Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 8.2e-64 246.9 125 100.0
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 1.5e-62 242.7 125 97.6
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 4.8e-48 194.5 125 78.4
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 1.6e-46 189.5 123 74.0
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 1.3e-45 186.4 122 74.6
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 1.9e-44 182.6 120 75.0
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 2.5e-44 182.2 125 70.4
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 5.5e-44 181.0 125 70.4
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 9.4e-44 180.3 125 69.6
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.2e-43 179.9 122 72.1
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.6e-43 179.5 115 72.2
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.6e-43 179.5 123 72.4
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.7e-43 177.9 115 70.4
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 4.7e-43 177.9 125 68.8
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 4.7e-43 177.9 123 70.7
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 6.1e-43 177.6 123 67.5
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 8.0e-43 177.2 115 69.6
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 8.0e-43 177.2 118 72.0
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 1.0e-42 176.8 123 71.5
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 1.0e-42 176.8 125 71.2
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 1.8e-42 176.0 121 66.9
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 2.3e-42 175.6 120 70.0
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 2.3e-42 175.6 123 67.5
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 3.0e-42 175.3 121 71.9
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 3.0e-42 175.3 125 67.2
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 4.0e-42 174.9 125 68.0
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 1.2e-41 173.3 121 69.4
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.2e-41 173.3 127 70.1
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 1.5e-41 172.9 123 68.3
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 2.0e-41 172.6 120 68.3
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 2.0e-41 172.6 125 66.4
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 2.0e-41 172.6 127 70.1
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 2.0e-41 172.6 127 70.1
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 2.0e-41 172.6 118 72.0
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 2.0e-41 172.6 125 70.4
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 2.6e-41 172.2 125 70.4
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 2.6e-41 172.2 120 66.7
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 4.4e-41 171.4 123 69.1
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 4.4e-41 171.4 125 64.8
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 4.4e-41 171.4 121 69.4
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 5.7e-41 171.0 123 66.7
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 5.7e-41 171.0 118 71.2
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 7.5e-41 170.6 118 67.8
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 1.3e-40 169.9 123 67.5
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 1.7e-40 169.5 125 69.6
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 2.2e-40 169.1 123 67.5
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.2e-40 169.1 123 67.5
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 2.2e-40 169.1 125 64.8
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 4.8e-40 167.9 123 67.5
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 4.8e-40 167.9 123 68.3
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 6.3e-40 167.5 154 57.8
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 8.3e-40 167.2 120 68.3
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 1.1e-39 166.8 119 67.2
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 1.1e-39 166.8 119 67.2
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 1.1e-39 166.8 119 67.2
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.1e-39 166.8 119 66.4
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 1.4e-39 166.4 123 65.0
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 1.8e-39 166.0 119 64.7
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.8e-39 166.0 123 65.9
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 2.4e-39 165.6 120 65.0
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 9.1e-39 163.7 119 66.4
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 1.2e-38 163.3 119 66.4
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 1.2e-38 163.3 119 69.7
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 1.2e-38 163.3 125 61.6
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 1.6e-38 162.9 119 65.5
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 2.0e-38 162.5 119 64.7
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 2.7e-38 162.2 119 63.9
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 3.5e-38 161.8 124 61.3
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 3.5e-38 161.8 122 61.5
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 3.5e-38 161.8 117 67.5
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 3.5e-38 161.8 124 60.5
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 4.5e-38 161.4 123 66.7
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 5.9e-38 161.0 121 65.3
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 7.7e-38 160.6 119 64.7
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 7.7e-38 160.6 121 65.3
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.3e-37 159.8 123 67.5
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.3e-37 159.8 123 67.5
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 2.9e-37 158.7 137 56.9
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 2.9e-37 158.7 124 58.9
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 3.8e-37 158.3 125 60.0
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 1.1e-36 156.8 119 65.5
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 1.1e-36 156.8 118 63.6
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 4.2e-36 154.8 120 59.2
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 5.5e-36 154.5 116 61.2
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 5.5e-36 154.5 120 60.0
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 1.6e-35 152.9 123 56.9
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 6.1e-35 151.0 107 63.6
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 1.0e-34 150.2 126 58.7
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 5.7e-33 144.4 104 64.4
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 2.2e-32 142.5 109 63.3
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 1.2e-30 136.7 101 61.4
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 3.5e-30 135.2 174 44.3
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 3.8e-29 131.7 89 71.9
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 8.6e-29 130.6 87 67.8
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 5.6e-28 127.9 88 71.6
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 1.2e-27 126.7 87 67.8
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 4.7e-27 124.8 91 65.9
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 8.0e-27 124.0 113 52.2
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.0e-26 123.6 94 60.6
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.4e-26 123.2 91 68.1
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.8e-26 122.9 91 68.1
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 3.0e-26 122.1 96 63.5
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 5.2e-26 121.3 92 66.3
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 1.5e-25 119.8 126 50.0
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 3.4e-25 118.6 121 46.3
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 3.4e-25 118.6 98 58.2
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.1e-23 113.6 115 50.4
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 7.0e-23 110.9 102 54.9
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 9.2e-23 110.5 88 59.1
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 9.2e-23 110.5 103 48.5
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.7e-21 106.3 85 56.5
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 1.1e-15 87.0 54 74.1
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 3.9e-13 78.6 123 42.3


User provided reference genes

Program Settings