Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2002 Papaver somniferum HOM05D000002 ORTHO05D000001 1.1e-114 416.8 221 100.0
TAR650G0001 Trochodendron aralioides HOM05D000067 ORTHO05D000001 3.7e-19 99.4 233 33.0
Solyc10g038180.3 Solanum lycopersicum HOM05D000002 ORTHO05D000001 8.9e-13 78.2 209 29.2
GSVIVG01036343001 Vitis vinifera HOM05D000067 ORTHO05D000097 8.9e-13 78.2 118 35.6
RcHm_v2.0_Chr3g0465981 Rosa chinensis HOM05D000002 ORTHO05D000001 1.5e-12 77.4 215 31.6
Migut.D01554 Erythranthe guttata HOM05D000002 ORTHO05D000001 2.0e-12 77.0 111 41.4
RcHm_v2.0_Chr2g0129181 Rosa chinensis HOM05D000002 ORTHO05D000001 4.4e-12 75.9 219 30.1
Solyc05g015654.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 4.4e-12 75.9 209 28.7
TAR549G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 5.8e-12 75.5 126 36.5
Migut.G00019 Erythranthe guttata HOM05D000002 ORTHO05D000001 7.6e-12 75.1 111 38.7
GSVIVG01016108001 Vitis vinifera HOM05D000002 ORTHO05D000001 7.6e-12 75.1 109 38.5
TAR042G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.9e-11 73.2 253 26.9
CANSAT21G1279 Cannabis sativa HOM05D000002 ORTHO05D000001 6.4e-11 72.0 116 37.1
CANSAT78G1493 Cannabis sativa HOM05D000002 ORTHO05D000001 6.4e-11 72.0 110 36.4
Sopen01g025080 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-11 71.6 209 27.8
Sopen02g037750 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-11 71.6 209 27.8
Sopen07g006410 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-11 71.6 209 27.8
Sopen07g029680 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-11 71.6 209 27.8
Sopen07g031580 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-11 71.6 209 27.8
Sopen08g004430 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-11 71.6 209 27.8
Sopen10g024730 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-11 71.6 209 27.8
Sopen12g022570 Solanum pennellii HOM05D000002 ORTHO05D000001 8.4e-11 71.6 209 27.8
TAR218G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.4e-11 71.6 110 40.9
Ciclev10013318m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.4e-10 70.9 112 38.4
Solyc06g082797.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 1.4e-10 70.9 209 28.2
QL08p052300 Quercus lobata HOM05D000002 ORTHO05D000001 1.9e-10 70.5 110 34.5
Sabra15G0028100 Salix brachista HOM05D000002 ORTHO05D000001 1.9e-10 70.5 255 28.6
Sabra06G0056900 Salix brachista HOM05D000002 ORTHO05D000001 3.2e-10 69.7 193 30.6
Atru.chr2.3036 Acer truncatum HOM05D000002 ORTHO05D000001 7.1e-10 68.6 113 37.2
Sopen08g012970 Solanum pennellii HOM05D000002 ORTHO05D000001 7.1e-10 68.6 209 26.8
Nitab4.5_0000305g0090 Nicotiana tabacum HOM05D002833 ORTHO05D000001 1.2e-09 67.8 115 38.3
Rhsim05G0076500 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-09 67.8 113 40.7
Actinidia35992 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.1e-09 67.0 110 33.6
TAR099G0005 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-09 67.0 219 27.4
TAR301G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.1e-09 67.0 100 38.0
