Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2103 Papaver somniferum HOM05D006259 ORTHO05D007804 1.6e-219 765.8 388 100.0
PSO675G6900 Papaver somniferum HOM05D006259 ORTHO05D007804 1.1e-194 683.3 387 91.5
Aqoxy1G02333 Aquilegia oxysepala HOM05D006259 ORTHO05D007804 7.8e-105 384.8 352 59.9
TAR629G2204 Trochodendron aralioides HOM05D006259 ORTHO05D007804 1.1e-98 364.4 283 66.1
GSVIVG01014295001 Vitis vinifera HOM05D006259 ORTHO05D007804 1.9e-98 363.6 350 57.7
Haze_09453 Corylus avellana HOM05D006259 ORTHO05D007804 1.2e-97 360.9 365 56.2
Manes.15G089200 Manihot esculenta HOM05D006259 ORTHO05D007804 1.6e-97 360.5 362 55.2
FAN25G1146 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.7e-97 359.8 348 56.9
Sabra11G0101700 Salix brachista HOM05D006259 ORTHO05D007804 2.7e-97 359.8 366 55.7
MD11G1252500 Malus domestica HOM05D006259 ORTHO05D007804 1.7e-96 357.1 351 57.3
RcHm_v2.0_Chr5g0032751 Rosa chinensis HOM05D006259 ORTHO05D007804 5.1e-96 355.5 356 55.3
Cfa020561 Carpinus fangiana HOM05D006259 ORTHO05D007804 6.6e-96 355.1 307 61.6
Prupe.4G176500 Prunus persica HOM05D006259 ORTHO05D007804 1.1e-95 354.4 295 63.1
FAN16G3026 Fragaria x ananassa HOM05D006259 ORTHO05D007804 1.5e-95 354.0 352 56.5
QL08p022713 Quercus lobata HOM05D006259 ORTHO05D007804 2.5e-95 353.2 291 61.9
Dinv20198 Davidia involucrata HOM05D006259 ORTHO05D007804 3.3e-95 352.8 272 66.9
FvH4_3g19490 Fragaria vesca HOM05D006259 ORTHO05D007804 4.3e-95 352.4 350 55.4
vmacro11886 Vaccinium macrocarpon HOM05D006259 ORTHO05D007804 9.6e-95 351.3 370 53.5
TWI39G0898 Tripterygium wilfordii HOM05D006259 ORTHO05D007804 3.6e-94 349.4 306 60.5
CSS0047678 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 8.1e-94 348.2 370 52.2
Cc05_g11780 Coffea canephora HOM05D006259 ORTHO05D007804 8.1e-94 348.2 383 54.0
CSS0047365 Camellia sinensis var. sinensis HOM05D006259 ORTHO05D007804 1.4e-93 347.4 370 52.2
Lj8A154G76 Lonicera japonica HOM05D006259 ORTHO05D007804 2.4e-93 346.7 391 51.4
CANSAT56G1257 Cannabis sativa HOM05D006259 ORTHO05D007804 4.0e-93 345.9 306 62.1
ClCG11G017880 Citrullus lanatus HOM05D006259 ORTHO05D007804 4.0e-93 345.9 316 57.9
CiPaw.11G171900 Carya illinoinensis HOM05D006259 ORTHO05D007804 2.0e-92 343.6 357 53.5
MSTRG.15241 Avicennia marina HOM05D006259 ORTHO05D007804 4.5e-92 342.4 372 51.6
Nitab4.5_0002330g0080 Nicotiana tabacum HOM05D006259 ORTHO05D007804 5.8e-92 342.0 376 52.7
Ciclev10008595m.g Citrus clementina HOM05D006259 ORTHO05D007804 9.9e-92 341.3 320 59.1
Sed0019446 Sechium edule HOM05D006259 ORTHO05D007804 1.7e-91 340.5 306 59.2
Sopen07g031120 Solanum pennellii HOM05D006259 ORTHO05D007804 1.7e-91 340.5 370 54.3
FAN11G4033 Fragaria x ananassa HOM05D006259 ORTHO05D007804 2.2e-91 340.1 350 54.6
