Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1844 Papaver somniferum HOM05D006750 ORTHO05D008426 3.1e-104 381.7 183 100.0
PSO675G8070 Papaver somniferum HOM05D006750 ORTHO05D008426 2.3e-99 365.5 183 95.1
Nn7g38126 Nelumbo nucifera HOM05D006750 ORTHO05D008426 3.6e-52 208.8 153 63.4
TAR627G0115 Trochodendron aralioides HOM05D006750 ORTHO05D008426 2.4e-48 196.1 154 63.0
vmacro03507 Vaccinium macrocarpon HOM05D006750 ORTHO05D008426 2.3e-46 189.5 166 56.0
Ciclev10016972m.g Citrus clementina HOM05D006750 ORTHO05D008426 1.5e-45 186.8 159 57.2
BolC4t22432H Brassica oleracea HOM05D006750 ORTHO05D008426 2.5e-45 186.0 156 55.1
CSS0027015 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 4.3e-45 185.3 171 53.2
Aqoxy1G01469 Aquilegia oxysepala HOM05D006750 ORTHO05D008426 5.6e-45 184.9 171 54.4
Actinidia22388 Actinidia chinensis HOM05D006750 ORTHO05D008426 1.2e-44 183.7 170 55.9
BcaC02g11618 Brassica carinata HOM05D006750 ORTHO05D008426 1.6e-44 183.3 156 54.5
A05p06970 Brassica napus HOM05D006750 ORTHO05D008426 1.6e-44 183.3 156 55.1
C04p13120 Brassica napus HOM05D006750 ORTHO05D008426 1.6e-44 183.3 156 54.5
BraA05t19661Z Brassica rapa HOM05D006750 ORTHO05D008426 1.6e-44 183.3 156 54.5
BcaC02g12068 Brassica carinata HOM05D006750 ORTHO05D008426 2.1e-44 183.0 156 54.5
C04p08300 Brassica napus HOM05D006750 ORTHO05D008426 4.7e-44 181.8 156 53.8
Solyc02g069070.3 Solanum lycopersicum HOM05D006750 ORTHO05D008426 4.7e-44 181.8 151 57.0
RhsimUnG0232200 Rhododendron simsii HOM05D006750 ORTHO05D008426 6.2e-44 181.4 158 55.7
Cc09_g06280 Coffea canephora HOM05D006750 ORTHO05D008426 1.4e-43 180.3 144 56.2
Dinv11873 Davidia involucrata HOM05D006750 ORTHO05D008426 1.8e-43 179.9 155 57.4
HanXRQChr07g0189661 Helianthus annuus HOM05D006750 ORTHO05D008426 2.4e-43 179.5 145 55.9
Potri.012G120100 Populus trichocarpa HOM05D006750 ORTHO05D008426 2.4e-43 179.5 155 54.2
CARHR134300 Cardamine hirsuta HOM05D006750 ORTHO05D008426 5.2e-43 178.3 158 55.7
BcaB02g09122 Brassica carinata HOM05D006750 ORTHO05D008426 6.9e-43 177.9 172 51.2
CAN.G1222.19 Capsicum annuum HOM05D006750 ORTHO05D008426 6.9e-43 177.9 151 55.0
Nitab4.5_0003773g0080 Nicotiana tabacum HOM05D006750 ORTHO05D008426 6.9e-43 177.9 152 54.6
CDE06G2778 Ceratophyllum demersum HOM05D006750 ORTHO05D008426 1.2e-42 177.2 143 60.1
SGA_v2.0_scaffold298G47680 Striga asiatica HOM05D006750 ORTHO05D008426 1.2e-42 177.2 144 56.9
Hma1.2p1_0040F.1_g025070 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 1.5e-42 176.8 128 64.1
GSVIVG01012094001 Vitis vinifera HOM05D006750 ORTHO05D008426 1.5e-42 176.8 136 59.6
Lj1A1143T38 Lonicera japonica HOM05D006750 ORTHO05D008426 2.0e-42 176.4 144 59.0
Nitab4.5_0002056g0050 Nicotiana tabacum HOM05D006750 ORTHO05D008426 2.0e-42 176.4 152 55.3
Sabra15G0136900 Salix brachista HOM05D006750 ORTHO05D008426 2.6e-42 176.0 153 53.6
FvH4_3g12150 Fragaria vesca HOM05D006750 ORTHO05D008426 3.4e-42 175.6 155 52.3
Manes.11G104340 Manihot esculenta HOM05D006750 ORTHO05D008426 3.4e-42 175.6 161 51.6
Sed0026407 Sechium edule HOM05D006750 ORTHO05D008426 4.4e-42 175.3 139 59.0
MELO3C021769.2 Cucumis melo HOM05D006750 ORTHO05D008426 7.6e-42 174.5 140 55.7
Potri.012G120220 Populus trichocarpa HOM05D006750 ORTHO05D008426 7.6e-42 174.5 155 52.9
