Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1740 Papaver somniferum HOM05D010608 ORTHO05D002268 5.6e-106 387.5 179 100.0
PSO339G5936 Papaver somniferum HOM05D010608 ORTHO05D002268 3.8e-78 295.0 166 81.9
PSO144G0007 Papaver somniferum HOM05D010608 ORTHO05D002268 1.3e-33 147.1 154 43.5
PSO302G0296 Papaver somniferum HOM05D010608 ORTHO05D002268 1.3e-33 147.1 154 44.2
PSO017G2052 Papaver somniferum HOM05D010608 ORTHO05D002268 8.2e-33 144.4 155 43.2
PSO339G6014 Papaver somniferum HOM05D010608 ORTHO05D002268 1.4e-32 143.7 156 42.3
PSO170G2309 Papaver somniferum HOM05D010608 ORTHO05D002268 5.9e-31 138.3 154 39.6
PSO063G1821 Papaver somniferum HOM05D010608 ORTHO05D002268 4.2e-29 132.1 150 41.3
PSO063G3326 Papaver somniferum HOM05D000593 ORTHO05D000562 5.5e-29 131.7 153 47.7
PSO832G1366 Papaver somniferum HOM05D000593 ORTHO05D000562 3.1e-24 115.9 165 37.0
PSO017G7328 Papaver somniferum HOM05D010608 ORTHO05D002268 1.9e-21 106.7 154 35.7
PSO210G4809 Papaver somniferum HOM05D010608 ORTHO05D002268 4.2e-21 105.5 155 36.8
PSO210G3617 Papaver somniferum HOM05D010608 ORTHO05D002268 2.3e-19 99.8 120 41.7
PSO761G0414 Papaver somniferum HOM05D010608 ORTHO05D002268 1.5e-13 80.5 80 40.0
PSO063G2019 Papaver somniferum HOM05D010608 ORTHO05D002268 9.4e-13 77.8 79 41.8
PSO017G2304 Papaver somniferum HOM05D010608 ORTHO05D002268 1.6e-12 77.0 114 34.2
PSO782G3441 Papaver somniferum HOM05D000593 ORTHO05D002268 4.0e-11 72.4 84 36.9
PSO210G1587 Papaver somniferum HOM05D003216 ORTHO05D002268 1.7e-09 67.0 95 36.8
TWI53G1229 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 3.7e-09 65.9 105 27.6
Atru.chr11.1014 Acer truncatum HOM05D000593 ORTHO05D000562 2.4e-08 63.2 122 29.5
SGA_v2.0_scaffold106G30618 Striga asiatica HOM05D000593 ORTHO05D002268 2.4e-08 63.2 106 30.2
SGA_v2.0_scaffold126G33866 Striga asiatica HOM05D000593 ORTHO05D002268 2.4e-08 63.2 106 30.2
SGA_v2.0_scaffold17G08149 Striga asiatica HOM05D000593 ORTHO05D002268 2.4e-08 63.2 106 30.2
SGA_v2.0_scaffold1G00721 Striga asiatica HOM05D000593 ORTHO05D002268 2.4e-08 63.2 106 30.2
SGA_v2.0_scaffold22G09752 Striga asiatica HOM05D000593 ORTHO05D002268 2.4e-08 63.2 106 30.2
SGA_v2.0_scaffold286G47098 Striga asiatica HOM05D000164 ORTHO05D000096 2.4e-08 63.2 106 30.2
SGA_v2.0_scaffold31G12776 Striga asiatica HOM05D000593 ORTHO05D002268 2.4e-08 63.2 106 30.2
TWI14G0423 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 2.4e-08 63.2 105 26.7
Ca_11017_v3 Cicer arietinum L. HOM05D003216 ORTHO05D002268 3.1e-08 62.8 124 25.8
PSO017G5174 Papaver somniferum HOM05D010608 ORTHO05D002268 3.1e-08 62.8 90 33.3
PSO782G0542 Papaver somniferum HOM05D010608 ORTHO05D002268 3.1e-08 62.8 92 38.0
Atru.chr11.19 Acer truncatum HOM05D000593 ORTHO05D000562 5.4e-08 62.0 132 25.8
Atru.chr11.22 Acer truncatum HOM05D000593 ORTHO05D000562 5.4e-08 62.0 132 25.8
CANSAT64G1746 Cannabis sativa HOM05D000593 ORTHO05D002268 7.0e-08 61.6 102 29.4
CANSAT64G1841 Cannabis sativa HOM05D000593 ORTHO05D002268 7.0e-08 61.6 102 29.4
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 7.0e-08 61.6 104 29.8
TWI73G0826 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 7.0e-08 61.6 105 29.5
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 9.1e-08 61.2 93 30.1
TWI74G1657 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 9.1e-08 61.2 105 28.6
PSO063G0602 Papaver somniferum HOM05D000593 ORTHO05D000562 1.2e-07 60.8 86 38.4
PSO210G1163 Papaver somniferum HOM05D000593 ORTHO05D000562 1.2e-07 60.8 94 35.1
TWI15G1236 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.2e-07 60.8 95 26.3
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 2.7e-07 59.7 107 24.3
ECA248G1709 Erigeron canadensis HOM05D000593 ORTHO05D000562 2.7e-07 59.7 106 30.2
Atru.chr1.3004 Acer truncatum HOM05D000593 ORTHO05D002268 3.5e-07 59.3 122 27.9
CSS0006571 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 3.5e-07 59.3 105 27.6
CSS0004654 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.5e-07 58.9 125 25.6
CSS0033855 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 4.5e-07 58.9 105 26.7
TWI31G0828 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 4.5e-07 58.9 105 28.6
TWI59G1482 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 5.9e-07 58.5 105 28.6
ECA233G2800 Erigeron canadensis HOM05D000593 ORTHO05D000562 1.0e-06 57.8 106 30.2
Rhsim01G0176400 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.3e-06 57.4 150 25.3
Rhsim06G0090900 Rhododendron simsii HOM05D003216 ORTHO05D002268 1.3e-06 57.4 150 25.3
TWI15G0761 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 1.3e-06 57.4 87 31.0
CSS0028555 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 1.7e-06 57.0 94 29.8
PSO421G0407 Papaver somniferum HOM05D003216 ORTHO05D002268 1.7e-06 57.0 93 31.2
MD08G1164400 Malus domestica HOM05D000593 ORTHO05D000562 2.3e-06 56.6 73 31.5
RcHm_v2.0_Chr7g0206311 Rosa chinensis HOM05D000593 ORTHO05D000562 2.9e-06 56.2 114 28.1
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 5.0e-06 55.5 93 25.8
ECA240G0778 Erigeron canadensis HOM05D000593 ORTHO05D000562 5.0e-06 55.5 106 29.2
ECA234G2373 Erigeron canadensis HOM05D000593 ORTHO05D000562 6.6e-06 55.1 106 30.2
TWI75G0671 Tripterygium wilfordii HOM05D000593 ORTHO05D000562 6.6e-06 55.1 132 26.5
CSS0016602 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D002268 8.6e-06 54.7 123 22.8
TWI38G1252 Tripterygium wilfordii HOM05D000593 ORTHO05D002268 8.6e-06 54.7 105 27.6


User provided reference genes

Program Settings