Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 1.2e-103 379.8 181 100.0
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 9.2e-24 114.4 163 44.8
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 1.6e-23 113.6 166 42.2
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 4.6e-23 112.1 163 43.6
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 2.3e-22 109.8 166 41.0
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 1.9e-21 106.7 158 40.5
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 3.3e-21 105.9 168 42.9
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 4.3e-21 105.5 168 42.9
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 5.6e-21 105.1 164 37.8
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 9.5e-21 104.4 167 37.1
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 2.8e-20 102.8 164 39.6
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 2.8e-20 102.8 161 36.0
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 3.6e-20 102.4 160 38.8
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 3.6e-20 102.4 160 38.8
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 6.2e-20 101.7 161 39.1
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 1.1e-19 100.9 161 39.1
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 1.1e-19 100.9 161 39.1
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 1.1e-19 100.9 157 40.8
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 1.1e-19 100.9 164 36.6
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 1.4e-19 100.5 166 39.2
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 1.8e-19 100.1 164 36.6
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 2.3e-19 99.8 164 36.6
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 4.0e-19 99.0 156 38.5
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 4.0e-19 99.0 158 36.7
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 4.0e-19 99.0 158 36.7
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 4.0e-19 99.0 161 38.5
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 5.2e-19 98.6 158 38.6
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 8.9e-19 97.8 158 36.1
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 8.9e-19 97.8 158 36.1
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 8.9e-19 97.8 161 39.1
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 8.9e-19 97.8 161 39.1
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 1.2e-18 97.4 158 36.1
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 1.2e-18 97.4 158 36.7
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 1.2e-18 97.4 158 36.7
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 1.2e-18 97.4 158 36.7
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 1.2e-18 97.4 161 37.9
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 2.0e-18 96.7 161 36.0
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 2.0e-18 96.7 171 38.6
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 2.0e-18 96.7 158 36.1
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 2.6e-18 96.3 158 40.5
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 2.6e-18 96.3 169 36.7
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 2.6e-18 96.3 77 53.2
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 3.4e-18 95.9 158 36.7
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 3.4e-18 95.9 164 37.8
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 4.4e-18 95.5 166 37.3
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 5.8e-18 95.1 162 36.4
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 5.8e-18 95.1 162 37.0
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 9.9e-18 94.4 159 39.0
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 9.9e-18 94.4 157 38.9
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 9.9e-18 94.4 157 38.2
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 1.3e-17 94.0 158 35.4
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 1.7e-17 93.6 158 34.8
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 1.7e-17 93.6 161 36.0
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 1.7e-17 93.6 160 35.6
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 1.7e-17 93.6 161 37.3
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 1.7e-17 93.6 161 34.2
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 1.7e-17 93.6 162 35.8
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 2.2e-17 93.2 158 35.4
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 2.9e-17 92.8 162 36.4
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 2.9e-17 92.8 161 36.6
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 2.9e-17 92.8 165 33.9
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 3.7e-17 92.4 158 34.2
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 3.7e-17 92.4 160 37.5
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 3.7e-17 92.4 94 45.7
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 4.9e-17 92.0 157 36.3
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 4.9e-17 92.0 160 37.5
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 4.9e-17 92.0 167 34.7
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 4.9e-17 92.0 167 35.3
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 6.4e-17 91.7 166 38.0
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 6.4e-17 91.7 74 52.7
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 6.4e-17 91.7 163 38.7
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 8.3e-17 91.3 161 36.6
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 8.3e-17 91.3 151 37.1
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 8.3e-17 91.3 146 37.0
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 8.3e-17 91.3 157 38.2
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 8.3e-17 91.3 158 38.6
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 1.9e-16 90.1 132 39.4
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 2.4e-16 89.7 161 33.5
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 2.4e-16 89.7 155 34.2
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 3.2e-16 89.4 147 38.1
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 4.1e-16 89.0 156 35.9
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 5.4e-16 88.6 161 34.2
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 7.1e-16 88.2 161 34.8
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 9.2e-16 87.8 76 52.6
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 1.2e-15 87.4 155 37.4
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 2.7e-15 86.3 147 35.4
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 2.7e-15 86.3 155 37.4
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 3.5e-15 85.9 152 36.2
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 4.6e-15 85.5 91 42.9
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 4.6e-15 85.5 147 36.7
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 6.0e-15 85.1 157 33.1
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 1.0e-14 84.3 154 33.1
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 1.3e-14 84.0 128 38.3
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 2.3e-14 83.2 141 35.5
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.3e-14 83.2 141 35.5
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.3e-14 83.2 141 35.5
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 2.3e-14 83.2 160 32.5
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 3.0e-14 82.8 156 34.6
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 3.0e-14 82.8 133 38.3
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 8.6e-14 81.3 137 35.0
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 1.1e-13 80.9 145 33.8
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.1e-13 80.9 141 35.5
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.1e-13 80.9 145 33.8
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 1.1e-13 80.9 158 35.4
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 4.3e-13 79.0 150 37.3
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.6e-12 77.0 145 31.7
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 1.6e-12 77.0 70 48.6
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 2.8e-12 76.3 144 34.0
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 3.6e-12 75.9 183 30.6
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 4.7e-12 75.5 140 36.4
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.4e-11 73.9 122 37.7
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 1.8e-11 73.6 157 31.8
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 1.8e-11 73.6 159 33.3
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 1.8e-11 73.6 167 31.1
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 5.2e-11 72.0 161 31.7
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 6.8e-11 71.6 145 33.8
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 1.2e-10 70.9 159 30.8
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 1.5e-10 70.5 161 31.7
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 1.5e-10 70.5 157 31.8
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 2.6e-10 69.7 150 32.0
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 4.4e-10 68.9 202 26.7
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.9e-08 63.5 121 33.9


User provided reference genes

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