Sabra18G0120700 Salix brachista HOM05D000002 ORTHO05D000001 2.7e-09 66.6 226 29.2
Sopen07g003750 Solanum pennellii HOM05D000002 ORTHO05D000001 2.7e-09 66.6 111 32.4
TAR541G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.7e-09 66.6 110 36.4
Migut.F01590 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.5e-09 66.2 138 32.6
Migut.H01198 Erythranthe guttata HOM05D000002 ORTHO05D000001 3.5e-09 66.2 138 32.6
Rhsim05G0196600 Rhododendron simsii HOM05D000002 ORTHO05D000001 3.5e-09 66.2 112 34.8
TPR.G7779 Trifolium pratense HOM05D000002 ORTHO05D000001 3.5e-09 66.2 145 33.8
Gorai.008G092500 Gossypium raimondii HOM05D000002 ORTHO05D000001 4.6e-09 65.9 103 36.9
MD02G1010600 Malus domestica HOM05D000002 ORTHO05D000001 6.0e-09 65.5 108 38.9
Solyc05g050070.1 Solanum lycopersicum HOM05D000002 ORTHO05D000001 6.0e-09 65.5 202 26.2
CSS0020834 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.8e-09 65.1 195 28.7
MD15G1119400 Malus domestica HOM05D000056 ORTHO05D000001 7.8e-09 65.1 106 40.6
PSO832G1651 Papaver somniferum HOM05D000002 ORTHO05D000001 1.0e-08 64.7 117 33.3
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 1.0e-08 64.7 188 28.2
Ciclev10024253m.g Citrus clementina HOM05D000002 ORTHO05D000001 1.3e-08 64.3 110 36.4
Migut.K01257 Erythranthe guttata HOM05D000002 ORTHO05D000001 1.3e-08 64.3 100 38.0
MD17G1248200 Malus domestica HOM05D000002 ORTHO05D000001 1.7e-08 63.9 110 37.3
SGA_v2.0_scaffold2G01302 Striga asiatica HOM05D000033 ORTHO05D001614 1.7e-08 63.9 136 31.6
Actinidia04430 Actinidia chinensis HOM05D000002 ORTHO05D000001 2.3e-08 63.5 110 34.5
Lalb_Chr05g0226751 Lupinus albus HOM05D008404 ORTHO05D000001 2.3e-08 63.5 147 28.6
MD12G1231800 Malus domestica HOM05D000002 ORTHO05D000001 2.3e-08 63.5 111 34.2
Peaxi162Scf00031g00297 Petunia axillaris HOM05D010760 ORTHO05D003210 2.3e-08 63.5 87 42.5
Psat4g210200 Pisum sativum HOM05D018610 ORTHO05D000001 2.3e-08 63.5 106 35.8
RcHm_v2.0_Chr2g0124571 Rosa chinensis HOM05D000011 ORTHO05D000157 2.3e-08 63.5 112 34.8
RcHm_v2.0_Chr5g0032551 Rosa chinensis HOM05D000002 ORTHO05D000001 2.3e-08 63.5 112 34.8
TAR180G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.3e-08 63.5 111 35.1
Atru.chr11.277 Acer truncatum HOM05D000002 ORTHO05D000001 3.0e-08 63.2 197 25.9
Hma1.2p1_0611F.1_g188700 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.0e-08 63.2 215 27.9
Lalb_Chr06g0171641 Lupinus albus HOM05D000002 ORTHO05D000001 3.0e-08 63.2 117 31.6
MD14G1225200 Malus domestica HOM05D000002 ORTHO05D000001 3.0e-08 63.2 226 26.1
PSO541G4865 Papaver somniferum HOM05D000002 ORTHO05D000001 3.0e-08 63.2 111 37.8
Psat7g220520 Pisum sativum HOM05D000002 ORTHO05D000001 3.0e-08 63.2 112 32.1
Psat7g227320 Pisum sativum HOM05D000002 ORTHO05D000001 3.0e-08 63.2 112 31.2
Nn1g03750 Nelumbo nucifera HOM05D000002 ORTHO05D000001 3.9e-08 62.8 91 39.6
Nitab4.5_0000523g0100 Nicotiana tabacum HOM05D002833 ORTHO05D000001 3.9e-08 62.8 115 37.4
PSO066G0001 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-08 62.8 111 38.7
PSO832G0334 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-08 62.8 102 41.2
