g20728 Utricularia gibba HOM05D006996 ORTHO05D008961 1.3e-32 142.9 87 71.3
Glyma.13G308300 Glycine max HOM05D006996 ORTHO05D008961 8.7e-32 140.2 79 78.5
Lj3g0015321 Lotus japonicus HOM05D006996 ORTHO05D008961 1.1e-31 139.8 75 81.3
Phvul.005G114700 Phaseolus vulgaris HOM05D006996 ORTHO05D008961 1.1e-31 139.8 87 72.4
AUR62008544 Chenopodium quinoa HOM05D006996 ORTHO05D008961 2.2e-30 135.6 83 78.3
SalBow7G3715 Salvia bowleyana HOM05D006996 ORTHO05D008961 1.4e-29 132.9 79 74.7
DCAR_014473 Daucus carota HOM05D006996 ORTHO05D008961 1.2e-28 129.8 61 91.8
Lalb_Chr14g0375741 Lupinus albus HOM05D006996 ORTHO05D008961 3.4e-28 128.3 75 73.3
CSS0029979 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 1.0e-27 126.7 65 83.1
TAR627G0363 Trochodendron aralioides HOM05D006996 ORTHO05D008961 2.2e-27 125.6 61 88.5
Sc12g0002320 Simmondsia chinensis HOM05D006996 ORTHO05D008961 1.4e-26 122.9 61 85.2
Lsat_1_v5_gn_4_184120 Lactuca sativa HOM05D006996 ORTHO05D008961 2.5e-26 122.1 61 85.2
Psat5g264240 Pisum sativum HOM05D006996 ORTHO05D008961 3.7e-22 108.2 60 78.3
COL.COLO4_06384 Corchorus olitorius HOM05D006996 ORTHO05D008961 2.2e-19 99.0 50 86.0
TAR676G0001 Trochodendron aralioides HOM05D006996 ORTHO05D008961 1.1e-18 96.7 53 77.4
Mapoly0024s0016 Marchantia polymorpha HOM05D006996 ORTHO05D008961 5.5e-18 94.4 70 57.1
SEGI_13346 Sequoiadendron giganteum HOM05D006996 ORTHO05D008961 8.8e-16 87.0 63 61.9
MCO13G082 Micromonas commoda HOM05D006996 ORTHO05D008961 1.1e-13 80.1 58 60.3
CSS0002917 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 3.8e-11 71.6 37 83.8
FAN09G4817 Fragaria x ananassa HOM05D006996 ORTHO05D008961 1.5e-10 69.7 34 88.2
CSS0018135 Camellia sinensis var. sinensis HOM05D006996 ORTHO05D008961 4.2e-10 68.2 37 78.4
BcaB01g06120 Brassica carinata HOM05D006996 ORTHO05D008961 1.1e-07 60.1 38 76.3
TPR.G35081 Trifolium pratense HOM05D006996 ORTHO05D048925 8.2e-06 53.9 37 64.9


User provided reference genes

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