Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1248 Papaver somniferum HOM05D008002 ORTHO05D010148 3.9e-122 441.4 215 100.0
PSO675G9248 Papaver somniferum HOM05D008002 ORTHO05D010148 4.5e-94 348.2 216 83.3
Nn2g12628 Nelumbo nucifera HOM05D008002 ORTHO05D010148 8.3e-56 221.1 206 56.8
Nn8g40377 Nelumbo nucifera HOM05D008002 ORTHO05D010148 6.6e-53 211.5 212 53.8
TAR376G1088 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.3e-48 197.2 203 52.2
Aqoxy6G02976 Aquilegia oxysepala HOM05D008002 ORTHO05D010148 5.6e-44 181.8 222 46.8
MD05G1143100 Malus domestica HOM05D008002 ORTHO05D010148 2.6e-41 172.9 215 49.8
Prupe.8G181900 Prunus persica HOM05D008002 ORTHO05D010148 1.3e-40 170.6 214 49.1
MD10G1142900 Malus domestica HOM05D008002 ORTHO05D010148 1.7e-40 170.2 214 49.5
FAN15G1289 Fragaria x ananassa HOM05D008002 ORTHO05D010148 2.9e-40 169.5 205 48.3
RcHm_v2.0_Chr6g0281201 Rosa chinensis HOM05D008002 ORTHO05D010148 2.9e-40 169.5 209 46.9
FAN27G2383 Fragaria x ananassa HOM05D008002 ORTHO05D010148 3.7e-40 169.1 194 49.5
FvH4_2g17020 Fragaria vesca HOM05D008002 ORTHO05D010148 6.4e-40 168.3 194 49.0
FAN24G1487 Fragaria x ananassa HOM05D008002 ORTHO05D010148 6.4e-40 168.3 194 49.0
Sed0014792 Sechium edule HOM05D008002 ORTHO05D010148 1.1e-39 167.5 214 45.8
Actinidia17988 Actinidia chinensis HOM05D008002 ORTHO05D010148 2.4e-39 166.4 188 48.4
QL11p056798 Quercus lobata HOM05D000114 ORTHO05D009898 3.2e-39 166.0 228 45.2
Actinidia20583 Actinidia chinensis HOM05D008002 ORTHO05D010148 5.4e-39 165.2 206 47.6
CANSAT25G0111 Cannabis sativa HOM05D008002 ORTHO05D010148 7.1e-39 164.9 212 48.1
CiPaw.05G094700 Carya illinoinensis HOM05D008002 ORTHO05D010148 9.2e-39 164.5 190 49.5
Sc08g0002060 Simmondsia chinensis HOM05D008002 ORTHO05D010148 1.2e-38 164.1 187 48.7
Eucgr.I01542 Eucalyptus grandis HOM05D008002 ORTHO05D010148 1.3e-37 160.6 164 51.8
MELO3C015697.2 Cucumis melo HOM05D008002 ORTHO05D010148 2.3e-37 159.8 162 50.6
CsaV3_7G002100 Cucumis sativus L. HOM05D008002 ORTHO05D010148 2.3e-37 159.8 181 47.5
Gorai.012G138300 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.3e-37 159.8 214 44.9
Hund00100 Selenicereus undatus HOM05D008002 ORTHO05D010148 2.3e-37 159.8 206 44.2
Thecc.02G147800 Theobroma cacao HOM05D008002 ORTHO05D010148 5.1e-37 158.7 159 53.5
SEGI_35818 Sequoiadendron giganteum HOM05D008002 ORTHO05D010148 8.6e-37 157.9 200 47.5
GSVIVG01023858001 Vitis vinifera HOM05D008002 ORTHO05D010148 1.1e-36 157.5 186 47.3
Gohir.A04G111300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 1.9e-36 156.8 214 44.4
Duzib132G1147 Durio zibethinus HOM05D008002 ORTHO05D010148 4.3e-36 155.6 200 45.0
Gohir.D04G151600 Gossypium hirsutum HOM05D008002 ORTHO05D010148 4.3e-36 155.6 214 43.9
Haze_01959 Corylus avellana HOM05D008002 ORTHO05D010148 5.6e-36 155.2 204 47.5
TWI75G0824 Tripterygium wilfordii HOM05D008002 ORTHO05D010148 5.6e-36 155.2 162 50.0
Duzib248G0441 Durio zibethinus HOM05D008002 ORTHO05D010148 9.5e-36 154.5 173 48.6
Rhsim11G0198500 Rhododendron simsii HOM05D008002 ORTHO05D010148 9.5e-36 154.5 191 44.0
Cfa005392 Carpinus fangiana HOM05D008002 ORTHO05D010148 1.2e-35 154.1 196 44.9
Dinv14183 Davidia involucrata HOM05D008002 ORTHO05D010148 2.1e-35 153.3 166 49.4
CiPaw.06G114200 Carya illinoinensis HOM05D008002 ORTHO05D010148 2.8e-35 152.9 208 47.1
Gohir.D13G057750 Gossypium hirsutum HOM05D008002 ORTHO05D010148 6.2e-35 151.8 211 44.1