Potri.011G116100 Populus trichocarpa HOM05D006259 ORTHO05D007804 2.2e-91 340.1 376 51.9
Glyma.06G237700 Glycine max HOM05D006259 ORTHO05D007804 4.2e-90 335.9 309 58.3
Nitab4.5_0005017g0010 Nicotiana tabacum HOM05D006259 ORTHO05D007804 5.4e-90 335.5 382 50.8
Cpa.g.sc622.1 Carica papaya HOM05D006259 ORTHO05D007804 2.7e-89 333.2 292 62.7
Solyc07g062930.3 Solanum lycopersicum HOM05D006259 ORTHO05D007804 4.6e-89 332.4 370 54.1
Peaxi162Scf00069g01731 Petunia axillaris HOM05D006259 ORTHO05D007804 1.0e-88 331.3 294 59.5
Ciclev10010717m.g Citrus clementina HOM05D006259 ORTHO05D007804 1.3e-88 330.9 287 61.3
Migut.M00783 Erythranthe guttata HOM05D006259 ORTHO05D007804 1.3e-88 330.9 375 49.9
Phvul.011G163100 Phaseolus vulgaris HOM05D006259 ORTHO05D007804 1.8e-88 330.5 310 56.1
PGR083G2616 Punica granatum HOM05D006259 ORTHO05D007804 3.0e-88 329.7 331 55.0
Gorai.009G375900 Gossypium raimondii HOM05D006259 ORTHO05D007804 6.7e-88 328.6 358 54.2
CsaV3_4G033510 Cucumis sativus L. HOM05D006259 ORTHO05D007804 1.5e-87 327.4 304 57.2
HanXRQChr11g0351981 Helianthus annuus HOM05D006259 ORTHO05D007804 1.5e-87 327.4 372 52.4
SGA_v2.0_scaffold73G24236 Striga asiatica HOM05D006259 ORTHO05D007804 1.9e-87 327.0 374 50.0
MELO3C025605.2 Cucumis melo HOM05D006259 ORTHO05D007804 4.3e-87 325.9 354 52.5
Lsat_1_v5_gn_7_104661 Lactuca sativa HOM05D006259 ORTHO05D007804 5.6e-87 325.5 367 52.6
VMungo1127G0077 Vigna mungo HOM05D006259 ORTHO05D007804 9.6e-87 324.7 312 55.4
Duzib268G0576 Durio zibethinus HOM05D006259 ORTHO05D007804 2.8e-86 323.2 358 54.2
THA.LOC104811875 Tarenaya hassleriana HOM05D006259 ORTHO05D007804 6.2e-86 322.0 287 59.6
Sc16g0007160 Simmondsia chinensis HOM05D006259 ORTHO05D007804 1.4e-85 320.9 284 58.8
Lalb_Chr19g0134121 Lupinus albus HOM05D006259 ORTHO05D007804 1.5e-84 317.4 328 54.9
ECA236G1201 Erigeron canadensis HOM05D006259 ORTHO05D007804 2.0e-84 317.0 378 50.5
BcaB05g22091 Brassica carinata HOM05D006259 ORTHO05D007804 5.8e-84 315.5 305 56.1
DCAR_017124 Daucus carota HOM05D006259 ORTHO05D007804 1.3e-83 314.3 322 55.0
EL10Ac4g08228 Beta vulgaris HOM05D006259 ORTHO05D007804 1.7e-83 313.9 361 51.2
Ah.04g164700 Amaranthus hybridus HOM05D006259 ORTHO05D007804 2.9e-83 313.2 372 51.1
TPR.G32110 Trifolium pratense HOM05D006259 ORTHO05D007804 3.8e-83 312.8 290 57.6
ATR0150G016 Amborella trichopoda HOM05D006259 ORTHO05D007804 4.9e-83 312.4 357 51.5
A02p10700 Brassica napus HOM05D006259 ORTHO05D007804 3.2e-82 309.7 310 55.2
Rhsim06G0201700 Rhododendron simsii HOM05D006259 ORTHO05D007804 3.2e-82 309.7 296 55.7
Lj3g0016272 Lotus japonicus HOM05D006259 ORTHO05D007804 5.5e-82 308.9 308 55.5
Carub.0008s1423 Capsella rubella HOM05D006259 ORTHO05D007804 7.1e-82 308.5 348 50.9
Medtr8g058780 Medicago truncatula HOM05D006259 ORTHO05D007804 7.1e-82 308.5 295 55.6
