Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 0.0e+00 1436.8 850 100.0
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 0.0e+00 1384.0 850 97.4
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 2.8e-179 633.3 872 52.4
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 4.2e-159 566.2 902 49.1
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 1.9e-156 557.4 886 50.2
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 3.0e-149 533.5 886 48.9
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 3.6e-147 526.6 882 49.9
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 9.0e-146 521.9 869 51.1
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 3.9e-141 506.5 884 47.4
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 8.2e-139 498.8 866 50.7
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 2.4e-138 497.3 865 45.5
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 3.1e-138 496.9 878 42.0
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 6.9e-138 495.7 925 44.9
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 1.2e-137 495.0 868 45.0
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.9e-135 487.6 878 43.6
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 2.5e-135 487.3 949 43.1
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 3.3e-132 476.9 861 46.5
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 4.3e-132 476.5 879 45.4
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 1.4e-130 471.5 882 44.0
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 4.1e-130 469.9 884 43.6
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 3.2e-127 460.3 914 47.3
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 6.7e-125 452.6 1005 42.2
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 4.3e-124 449.9 872 45.1
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 1.6e-123 448.0 857 44.0
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 2.8e-123 447.2 857 48.7
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 5.0e-120 436.4 857 47.3
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 6.5e-120 436.0 861 47.5
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.4e-119 434.9 861 47.0
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 3.2e-119 433.7 865 43.9
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 1.2e-118 431.8 912 41.9
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 2.7e-118 430.6 889 44.1
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 1.0e-117 428.7 940 40.2
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 1.0e-117 428.7 901 44.0
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 1.8e-117 427.9 920 36.6
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.3e-117 427.6 979 37.7
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 2.8e-115 420.6 861 40.5
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 4.8e-115 419.9 865 41.6
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 3.4e-113 413.7 934 37.5
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 1.0e-112 412.1 819 43.3
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 1.3e-112 411.8 878 44.0
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 5.0e-112 409.8 818 44.3
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 6.5e-112 409.5 468 55.1
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 2.1e-110 404.4 502 51.2
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 2.7e-110 404.1 427 56.0
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 1.5e-108 398.3 976 38.4
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 2.0e-108 397.9 821 41.3
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 4.4e-108 396.7 864 40.3
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 5.7e-108 396.4 823 45.0
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 3.7e-107 393.7 884 41.0
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 4.1e-106 390.2 811 37.0
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 2.6e-105 387.5 841 37.9
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 1.7e-104 384.8 503 50.3
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 6.5e-104 382.9 821 40.9
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 1.5e-103 381.7 856 41.9
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 7.2e-103 379.4 819 44.1
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 1.4e-101 375.2 450 53.3
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 1.8e-101 374.8 517 47.6
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 3.0e-101 374.0 875 38.1
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 4.0e-101 373.6 435 53.6
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 1.2e-100 372.1 514 48.8
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 7.5e-100 369.4 841 40.1
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 8.2e-99 365.9 885 41.8
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 1.8e-98 364.8 937 36.5
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 1.7e-96 358.2 875 40.2
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 3.8e-96 357.1 814 39.6
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 1.1e-95 355.5 830 38.8
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 1.1e-95 355.5 943 36.3
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 2.7e-94 350.9 838 41.1
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 6.1e-94 349.7 409 54.8
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 2.3e-93 347.8 457 47.7
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 1.2e-92 345.5 808 38.2
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 1.3e-91 342.0 442 50.7
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 6.3e-91 339.7 458 49.3
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 1.6e-89 335.1 439 50.6
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 1.6e-89 335.1 848 34.8
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 2.0e-89 334.7 471 47.6
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 3.5e-89 334.0 445 49.2
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 1.7e-88 331.6 539 43.2
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 4.2e-87 327.0 448 48.9
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 4.2e-87 327.0 511 44.6
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 9.5e-87 325.9 439 50.3
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 1.0e-85 322.4 472 46.2
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 1.4e-85 322.0 458 47.6
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 2.3e-85 321.2 439 49.2
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 4.0e-85 320.5 439 48.7
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 8.9e-85 319.3 808 41.5
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 1.5e-84 318.5 483 44.7
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 1.3e-83 315.5 898 36.6
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 6.3e-83 313.2 374 52.9
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 6.3e-83 313.2 758 39.4
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 8.3e-83 312.8 423 45.9
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 1.1e-82 312.4 444 47.3
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 1.1e-82 312.4 448 47.3
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 4.1e-82 310.5 455 48.4
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 2.7e-81 307.8 434 48.6
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 6.6e-56 223.4 433 38.8
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 6.6e-56 223.4 433 38.8
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 1.3e-51 209.1 625 37.8
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 7.8e-49 199.9 673 36.0
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 9.9e-44 183.0 395 39.5
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 2.8e-38 164.9 387 38.2
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 1.8e-37 162.2 146 65.1
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 5.3e-29 134.0 128 59.4
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 3.4e-28 131.3 384 34.1
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.3e-27 129.4 556 39.7
TAR628G0206 Trochodendron aralioides HOM05D006481 ORTHO05D008160 6.7e-24 117.1 272 43.8
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 2.9e-19 101.7 164 41.5
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 8.4e-19 100.1 166 43.4
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 4.6e-17 94.4 226 34.1
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 7.9e-17 93.6 171 40.9
Duzib052G0964 Durio zibethinus HOM05D006481 ORTHO05D008160 5.1e-16 90.9 135 43.7
Atru.chr5.2411 Acer truncatum HOM05D006481 ORTHO05D008160 5.9e-12 77.4 50 68.0
Hma1.2p1_0000F.1_g001000 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 2.2e-11 75.5 447 28.9
RcHm_v2.0_Chr6g0252961 Rosa chinensis HOM05D006481 ORTHO05D008160 2.9e-11 75.1 99 43.4
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 1.9e-10 72.4 108 43.5
SGA_v2.0_scaffold4001G54416 Striga asiatica HOM05D006481 ORTHO05D008160 1.8e-08 65.9 51 64.7
Oeu039499.1 Olea europaea HOM05D006481 ORTHO05D008160 5.1e-08 64.3 39 76.9
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 5.7e-07 60.8 41 73.2
BcaC05g27423 Brassica carinata HOM05D006481 ORTHO05D008160 7.4e-07 60.5 56 55.4


User provided reference genes

Program Settings