Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2080 Papaver somniferum HOM05D007692 ORTHO05D009696 6.7e-54 213.8 108 100.0
PSO675G1902 Papaver somniferum HOM05D007692 ORTHO05D009696 1.5e-50 202.6 108 95.4
TAR624G0897 Trochodendron aralioides HOM05D007692 ORTHO05D009696 6.7e-30 134.0 105 64.8
Nn2g12400 Nelumbo nucifera HOM05D007692 ORTHO05D009696 4.8e-28 127.9 100 66.0
Prupe.1G403900 Prunus persica HOM05D007692 ORTHO05D009696 3.4e-26 121.7 100 61.0
FvH4_2g30960 Fragaria vesca HOM05D007692 ORTHO05D009696 4.5e-26 121.3 99 64.6
MD08G1071600 Malus domestica HOM05D007692 ORTHO05D009696 5.9e-26 120.9 100 59.0
MD15G1049600 Malus domestica HOM05D007692 ORTHO05D009696 5.9e-26 120.9 100 61.0
QL02p017055 Quercus lobata HOM05D007692 ORTHO05D009696 5.9e-26 120.9 100 61.0
QL02p017043 Quercus lobata HOM05D007692 ORTHO05D009696 2.2e-25 119.0 97 61.9
RcHm_v2.0_Chr6g0311901 Rosa chinensis HOM05D007692 ORTHO05D009696 2.2e-25 119.0 100 62.0
Sabra06G0170400 Salix brachista HOM05D007692 ORTHO05D009696 6.5e-25 117.5 100 63.0
Haze_18297 Corylus avellana HOM05D007692 ORTHO05D009696 2.5e-24 115.5 103 58.3
Aqoxy2G03896 Aquilegia oxysepala HOM05D007692 ORTHO05D009696 1.6e-23 112.8 106 56.6
arahy.Tifrunner.gnm1.ann1.0E4SK3 Arachis hypogaea HOM05D007692 ORTHO05D009696 1.6e-23 112.8 100 59.0
Potri.006G220500 Populus trichocarpa HOM05D007692 ORTHO05D009696 2.7e-23 112.1 100 59.0
Eucgr.C00729 Eucalyptus grandis HOM05D007692 ORTHO05D009696 4.7e-23 111.3 98 57.1
MBI13_g42817_MAGBIO Magnolia biondii HOM05D007692 ORTHO05D009696 4.7e-23 111.3 105 54.3
Nn8g39911 Nelumbo nucifera HOM05D007692 ORTHO05D009696 4.7e-23 111.3 107 58.9
MELO3C016914.2 Cucumis melo HOM05D007692 ORTHO05D009696 6.1e-23 110.9 101 54.5
CsaV3_4G036060 Cucumis sativus L. HOM05D007692 ORTHO05D009696 1.0e-22 110.2 101 54.5
COL.COLO4_21142 Corchorus olitorius HOM05D007692 ORTHO05D009696 2.3e-22 109.0 103 55.3
Duzib168G1711 Durio zibethinus HOM05D007692 ORTHO05D009696 3.9e-22 108.2 99 57.6
Manes.16G085800 Manihot esculenta HOM05D007692 ORTHO05D009696 5.1e-22 107.8 99 56.6
HPP92_004156 Vanilla planifolia HOM05D007692 ORTHO05D009696 6.7e-22 107.5 101 53.5
Thecc.09G063700 Theobroma cacao HOM05D007692 ORTHO05D009696 8.8e-22 107.1 99 56.6
CiPaw.15G091700 Carya illinoinensis HOM05D007692 ORTHO05D009696 1.1e-21 106.7 98 55.1
ClCG05G015760 Citrullus lanatus HOM05D007692 ORTHO05D009696 1.1e-21 106.7 101 55.4
CAN.G567.82 Capsicum annuum HOM05D007692 ORTHO05D009696 2.0e-21 105.9 98 54.1
PGR031G0311 Punica granatum HOM05D007692 ORTHO05D009696 2.0e-21 105.9 93 58.1
Solyc08g061640.1 Solanum lycopersicum HOM05D007692 ORTHO05D009696 3.3e-21 105.1 103 51.5
Sopen08g017100 Solanum pennellii HOM05D007692 ORTHO05D009696 3.3e-21 105.1 103 51.5
PGSC0003DMG400045083 Solanum tuberosum HOM05D007692 ORTHO05D009696 3.3e-21 105.1 103 51.5