Medtr8g061260 Medicago truncatula HOM05D006259 ORTHO05D007804 7.1e-82 308.5 295 55.6
AL8G29030 Arabidopsis lyrata HOM05D006259 ORTHO05D007804 9.3e-82 308.1 352 49.7
Eucgr.F01160 Eucalyptus grandis HOM05D006259 ORTHO05D007804 9.3e-82 308.1 255 61.2
Thecc.07G095600 Theobroma cacao HOM05D006259 ORTHO05D007804 9.3e-82 308.1 263 61.2
arahy.Tifrunner.gnm1.ann1.KCB6L6 Arachis hypogaea HOM05D006259 ORTHO05D007804 2.1e-81 307.0 329 53.8
Hund02234 Selenicereus undatus HOM05D006259 ORTHO05D007804 2.1e-81 307.0 297 55.2
AUR62019461 Chenopodium quinoa HOM05D006259 ORTHO05D007804 3.5e-81 306.2 375 49.9
Psat4g178120 Pisum sativum HOM05D006259 ORTHO05D007804 4.6e-81 305.8 288 55.2
arahy.Tifrunner.gnm1.ann1.J8ZMQ9 Arachis hypogaea HOM05D006259 ORTHO05D007804 7.9e-81 305.1 341 52.2
Duzib244G0007 Durio zibethinus HOM05D006259 ORTHO05D007804 1.3e-80 304.3 358 53.1
BcaC03g14368 Brassica carinata HOM05D006259 ORTHO05D007804 1.8e-80 303.9 331 51.4
Sp6g16000 Schrenkiella parvula HOM05D006259 ORTHO05D007804 5.1e-80 302.4 329 51.7
CARHR267060 Cardamine hirsuta HOM05D006259 ORTHO05D007804 8.7e-80 301.6 310 53.2
Thhalv10015851m.g Eutrema salsugineum HOM05D006259 ORTHO05D007804 8.7e-80 301.6 319 52.7
BraA02t06133Z Brassica rapa HOM05D006259 ORTHO05D007804 3.3e-79 299.7 318 53.8
AT5G53920 Arabidopsis thaliana HOM05D006259 ORTHO05D007804 5.7e-79 298.9 351 49.0
FAN21G1610 Fragaria x ananassa HOM05D006259 ORTHO05D007804 9.6e-79 298.1 353 51.0
C02p17820 Brassica napus HOM05D006259 ORTHO05D007804 3.7e-78 296.2 344 49.7
unitig_46.g18320 Utricularia gibba HOM05D006259 ORTHO05D007804 4.8e-78 295.8 376 47.3
BolC2t07911H Brassica oleracea HOM05D006259 ORTHO05D007804 6.2e-78 295.4 346 49.4
HPP92_017550 Vanilla planifolia HOM05D006259 ORTHO05D007804 6.2e-78 295.4 281 54.4
CAN.G162.38 Capsicum annuum HOM05D006259 ORTHO05D007804 1.1e-77 294.7 272 57.4
CDE05G3386 Ceratophyllum demersum HOM05D006259 ORTHO05D007804 1.1e-77 294.7 273 58.2
Nn1g06450 Nelumbo nucifera HOM05D006259 ORTHO05D007804 3.2e-74 283.1 315 52.1
Aa31LG3G10030 Aethionema arabicum HOM05D006259 ORTHO05D007804 1.6e-73 280.8 316 50.6
Os05g0497675 Oryza sativa ssp. japonica HOM05D006259 ORTHO05D007804 1.0e-72 278.1 305 49.8
Oeu025362.1 Olea europaea HOM05D006259 ORTHO05D007804 1.3e-70 271.2 368 46.2
arahy.Tifrunner.gnm1.ann1.JJTS0M Arachis hypogaea HOM05D006259 ORTHO05D007804 1.2e-68 264.6 223 62.8
arahy.Tifrunner.gnm1.ann1.IZH9YM Arachis hypogaea HOM05D006259 ORTHO05D007804 3.4e-68 263.1 223 61.9
Gohir.A04G035300 Gossypium hirsutum HOM05D006259 ORTHO05D007804 2.9e-67 260.0 358 47.2
Atru.chr2.2422 Acer truncatum HOM05D006259 ORTHO05D007804 9.4e-66 255.0 207 64.3
Mapoly0161s0032 Marchantia polymorpha HOM05D006259 ORTHO05D007804 7.9e-65 251.9 298 46.3
Gohir.D05G348100 Gossypium hirsutum HOM05D006259 ORTHO05D007804 1.1e-63 248.1 214 62.1