Haze_01969 Corylus avellana HOM05D008002 ORTHO05D010148 8.1e-35 151.4 176 49.4
Gohir.D02G193300 Gossypium hirsutum HOM05D008002 ORTHO05D010148 8.1e-35 151.4 218 44.0
Potri.009G169400 Populus trichocarpa HOM05D008002 ORTHO05D010148 1.4e-34 150.6 162 50.0
Gorai.013G065000 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.3e-34 149.8 211 43.1
Gohir.A03G170200 Gossypium hirsutum HOM05D008002 ORTHO05D010148 8.9e-34 147.9 218 42.7
Atru.chr5.3576 Acer truncatum HOM05D008002 ORTHO05D010148 1.2e-33 147.5 208 42.8
Sabra04G0140100 Salix brachista HOM05D008002 ORTHO05D010148 1.5e-33 147.1 210 45.2
Gorai.005G216100 Gossypium raimondii HOM05D008002 ORTHO05D010148 2.0e-33 146.7 218 42.7
Potri.004G208200 Populus trichocarpa HOM05D008002 ORTHO05D010148 2.0e-33 146.7 200 45.5
PGR142G3621 Punica granatum HOM05D008002 ORTHO05D010148 2.6e-33 146.4 169 48.5
Lsat_1_v5_gn_3_48401 Lactuca sativa HOM05D008002 ORTHO05D010148 3.4e-33 146.0 162 48.1
Oeu006116.1 Olea europaea HOM05D008002 ORTHO05D010148 7.6e-33 144.8 211 43.1
Zm00001eb035270 Zea mays HOM05D008002 ORTHO05D010148 9.9e-33 144.4 177 43.5
Thhalv10027398m.g Eutrema salsugineum HOM05D008002 ORTHO05D010148 5.4e-31 138.7 162 46.3
Carub.0007s0013 Capsella rubella HOM05D008002 ORTHO05D010148 1.6e-30 137.1 162 45.1
Sp7g37530 Schrenkiella parvula HOM05D008002 ORTHO05D010148 4.6e-30 135.6 152 46.7
Ciclev10029829m.g Citrus clementina HOM05D008002 ORTHO05D010148 1.7e-29 133.7 202 42.6
AT4G38213 Arabidopsis thaliana HOM05D008002 ORTHO05D010148 3.0e-29 132.9 198 39.9
CDE10G0514 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 1.9e-28 130.2 180 43.3
Eucgr.H05000 Eucalyptus grandis HOM05D008002 ORTHO05D010148 7.3e-28 128.3 186 39.2
COL.COLO4_03847 Corchorus olitorius HOM05D008002 ORTHO05D010148 1.6e-27 127.1 202 41.1
HPP92_007470 Vanilla planifolia HOM05D008002 ORTHO05D010148 2.1e-27 126.7 163 45.4
MBI17_g13390_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 1.4e-26 124.0 115 54.8
ClCG02G003270 Citrullus lanatus HOM05D008002 ORTHO05D010148 1.8e-26 123.6 125 50.4
Os08g0512100 Oryza sativa ssp. japonica HOM05D008002 ORTHO05D010148 4.0e-26 122.5 179 41.3
CSS0003373 Camellia sinensis var. sinensis HOM05D008002 ORTHO05D010148 2.6e-25 119.8 126 50.0
ATR0763G180 Amborella trichopoda HOM05D008002 ORTHO05D010148 5.4e-23 112.1 122 50.8
HanXRQChr15g0490081 Helianthus annuus HOM05D008002 ORTHO05D010148 2.7e-22 109.8 125 44.8
MBI01_g17256_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 7.8e-22 108.2 104 54.8
TAR628G1479 Trochodendron aralioides HOM05D008002 ORTHO05D010148 1.5e-20 104.0 106 51.9
MBI12_g13710_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 1.3e-19 100.9 106 51.9
MBI03_g24838_MAGBIO Magnolia biondii HOM05D008002 ORTHO05D010148 2.8e-19 99.8 105 51.4
HanXRQChr15g0479771 Helianthus annuus HOM05D008002 ORTHO05D010148 5.3e-18 95.5 126 42.1
AL7G10120 Arabidopsis lyrata HOM05D008002 ORTHO05D010148 6.9e-18 95.1 139 41.0
CARHR293990 Cardamine hirsuta HOM05D008002 ORTHO05D010148 9.9e-17 91.3 97 47.4
MBI18_g48147_MAGBIO Magnolia biondii HOM05D002560 ORTHO05D022477 9.9e-17 91.3 107 50.5
CDE10G0941 Ceratophyllum demersum HOM05D008002 ORTHO05D010148 3.2e-15 86.3 104 43.3
Gohir.A13G064166 Gossypium hirsutum HOM05D008002 ORTHO05D010148 2.9e-08 63.2 75 45.3


User provided reference genes

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