Nitab4.5_0008422g0010 Nicotiana tabacum HOM05D007692 ORTHO05D009696 7.4e-21 104.0 103 50.5
Peaxi162Scf00486g00102 Petunia axillaris HOM05D007692 ORTHO05D009696 9.7e-21 103.6 102 52.0
VMungo0647G2522 Vigna mungo HOM05D007692 ORTHO05D009696 9.7e-21 103.6 100 56.0
Medtr1g015470 Medicago truncatula HOM05D007692 ORTHO05D009696 1.7e-20 102.8 100 56.0
Cfa017868 Carpinus fangiana HOM05D007692 ORTHO05D009696 2.2e-20 102.4 100 55.0
TWI63G1278 Tripterygium wilfordii HOM05D007692 ORTHO05D009696 2.2e-20 102.4 104 52.9
Nitab4.5_0000446g0120 Nicotiana tabacum HOM05D007692 ORTHO05D009696 2.8e-20 102.1 103 50.5
TPR.G38893 Trifolium pratense HOM05D007692 ORTHO05D009696 2.8e-20 102.1 100 57.0
CANSAT25G1329 Cannabis sativa HOM05D007692 ORTHO05D009696 3.7e-20 101.7 99 53.5
Glyma.17G225900 Glycine max HOM05D007692 ORTHO05D009696 4.8e-20 101.3 100 54.0
Dinv22937 Davidia involucrata HOM05D007692 ORTHO05D009696 1.4e-19 99.8 103 54.4
Gohir.D05G040100 Gossypium hirsutum HOM05D007692 ORTHO05D009696 1.4e-19 99.8 97 54.6
Gorai.009G040500 Gossypium raimondii HOM05D007692 ORTHO05D009696 1.4e-19 99.8 97 54.6
DCAR_001232 Daucus carota HOM05D006390 ORTHO05D007899 2.4e-19 99.0 100 55.0
Gohir.A05G038600 Gossypium hirsutum HOM05D007692 ORTHO05D009696 2.4e-19 99.0 97 54.6
ATR0598G206 Amborella trichopoda HOM05D007692 ORTHO05D009696 3.1e-19 98.6 106 50.9
Lj5g0021751 Lotus japonicus HOM05D007692 ORTHO05D009696 3.1e-19 98.6 100 53.0
Oeu003971.1 Olea europaea HOM05D007692 ORTHO05D009696 3.1e-19 98.6 97 55.7
EL10Ac2g03778 Beta vulgaris HOM05D007692 ORTHO05D009696 5.3e-19 97.8 98 50.0
Psat6g022960 Pisum sativum HOM05D007692 ORTHO05D009696 6.9e-19 97.4 100 53.0
SGA_v2.0_scaffold20G09157 Striga asiatica HOM05D006390 ORTHO05D007899 6.9e-19 97.4 99 45.5
SalBow4G0926 Salvia bowleyana HOM05D007692 ORTHO05D009696 9.1e-19 97.1 103 47.6
Hma1.2p1_0278F.1_g111850 Hydrangea macrophylla HOM05D007692 ORTHO05D009696 1.2e-18 96.7 98 53.1
Glyma.06G056100 Glycine max HOM05D007692 ORTHO05D009696 2.6e-18 95.5 100 53.0
Sed0007061 Sechium edule HOM05D007692 ORTHO05D009696 2.6e-18 95.5 101 49.5
THA.LOC104810956 Tarenaya hassleriana HOM05D007692 ORTHO05D009696 2.6e-18 95.5 103 48.5
Cpa.g.sc126.21 Carica papaya HOM05D007692 ORTHO05D009696 2.2e-17 92.4 100 53.0
CDE04G2134 Ceratophyllum demersum HOM05D007692 ORTHO05D009696 2.2e-17 92.4 108 44.4
ECA240G2866 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-17 92.4 100 50.0
Ah.11g044290 Amaranthus hybridus HOM05D007692 ORTHO05D009696 2.9e-17 92.0 98 53.1
Lsat_1_v5_gn_7_58320 Lactuca sativa HOM05D006390 ORTHO05D007899 5.0e-17 91.3 97 52.6
TPR.G3568 Trifolium pratense HOM05D007692 ORTHO05D009696 5.0e-17 91.3 98 49.0
Ciclev10010178m.g Citrus clementina HOM05D007692 ORTHO05D009696 1.9e-16 89.4 104 51.0
Phvul.009G082200 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 1.9e-16 89.4 100 51.0