PSO832G3798 Papaver somniferum HOM05D000002 ORTHO05D000001 3.9e-08 62.8 115 40.0
CANSAT25G2785 Cannabis sativa HOM05D000002 ORTHO05D000001 5.1e-08 62.4 131 31.3
CAN.G1859.1 Capsicum annuum HOM05D001133 ORTHO05D000941 5.1e-08 62.4 81 43.2
Sabra13G0070400 Salix brachista HOM05D000002 ORTHO05D000001 5.1e-08 62.4 112 33.9
Peaxi162Scf01254g00010 Petunia axillaris HOM05D015337 ORTHO05D019322 6.6e-08 62.0 103 38.8
SEGI_13448 Sequoiadendron giganteum HOM05D000002 ORTHO05D000001 6.6e-08 62.0 224 29.5
Aqoxy5G02395 Aquilegia oxysepala HOM05D000002 ORTHO05D000001 8.6e-08 61.6 121 31.4
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.6e-08 61.6 112 33.9
Hma1.2p1_1307F.1_g274730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 8.6e-08 61.6 112 33.9
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 8.6e-08 61.6 87 41.4
Peaxi162Scf00460g00045 Petunia axillaris HOM05D002833 ORTHO05D000001 8.6e-08 61.6 118 35.6
Sabra12G0050000 Salix brachista HOM05D000002 ORTHO05D000001 8.6e-08 61.6 152 31.6
ECA233G6231 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-07 61.2 111 29.7
ECA234G0762 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-07 61.2 111 29.7
MD13G1099200 Malus domestica HOM05D000002 ORTHO05D000001 1.1e-07 61.2 221 27.1
Nitab4.5_0009589g0010 Nicotiana tabacum HOM05D010760 ORTHO05D003210 1.1e-07 61.2 86 43.0
CSS0020274 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-07 60.8 154 30.5
MD05G1333300 Malus domestica HOM05D000002 ORTHO05D000001 1.5e-07 60.8 138 33.3
Rhsim05G0062600 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.5e-07 60.8 121 33.9
Atru.chr11.281 Acer truncatum HOM05D000002 ORTHO05D000001 1.9e-07 60.5 100 35.0
CSS0041353 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-07 60.5 213 27.2
PSO339G0642 Papaver somniferum HOM05D000002 ORTHO05D000001 1.9e-07 60.5 110 36.4
Sabra01G0007200 Salix brachista HOM05D003064 ORTHO05D000001 1.9e-07 60.5 223 24.7
Sabra14G0114400 Salix brachista HOM05D000002 ORTHO05D000001 1.9e-07 60.5 152 30.9
TPR.G8161 Trifolium pratense HOM05D000002 ORTHO05D000001 1.9e-07 60.5 187 26.2
TWI63G0191 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.9e-07 60.5 111 30.6
MD12G1185900 Malus domestica HOM05D000002 ORTHO05D000001 2.5e-07 60.1 111 35.1
Nn7g37430 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.5e-07 60.1 94 37.2
Sopen10g016030 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-07 60.1 136 28.7
RcHm_v2.0_Chr5g0038991 Rosa chinensis HOM05D000002 ORTHO05D000001 3.3e-07 59.7 107 36.4
Atru.chr2.1455 Acer truncatum HOM05D000002 ORTHO05D000001 4.3e-07 59.3 112 33.0
CANSAT54G2325 Cannabis sativa HOM05D000002 ORTHO05D000001 4.3e-07 59.3 99 33.3
Hma1.2p1_0948F.1_g240460 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.3e-07 59.3 112 32.1
MD13G1050200 Malus domestica HOM05D000002 ORTHO05D000001 4.3e-07 59.3 110 33.6
Prupe.8G084200 Prunus persica HOM05D000002 ORTHO05D000001 4.3e-07 59.3 287 26.1
RcHm_v2.0_Chr7g0190501 Rosa chinensis HOM05D000002 ORTHO05D000001 4.3e-07 59.3 103 35.0