ClCG01G009300 Citrullus lanatus HOM05D006750 ORTHO05D008426 9.9e-42 174.1 150 53.3
Atru.chr12.2220 Acer truncatum HOM05D006750 ORTHO05D008426 1.3e-41 173.7 155 52.9
DCAR_004323 Daucus carota HOM05D006750 ORTHO05D008426 1.7e-41 173.3 142 60.6
CSS0019703 Camellia sinensis var. sinensis HOM05D006750 ORTHO05D008426 2.2e-41 172.9 161 54.7
Thecc.06G141200 Theobroma cacao HOM05D006750 ORTHO05D008426 2.2e-41 172.9 159 52.2
FAN25G1681 Fragaria x ananassa HOM05D006750 ORTHO05D008426 2.9e-41 172.6 155 52.3
Glyma.02G206800 Glycine max HOM05D006750 ORTHO05D008426 2.9e-41 172.6 134 56.7
Thecc.06G140200 Theobroma cacao HOM05D006750 ORTHO05D008426 2.9e-41 172.6 159 52.2
Ca_21154_v3 Cicer arietinum L. HOM05D006750 ORTHO05D008426 3.8e-41 172.2 135 57.8
FAN16G3293 Fragaria x ananassa HOM05D006750 ORTHO05D008426 3.8e-41 172.2 156 51.9
Prupe.4G110300 Prunus persica HOM05D006750 ORTHO05D008426 3.8e-41 172.2 142 53.5
Carub.0004s2150 Capsella rubella HOM05D006750 ORTHO05D008426 4.9e-41 171.8 143 56.6
Psat0s3953g0080 Pisum sativum HOM05D006750 ORTHO05D008426 4.9e-41 171.8 145 51.0
AL4G36810 Arabidopsis lyrata HOM05D006750 ORTHO05D008426 6.4e-41 171.4 143 53.1
AT2G39440 Arabidopsis thaliana HOM05D006750 ORTHO05D008426 6.4e-41 171.4 144 53.5
MD10G1234600 Malus domestica HOM05D006750 ORTHO05D008426 6.4e-41 171.4 160 55.0
Phvul.003G153500 Phaseolus vulgaris HOM05D006750 ORTHO05D008426 8.4e-41 171.0 134 56.7
Sp4g21740 Schrenkiella parvula HOM05D006750 ORTHO05D008426 1.1e-40 170.6 146 55.5
CsaV3_1G046580 Cucumis sativus L. HOM05D006750 ORTHO05D008426 1.4e-40 170.2 161 51.6
Thhalv10017350m.g Eutrema salsugineum HOM05D006750 ORTHO05D008426 1.4e-40 170.2 144 55.6
Lj4g0008374 Lotus japonicus HOM05D006750 ORTHO05D008426 1.4e-40 170.2 143 55.2
TPR.G24866 Trifolium pratense HOM05D006750 ORTHO05D008426 1.4e-40 170.2 147 50.3
TWI63G0081 Tripterygium wilfordii HOM05D006750 ORTHO05D008426 1.9e-40 169.9 143 56.6
Gohir.A04G017000 Gossypium hirsutum HOM05D006750 ORTHO05D008426 7.1e-40 167.9 160 51.9
Eucgr.D01041 Eucalyptus grandis HOM05D006750 ORTHO05D008426 1.2e-39 167.2 152 54.6
Gorai.009G437900 Gossypium raimondii HOM05D006750 ORTHO05D008426 1.2e-39 167.2 160 51.9
Lsat_1_v5_gn_5_36321 Lactuca sativa HOM05D006750 ORTHO05D008426 1.6e-39 166.8 161 50.3
SalBow8G0594 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.6e-39 166.8 137 56.2
SalBow8G2736 Salvia bowleyana HOM05D006750 ORTHO05D008426 1.6e-39 166.8 137 56.2
Haze_06024 Corylus avellana HOM05D006750 ORTHO05D008426 2.7e-39 166.0 140 57.9
VMungo1215G0360 Vigna mungo HOM05D006750 ORTHO05D008426 2.7e-39 166.0 134 56.7
Migut.M01971 Erythranthe guttata HOM05D006750 ORTHO05D008426 3.5e-39 165.6 143 53.1
Gohir.D05G369200 Gossypium hirsutum HOM05D006750 ORTHO05D008426 6.0e-39 164.9 160 51.2
RcHm_v2.0_Chr5g0019891 Rosa chinensis HOM05D006750 ORTHO05D008426 6.0e-39 164.9 154 50.0
MSTRG.22268 Avicennia marina HOM05D006750 ORTHO05D008426 7.8e-39 164.5 145 51.7
Haze_06026 Corylus avellana HOM05D006750 ORTHO05D008426 7.8e-39 164.5 140 57.1
CANSAT21G0613 Cannabis sativa HOM05D006750 ORTHO05D008426 1.0e-38 164.1 159 51.6
CiPaw.10G065100 Carya illinoinensis HOM05D006750 ORTHO05D008426 1.3e-38 163.7 140 52.9
Duzib235G0570 Durio zibethinus HOM05D006750 ORTHO05D008426 1.3e-38 163.7 149 55.0
EL10Ac2g02809 Beta vulgaris HOM05D006750 ORTHO05D008426 1.7e-38 163.3 161 47.2