Pp3c22_15620 Physcomitrium patens HOM05D006259 ORTHO05D007804 2.8e-62 243.4 318 44.0
AagrBONN_evm.TU.Sc2ySwM_362.1898 Anthoceros agrestis HOM05D006259 ORTHO05D007804 5.1e-56 222.6 294 41.2
AUR62036169 Chenopodium quinoa HOM05D006259 ORTHO05D007804 8.5e-51 205.3 198 54.0
SMO230G0105 Selaginella moellendorffii HOM05D006259 ORTHO05D007804 6.1e-49 199.1 203 50.7
Hma1.2p1_1411F.1_g281740 Hydrangea macrophylla HOM05D006259 ORTHO05D007804 9.7e-47 191.8 170 58.8
Zm00001eb352610 Zea mays HOM05D006259 ORTHO05D007804 5.0e-43 179.5 201 46.8
Thecc.02G165400 Theobroma cacao HOM05D006259 ORTHO05D007804 3.4e-39 166.8 125 67.2
Cre09.g396735 Chlamydomonas reinhardtii HOM05D006259 ORTHO05D007804 7.5e-39 165.6 300 36.0
Actinidia09701 Actinidia chinensis HOM05D006259 ORTHO05D007804 3.1e-37 160.2 147 57.1
MCO08G332 Micromonas commoda HOM05D006259 ORTHO05D007804 1.7e-35 154.5 278 36.7
arahy.Tifrunner.gnm1.ann1.Y39XKR Arachis hypogaea HOM05D006259 ORTHO05D007804 1.9e-34 151.0 161 52.2
COL.COLO4_36712 Corchorus olitorius HOM05D006259 ORTHO05D007804 3.2e-34 150.2 246 41.1
PRCOL_00006646 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.6e-33 147.9 229 38.0
COL.COLO4_00923 Corchorus olitorius HOM05D006259 ORTHO05D007804 1.5e-31 141.4 245 35.1
PRCOL_00002790 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 1.3e-30 138.3 220 37.3
arahy.Tifrunner.gnm1.ann1.N67PK3 Arachis hypogaea HOM05D006259 ORTHO05D007804 9.5e-26 122.1 254 34.6
arahy.Tifrunner.gnm1.ann1.UFBT31 Arachis hypogaea HOM05D006259 ORTHO05D007804 4.7e-25 119.8 241 36.5
MBI18_g48079_MAGBIO Magnolia biondii HOM05D006259 ORTHO05D007804 4.7e-25 119.8 117 59.0
arahy.Tifrunner.gnm1.ann1.NGC2LD Arachis hypogaea HOM05D006259 ORTHO05D007804 4.0e-24 116.7 237 38.0
arahy.Tifrunner.gnm1.ann1.88153A Arachis hypogaea HOM05D006259 ORTHO05D007804 3.7e-22 110.2 241 34.9
arahy.Tifrunner.gnm1.ann1.SB88KA Arachis hypogaea HOM05D006259 ORTHO05D007804 9.2e-21 105.5 256 31.6
Duzib213G0106 Durio zibethinus HOM05D006259 ORTHO05D007804 5.9e-20 102.8 102 52.9
PRCOL_00002336 Prasinoderma coloniale HOM05D006259 ORTHO05D007804 7.8e-20 102.4 206 32.0
arahy.Tifrunner.gnm1.ann1.LRZU8J Arachis hypogaea HOM05D006259 ORTHO05D007804 1.5e-18 98.2 117 47.0
arahy.Tifrunner.gnm1.ann1.5V52A0 Arachis hypogaea HOM05D006259 ORTHO05D007804 5.6e-18 96.3 120 47.5
arahy.Tifrunner.gnm1.ann1.H7I8JY Arachis hypogaea HOM05D006259 ORTHO05D007804 8.0e-17 92.4 124 45.2
HPP92_017577 Vanilla planifolia HOM05D006259 ORTHO05D007804 2.2e-14 84.3 135 37.8
Atru.chr2.2423 Acer truncatum HOM05D006259 ORTHO05D007804 2.3e-08 64.3 131 35.9
Actinidia09700 Actinidia chinensis HOM05D006259 ORTHO05D053169 3.7e-06 57.0 60 46.7


User provided reference genes

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