MD00G1084700 Malus domestica HOM05D000002 ORTHO05D000001 5.6e-07 58.9 116 33.6
Nitab4.5_0000164g0090 Nicotiana tabacum HOM05D002833 ORTHO05D003210 5.6e-07 58.9 124 34.7
Sopen09g024970 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-07 58.9 181 27.1
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.3e-07 58.5 108 38.0
Lj2C1206G8 Lonicera japonica HOM05D014274 ORTHO05D000001 7.3e-07 58.5 122 32.8
MD00G1024600 Malus domestica HOM05D000002 ORTHO05D000001 7.3e-07 58.5 141 33.3
PSO732G0478 Papaver somniferum HOM05D000002 ORTHO05D000001 7.3e-07 58.5 130 30.8
Sabra15G0130700 Salix brachista HOM05D000432 ORTHO05D000001 7.3e-07 58.5 130 34.6
TPR.G36567 Trifolium pratense HOM05D000002 ORTHO05D000001 7.3e-07 58.5 111 28.8
TAR084G0004 Trochodendron aralioides HOM05D001435 ORTHO05D001304 7.3e-07 58.5 204 27.5
CSS0011950 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.6e-07 58.2 118 36.4
Hma1.2p1_0951F.1_g240790 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 9.6e-07 58.2 100 30.0
MD11G1146000 Malus domestica HOM05D000002 ORTHO05D000001 9.6e-07 58.2 110 36.4
ECA236G4365 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-06 57.8 111 29.7
ECA248G2841 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-06 57.8 111 30.6
FvH4_2g23291 Fragaria vesca HOM05D000002 ORTHO05D000001 1.2e-06 57.8 111 34.2
HanXRQChr03g0078371 Helianthus annuus HOM05D000002 ORTHO05D000001 1.2e-06 57.8 110 28.2
Hma1.2p1_0445F.1_g154480 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-06 57.8 138 32.6
MD12G1175300 Malus domestica HOM05D000002 ORTHO05D000001 1.2e-06 57.8 110 35.5
Nitab4.5_0000871g0050 Nicotiana tabacum HOM05D002833 ORTHO05D003210 1.2e-06 57.8 115 34.8
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 1.2e-06 57.8 107 34.6
Sabra01G0140600 Salix brachista HOM05D000002 ORTHO05D000001 1.2e-06 57.8 111 28.8
SGA_v2.0_scaffold400G50849 Striga asiatica HOM05D000002 ORTHO05D000001 1.2e-06 57.8 107 34.6
TPR.G529 Trifolium pratense HOM05D007933 ORTHO05D000001 1.2e-06 57.8 114 28.1
Hma1.2p1_0602F.1_g187610 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-06 57.4 234 25.6
Hma1.2p1_1458F.1_g284730 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.6e-06 57.4 106 34.9
MD17G1115400 Malus domestica HOM05D000002 ORTHO05D000001 1.6e-06 57.4 110 36.4
PSO170G3169 Papaver somniferum HOM05D000002 ORTHO05D000001 1.6e-06 57.4 111 31.5
PSO478G4447 Papaver somniferum HOM05D000002 ORTHO05D000001 1.6e-06 57.4 115 38.3
Peaxi162Scf00019g00041 Petunia axillaris HOM05D002833 ORTHO05D000001 1.6e-06 57.4 115 33.9
Psat1g154000 Pisum sativum HOM05D000002 ORTHO05D000001 1.6e-06 57.4 112 29.5
Sabra05G0125000 Salix brachista HOM05D000002 ORTHO05D000001 1.6e-06 57.4 124 34.7
Sopen10g015910 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-06 57.4 106 33.0
Hma1.2p1_0240F.1_g100250 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-06 57.0 108 29.6
MD03G1056000 Malus domestica HOM05D000002 ORTHO05D000001 2.1e-06 57.0 110 33.6
Nitab4.5_0004147g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 2.1e-06 57.0 113 35.4
