Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 8.9e-117 424.1 295 100.0
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 1.4e-101 373.6 295 91.9
PSO104G0025 Papaver somniferum HOM05D006785 ORTHO05D006259 3.2e-34 149.8 126 83.3
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 3.7e-22 109.8 186 40.9
Nn3g20927 Nelumbo nucifera HOM05D006785 ORTHO05D006259 1.4e-21 107.8 181 42.5
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 1.0e-16 91.7 136 47.1
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 6.8e-16 89.0 144 38.9
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 1.2e-15 88.2 182 37.9
TAR622G1344 Trochodendron aralioides HOM05D006785 ORTHO05D006259 5.7e-15 85.9 153 39.9
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 1.6e-12 77.8 134 45.5
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 4.5e-12 76.3 285 31.6
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 4.5e-12 76.3 285 31.6
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 7.7e-12 75.5 134 44.0
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 2.9e-11 73.6 256 29.3
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 1.1e-10 71.6 105 44.8
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 1.5e-10 71.2 134 41.0
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 1.9e-10 70.9 134 41.0
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 3.2e-10 70.1 134 36.6
VMungo0647G1995 Vigna mungo HOM05D006785 ORTHO05D006259 4.2e-10 69.7 102 42.2
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 5.5e-10 69.3 138 36.2
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 5.5e-10 69.3 134 40.3
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 5.5e-10 69.3 317 26.5
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 1.2e-09 68.2 134 36.6
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 2.7e-09 67.0 142 38.0
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 3.6e-09 66.6 170 32.9
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 4.7e-09 66.2 138 39.9
Lsat_1_v5_gn_6_18081 Lactuca sativa HOM05D009485 ORTHO05D006259 8.0e-09 65.5 181 42.0
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.0e-08 63.5 92 50.0
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.0e-08 63.5 92 50.0
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 3.0e-08 63.5 92 50.0
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 5.2e-08 62.8 132 39.4
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 5.2e-08 62.8 92 40.2
Aqoxy4G00148 Aquilegia oxysepala HOM05D006785 ORTHO05D006259 8.8e-08 62.0 256 34.4
QL08p044083 Quercus lobata HOM05D006785 ORTHO05D006259 8.8e-08 62.0 135 40.0
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 1.2e-07 61.6 133 39.8
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 1.2e-07 61.6 137 35.8
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 1.2e-07 61.6 264 29.2
FAN05G2931 Fragaria x ananassa HOM05D006785 ORTHO05D006259 2.0e-07 60.8 134 32.8
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 2.0e-07 60.8 141 34.0
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 3.4e-07 60.1 264 26.5
MBI07_g07832_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 3.4e-07 60.1 284 27.5
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 3.4e-07 60.1 134 31.3
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 7.5e-07 58.9 135 38.5
CANSAT64G1891 Cannabis sativa HOM05D006785 ORTHO05D006259 9.8e-07 58.5 133 37.6
Aa31LG5G5980 Aethionema arabicum HOM05D006785 ORTHO05D006259 1.3e-06 58.2 92 39.1
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 1.3e-06 58.2 111 43.2
CiPaw.03G189000 Carya illinoinensis HOM05D006785 ORTHO05D006259 1.7e-06 57.8 135 37.8
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 2.2e-06 57.4 180 28.9
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 3.7e-06 56.6 176 32.4
Cpa.g.sc50.80 Carica papaya HOM05D006785 ORTHO05D006259 3.7e-06 56.6 136 35.3
Carub.0001s0590 Capsella rubella HOM05D006785 ORTHO05D006259 8.3e-06 55.5 263 25.1
Nitab4.5_0002027g0170 Nicotiana tabacum HOM05D009485 ORTHO05D006259 8.3e-06 55.5 178 30.9


User provided reference genes

Program Settings