Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 7.9e-146 520.4 257 100.0
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 4.6e-69 265.4 235 57.4
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 1.5e-67 260.4 224 58.5
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 2.5e-67 259.6 260 52.3
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 2.5e-67 259.6 256 54.7
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 3.3e-67 259.2 265 54.7
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 4.3e-67 258.8 242 56.2
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 2.1e-66 256.5 259 51.7
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 2.8e-66 256.1 230 53.5
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 6.2e-66 255.0 197 62.9
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 1.4e-65 253.8 240 54.6
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 1.8e-65 253.4 262 50.8
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 3.1e-65 252.7 259 51.7
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 8.9e-65 251.1 264 51.1
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.2e-64 250.8 223 55.2
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 2.0e-64 250.0 252 51.2
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 4.4e-64 248.8 271 51.7
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 5.8e-64 248.4 268 51.1
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 5.8e-64 248.4 262 54.2
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.3e-63 247.3 229 54.6
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 1.3e-63 247.3 223 54.7
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 2.2e-63 246.5 226 55.8
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.2e-63 246.5 199 58.8
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 3.8e-63 245.7 246 51.6
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 3.8e-63 245.7 265 50.9
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 4.9e-63 245.4 259 51.4
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 1.1e-62 244.2 255 50.6
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.4e-62 243.8 205 60.5
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 1.9e-62 243.4 215 54.9
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 3.2e-62 242.7 194 60.3
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 3.2e-62 242.7 205 60.5
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 3.2e-62 242.7 227 52.4
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 5.4e-62 241.9 248 50.0
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 5.4e-62 241.9 259 52.1
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 5.4e-62 241.9 201 58.2
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 5.4e-62 241.9 189 60.3
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 7.1e-62 241.5 194 61.3
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 7.1e-62 241.5 179 62.6
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 9.3e-62 241.1 203 55.7
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 2.1e-61 240.0 206 56.8
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 3.5e-61 239.2 194 60.3
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 3.5e-61 239.2 199 58.8
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 4.6e-61 238.8 189 60.3
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 7.8e-61 238.0 159 67.9
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 1.0e-60 237.7 224 51.8
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 1.3e-60 237.3 210 55.2
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 1.7e-60 236.9 206 56.3
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 2.3e-60 236.5 162 66.0
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 2.3e-60 236.5 221 55.2
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 2.3e-60 236.5 255 49.4
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 3.0e-60 236.1 197 56.3
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 3.0e-60 236.1 272 48.5
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 3.0e-60 236.1 191 59.7
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 3.0e-60 236.1 183 58.5
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 3.9e-60 235.7 192 59.4
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 6.6e-60 235.0 196 61.2
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 6.6e-60 235.0 244 52.0
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 1.1e-59 234.2 236 50.0
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 1.1e-59 234.2 203 55.7
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 2.5e-59 233.0 201 55.2
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 2.5e-59 233.0 169 63.3
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 3.3e-59 232.6 196 61.2
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 3.3e-59 232.6 230 49.6
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 4.3e-59 232.3 192 58.9
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 4.3e-59 232.3 162 64.8
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 5.6e-59 231.9 196 60.7
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 5.6e-59 231.9 233 51.9
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 7.3e-59 231.5 289 46.7
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 9.6e-59 231.1 195 62.1
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 9.6e-59 231.1 201 59.2
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 2.1e-58 229.9 249 47.8
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 3.6e-58 229.2 204 56.9
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 3.6e-58 229.2 199 55.3
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 6.2e-58 228.4 247 48.2
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 6.2e-58 228.4 204 56.9
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 8.1e-58 228.0 190 55.8
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 8.1e-58 228.0 223 49.8
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 1.4e-57 227.3 270 48.1
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.8e-57 226.9 204 56.4
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 3.1e-57 226.1 271 47.6
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 4.0e-57 225.7 174 59.8
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 4.0e-57 225.7 232 49.1
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 6.9e-57 224.9 265 48.3
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 2.6e-56 223.0 192 59.9
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 3.4e-56 222.6 181 57.5
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 9.9e-56 221.1 210 56.7
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 1.7e-55 220.3 195 54.9
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.4e-54 217.2 184 59.8
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 2.4e-54 216.5 193 58.5
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 1.2e-53 214.2 197 55.3
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 7.9e-53 211.5 220 48.6
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 1.0e-52 211.1 196 52.6
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 8.7e-52 208.0 268 47.4
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 1.1e-51 207.6 213 49.8
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 2.8e-50 203.0 221 50.7
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 1.5e-48 197.2 259 40.9
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 3.4e-48 196.1 372 34.9
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 2.1e-45 186.8 220 42.7
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 4.6e-45 185.7 125 68.8
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 6.7e-44 181.8 188 51.6
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 7.6e-40 168.3 179 47.5
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.4e-33 147.5 189 42.9
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 5.3e-33 145.6 221 42.5
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 5.3e-33 145.6 160 43.8
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 2.3e-28 130.2 203 40.9
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.0e-24 117.1 117 54.7
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 7.9e-21 105.1 66 69.7
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 2.3e-20 103.6 79 63.3
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 6.7e-20 102.1 205 33.7
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 2.6e-19 100.1 233 28.3
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 4.4e-19 99.4 176 34.7
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-16 88.6 78 55.1
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 3.6e-13 79.7 107 44.9
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 2.6e-08 63.5 52 51.9
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 3.5e-08 63.2 94 41.5
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 1.0e-07 61.6 32 84.4


User provided reference genes

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