Sabra06G0154000 Salix brachista HOM05D000002 ORTHO05D000001 2.1e-06 57.0 129 31.8
Sabra16G0311100 Salix brachista HOM05D000002 ORTHO05D000001 2.1e-06 57.0 129 31.8
Sopen01g012520 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-06 57.0 110 32.7
TPR.G36530 Trifolium pratense HOM05D007933 ORTHO05D000001 2.1e-06 57.0 114 28.1
CANSAT35G1764 Cannabis sativa HOM05D007933 ORTHO05D000001 2.8e-06 56.6 100 33.0
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.8e-06 56.6 108 35.2
Psat2g152960 Pisum sativum HOM05D000002 ORTHO05D000001 2.8e-06 56.6 110 31.8
TPR.G34229 Trifolium pratense HOM05D006100 ORTHO05D007539 2.8e-06 56.6 115 27.0
Atru.chr9.1635 Acer truncatum HOM05D000002 ORTHO05D000001 3.6e-06 56.2 111 30.6
CSS0034832 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.6e-06 56.2 245 25.7
Dinv08503 Davidia involucrata HOM05D000002 ORTHO05D000001 3.6e-06 56.2 110 32.7
FvH4_3g07841 Fragaria vesca HOM05D000002 ORTHO05D000001 3.6e-06 56.2 119 32.8
Hma1.2p1_0903F.1_g234920 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-06 56.2 141 31.2
Hma1.2p1_1596F.1_g292760 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 3.6e-06 56.2 215 31.2
PSO017G4051 Papaver somniferum HOM05D000002 ORTHO05D000001 3.6e-06 56.2 115 36.5
Sabra16G0137700 Salix brachista HOM05D000002 ORTHO05D000001 3.6e-06 56.2 111 27.9
ECA240G0216 Erigeron canadensis HOM05D000006 ORTHO05D000001 4.7e-06 55.8 112 31.2
Hma1.2p1_0718F.1_g208440 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.7e-06 55.8 115 31.3
MD09G1100700 Malus domestica HOM05D000002 ORTHO05D000001 4.7e-06 55.8 108 35.2
Nitab4.5_0005858g0080 Nicotiana tabacum HOM05D010760 ORTHO05D000001 4.7e-06 55.8 84 41.7
CSS0041837 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.2e-06 55.5 245 27.8
Rhsim10G0160500 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.2e-06 55.5 179 26.8
RcHm_v2.0_Chr2g0117741 Rosa chinensis HOM05D000002 ORTHO05D000001 6.2e-06 55.5 241 25.7
Sed0012354 Sechium edule HOM05D007933 ORTHO05D000001 6.2e-06 55.5 114 28.9
Atru.chr13.248 Acer truncatum HOM05D000002 ORTHO05D000001 8.1e-06 55.1 111 31.5
Atru.chr7.838 Acer truncatum HOM05D000002 ORTHO05D000001 8.1e-06 55.1 110 31.8
CSS0017698 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.1e-06 55.1 245 27.8
COL.COLO4_29142 Corchorus olitorius HOM05D000002 ORTHO05D000001 8.1e-06 55.1 108 34.3
CsaV3_1G024270 Cucumis sativus L. HOM05D000002 ORTHO05D000001 8.1e-06 55.1 79 38.0
FvH4_7g19191 Fragaria vesca HOM05D000002 ORTHO05D000001 8.1e-06 55.1 108 35.2
Nn2g15971 Nelumbo nucifera HOM05D000002 ORTHO05D000001 8.1e-06 55.1 77 37.7
PSO063G5384 Papaver somniferum HOM05D000002 ORTHO05D000001 8.1e-06 55.1 108 37.0
QL08p061042 Quercus lobata HOM05D000002 ORTHO05D000001 8.1e-06 55.1 105 30.5
Rhsim09G0019300 Rhododendron simsii HOM05D000002 ORTHO05D000001 8.1e-06 55.1 121 32.2
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 8.1e-06 55.1 108 34.3


User provided reference genes

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