Sp4g08180 Schrenkiella parvula HOM05D006750 ORTHO05D008426 3.0e-38 162.5 149 53.0
MD05G1254400 Malus domestica HOM05D006750 ORTHO05D008426 5.1e-38 161.8 144 54.2
HPP92_004186 Vanilla planifolia HOM05D006750 ORTHO05D008426 5.1e-38 161.8 153 51.0
PGR142G2582 Punica granatum HOM05D006750 ORTHO05D008426 8.7e-38 161.0 153 51.0
ECA246G4127 Erigeron canadensis HOM05D006750 ORTHO05D008426 9.6e-37 157.5 132 53.8
QL11p018076 Quercus lobata HOM05D006750 ORTHO05D008426 2.8e-36 156.0 151 48.3
AUR62007362 Chenopodium quinoa HOM05D006750 ORTHO05D008426 6.2e-36 154.8 138 49.3
Oeu052673.2 Olea europaea HOM05D006750 ORTHO05D008426 8.1e-36 154.5 132 53.0
unitig_748.g7497 Utricularia gibba HOM05D006750 ORTHO05D008426 8.1e-36 154.5 136 50.7
THA.LOC104824253 Tarenaya hassleriana HOM05D006750 ORTHO05D008426 1.8e-35 153.3 155 49.7
Lalb_Chr02g0152091 Lupinus albus HOM05D006750 ORTHO05D008426 1.5e-34 150.2 150 48.0
arahy.Tifrunner.gnm1.ann1.8322W6 Arachis hypogaea HOM05D006750 ORTHO05D008426 2.0e-34 149.8 134 48.5
arahy.Tifrunner.gnm1.ann1.RPZE8L Arachis hypogaea HOM05D006750 ORTHO05D008426 2.0e-34 149.8 134 48.5
AUR62018626 Chenopodium quinoa HOM05D006750 ORTHO05D008426 3.4e-34 149.1 138 48.6
Ah.12g055560 Amaranthus hybridus HOM05D002269 ORTHO05D002421 2.2e-33 146.4 186 42.5
Sc05g0005750 Simmondsia chinensis HOM05D006750 ORTHO05D008426 6.0e-31 138.3 125 55.2
Os02g0168900 Oryza sativa ssp. japonica HOM05D006750 ORTHO05D008426 5.1e-30 135.2 145 48.3
Aa31LG5G20440 Aethionema arabicum HOM05D004294 ORTHO05D004899 8.1e-28 127.9 107 55.1
Cfa000723 Carpinus fangiana HOM05D006750 ORTHO05D008426 2.4e-27 126.3 106 53.8
COL.COLO4_30981 Corchorus olitorius HOM05D006750 ORTHO05D008426 2.4e-27 126.3 101 55.4
Peaxi162Scf00149g00921 Petunia axillaris HOM05D006750 ORTHO05D008426 9.0e-27 124.4 151 43.7
Hma1.2p1_0040F.1_g025080 Hydrangea macrophylla HOM05D006750 ORTHO05D008426 7.6e-26 121.3 88 62.5
ATR0763G132 Amborella trichopoda HOM05D006750 ORTHO05D008426 6.4e-25 118.2 153 41.8
SMO367G1186 Selaginella moellendorffii HOM05D006750 ORTHO05D008426 2.4e-24 116.3 129 42.6
Pp3c2_9480 Physcomitrium patens HOM05D006750 ORTHO05D008426 6.0e-23 111.7 136 39.7
Mapoly0007s0049 Marchantia polymorpha HOM05D006750 ORTHO05D008426 1.3e-22 110.5 137 39.4
CBR_g39953 Chara braunii HOM05D006750 ORTHO05D008426 1.5e-21 107.1 166 33.1
CARHR087370 Cardamine hirsuta HOM05D006750 ORTHO05D008426 1.3e-20 104.0 86 57.0
SHI31544 Sapria himalayana HOM05D006750 ORTHO05D008426 6.9e-19 98.2 218 29.8
Cpa.g.sc135.32 Carica papaya HOM05D006750 ORTHO05D008426 4.5e-18 95.5 78 61.5
Hund11170 Selenicereus undatus HOM05D006750 ORTHO05D008426 8.4e-17 91.3 81 54.3
Zm00001eb233030 Zea mays HOM05D006750 ORTHO05D008426 2.3e-14 83.2 154 33.1
Sopen02g018170 Solanum pennellii HOM05D006750 ORTHO05D008426 4.3e-13 79.0 61 50.8
AagrBONN_evm.TU.Sc2ySwM_344.3424 Anthoceros agrestis HOM05D006750 ORTHO05D008426 2.4e-11 73.2 101 35.6
TPR.G24917 Trifolium pratense HOM05D006750 ORTHO05D008426 1.9e-08 63.5 73 41.1
Hund11169 Selenicereus undatus HOM05D006750 ORTHO05D008426 4.2e-08 62.4 68 39.7
PRCOL_00005799 Prasinoderma coloniale HOM05D006750 ORTHO05D008426 1.4e-06 57.4 123 30.1
Zm00001eb233050 Zea mays HOM05D006750 ORTHO05D008426 3.9e-06 55.8 129 31.8


User provided reference genes

Program Settings