A10p18810 Brassica napus HOM05D007692 ORTHO05D009696 2.5e-16 89.0 100 48.0
C09p54830 Brassica napus HOM05D007692 ORTHO05D009696 2.5e-16 89.0 100 48.0
BolC9t58343H Brassica oleracea HOM05D007692 ORTHO05D009696 2.5e-16 89.0 100 48.0
BraA10t43961Z Brassica rapa HOM05D007692 ORTHO05D009696 2.5e-16 89.0 100 48.0
BcaB08g36470 Brassica carinata HOM05D007692 ORTHO05D009696 4.2e-16 88.2 100 48.0
Sc06g0001120 Simmondsia chinensis HOM05D007692 ORTHO05D009696 4.2e-16 88.2 104 46.2
VMungo1309G1304 Vigna mungo HOM05D007692 ORTHO05D009696 9.4e-16 87.0 100 50.0
Zm00001eb005780 Zea mays HOM05D007692 ORTHO05D009696 1.2e-15 86.7 103 45.6
Thhalv10015977m.g Eutrema salsugineum HOM05D007692 ORTHO05D009696 2.1e-15 85.9 108 45.4
Medtr3g105090 Medicago truncatula HOM05D007692 ORTHO05D009696 2.1e-15 85.9 97 46.4
Os03g0176900 Oryza sativa ssp. japonica HOM05D007692 ORTHO05D009696 3.6e-15 85.1 104 44.2
unitig_32.g11527 Utricularia gibba HOM05D007692 ORTHO05D009696 4.7e-15 84.7 97 46.4
CSS0041722 Camellia sinensis var. sinensis HOM05D007692 ORTHO05D009696 8.0e-15 84.0 87 51.7
Phvul.001G038600 Phaseolus vulgaris HOM05D007692 ORTHO05D009696 3.0e-14 82.0 84 52.4
CARHR191630 Cardamine hirsuta HOM05D007692 ORTHO05D009696 8.8e-14 80.5 98 44.9
Cc08_g01120 Coffea canephora HOM05D007692 ORTHO05D009696 8.8e-14 80.5 104 45.2
HanXRQChr03g0065641 Helianthus annuus HOM05D007692 ORTHO05D009696 8.8e-14 80.5 104 45.2
Psat5g030520 Pisum sativum HOM05D007692 ORTHO05D009696 1.3e-12 76.6 78 50.0
TAR624G1426 Trochodendron aralioides HOM05D000001 ORTHO05D000003 2.2e-12 75.9 69 56.5
Sp6g23280 Schrenkiella parvula HOM05D007692 ORTHO05D009696 2.8e-12 75.5 97 44.3
Medtr1g015490 Medicago truncatula HOM05D007692 ORTHO05D009696 3.7e-12 75.1 96 49.0
Lalb_Chr11g0063341 Lupinus albus HOM05D007692 ORTHO05D009696 4.8e-12 74.7 100 45.0
AT5G21910 Arabidopsis thaliana HOM05D007692 ORTHO05D009696 7.0e-11 70.9 99 41.4
Carub.0006s1955 Capsella rubella HOM05D007692 ORTHO05D009696 1.2e-10 70.1 99 41.4
Lj1g0020593 Lotus japonicus HOM05D007692 ORTHO05D009696 4.5e-10 68.2 101 44.6
Psat6g004480 Pisum sativum HOM05D007692 ORTHO05D009696 1.0e-09 67.0 74 45.9
Carub.0005s0963 Capsella rubella HOM05D007692 ORTHO05D009696 1.3e-09 66.6 96 40.6
Duzib150G0238 Durio zibethinus HOM05D007692 ORTHO05D009696 3.8e-09 65.1 137 38.0
Ciclev10026763m.g Citrus clementina HOM05D008318 ORTHO05D010481 2.5e-08 62.4 116 35.3
Lalb_Chr14g0366461 Lupinus albus HOM05D007692 ORTHO05D009696 7.2e-08 60.8 67 52.2
Cfa003529 Carpinus fangiana HOM05D008318 ORTHO05D010481 3.0e-06 55.5 112 35.7
Atru.chr7.1844 Acer truncatum HOM05D007692 ORTHO05D009696 4.0e-06 55.1 67 43.3
Eucgr.J02810 Eucalyptus grandis HOM05D008318 ORTHO05D010481 8.8e-06 53.9 111 35.1


User provided reference genes

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