Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G1053 Papaver somniferum HOM05D010555 ORTHO05D011546 1.1e-124 449.9 224 100.0
PSO541G1881 Papaver somniferum HOM05D010555 ORTHO05D011546 2.1e-54 216.5 144 72.9
PSO541G4626 Papaver somniferum HOM05D010555 ORTHO05D011546 3.4e-52 209.1 144 71.5
PSO384G0835 Papaver somniferum HOM05D010555 ORTHO05D011546 7.9e-41 171.4 138 63.8
PSO675G0294 Papaver somniferum HOM05D010555 ORTHO05D011546 7.9e-41 171.4 146 63.0
PSO541G5193 Papaver somniferum HOM05D010555 ORTHO05D011546 1.7e-40 170.2 151 59.6
PSO541G2283 Papaver somniferum HOM05D010555 ORTHO05D011546 1.1e-39 167.5 153 58.8
PSO675G6490 Papaver somniferum HOM05D010555 ORTHO05D011546 7.4e-39 164.9 142 60.6
PSO675G0315 Papaver somniferum HOM05D010555 ORTHO05D011546 8.1e-38 161.4 153 57.5
PSO675G3443 Papaver somniferum HOM05D010555 ORTHO05D011546 8.1e-38 161.4 146 60.3
PSO210G2139 Papaver somniferum HOM05D010555 ORTHO05D011546 6.4e-35 151.8 152 53.3
PSO210G5303 Papaver somniferum HOM05D010555 ORTHO05D011546 2.4e-34 149.8 149 52.3
PSO541G2922 Papaver somniferum HOM05D010555 ORTHO05D011546 1.1e-31 141.0 99 71.7
PSO210G6188 Papaver somniferum HOM05D010555 ORTHO05D011546 1.1e-29 134.4 130 53.8
PSO339G4366 Papaver somniferum HOM05D010555 ORTHO05D011546 4.2e-26 122.5 113 54.0
PSO210G2635 Papaver somniferum HOM05D010555 ORTHO05D011546 8.2e-22 108.2 111 49.5
PSO675G7631 Papaver somniferum HOM05D010555 ORTHO05D011546 1.0e-19 101.3 87 59.8
Pp3c12_24810 Physcomitrium patens HOM05D003065 ORTHO05D011546 1.8e-16 90.5 152 34.9
PSO339G3249 Papaver somniferum HOM05D010555 ORTHO05D011546 5.1e-16 89.0 103 44.7
AagrBONN_evm.TU.Sc2ySwM_368.999 Anthoceros agrestis HOM05D003065 ORTHO05D011546 8.7e-16 88.2 156 32.7
Mapoly0065s0011 Marchantia polymorpha HOM05D003065 ORTHO05D011546 1.1e-15 87.8 144 34.0
PSO541G4919 Papaver somniferum HOM05D010555 ORTHO05D011546 3.7e-14 82.8 145 36.6
Pp3c3_37060 Physcomitrium patens HOM05D003065 ORTHO05D011546 1.4e-13 80.9 141 34.8
CBR_g9048 Chara braunii HOM05D003065 ORTHO05D011546 6.9e-13 78.6 152 31.6
PSO210G7509 Papaver somniferum HOM05D010555 ORTHO05D011546 1.5e-12 77.4 130 37.7
Mapoly0032s0039 Marchantia polymorpha HOM05D003065 ORTHO05D011546 2.0e-12 77.0 141 36.2
HanXRQChr17g0560931 Helianthus annuus HOM05D003065 ORTHO05D003802 7.2e-10 68.6 142 31.0
Gorai.013G071000 Gossypium raimondii HOM05D003065 ORTHO05D003802 9.4e-10 68.2 139 32.4
DCAR_012955 Daucus carota HOM05D003065 ORTHO05D003802 1.6e-09 67.4 142 31.0
A09p67510 Brassica napus HOM05D000226 ORTHO05D000142 2.1e-09 67.0 188 28.7
Gohir.A13G059500 Gossypium hirsutum HOM05D003065 ORTHO05D003802 2.1e-09 67.0 139 31.7
Gohir.D13G062500 Gossypium hirsutum HOM05D003065 ORTHO05D003802 2.1e-09 67.0 139 31.7
Aa31LG1G19430 Aethionema arabicum HOM05D003065 ORTHO05D003802 3.6e-09 66.2 139 30.2
BraA09t42082Z Brassica rapa HOM05D003065 ORTHO05D003802 3.6e-09 66.2 141 31.2
Lj8A123T53 Lonicera japonica HOM05D003065 ORTHO05D003802 3.6e-09 66.2 142 31.0
SMO198G0027 Selaginella moellendorffii HOM05D003065 ORTHO05D011546 3.6e-09 66.2 170 27.6
Atru.chr6.3154 Acer truncatum HOM05D003065 ORTHO05D003802 4.6e-09 65.9 139 30.2
GSVIVG01030621001 Vitis vinifera HOM05D003065 ORTHO05D003802 4.6e-09 65.9 139 30.9
Hma1.2p1_0613F.1_g189150 Hydrangea macrophylla HOM05D003065 ORTHO05D003802 6.1e-09 65.5 147 29.9
Lsat_1_v5_gn_8_129420 Lactuca sativa HOM05D003065 ORTHO05D003802 1.0e-08 64.7 142 30.3
MCO04G316 Micromonas commoda HOM05D003065 ORTHO05D011546 1.0e-08 64.7 164 28.7
PSO675G8127 Papaver somniferum HOM05D003065 ORTHO05D003802 1.0e-08 64.7 136 33.8
AL4G27732 Arabidopsis lyrata HOM05D003065 ORTHO05D003802 1.4e-08 64.3 153 30.1
BcaC07g42139 Brassica carinata HOM05D003065 ORTHO05D003802 1.8e-08 63.9 138 29.7
CARHR126160 Cardamine hirsuta HOM05D003065 ORTHO05D003802 1.8e-08 63.9 153 29.4
CiPaw.04G117500 Carya illinoinensis HOM05D003065 ORTHO05D003802 1.8e-08 63.9 139 30.2
Sp1g04125 Schrenkiella parvula HOM05D003065 ORTHO05D003802 1.8e-08 63.9 136 30.1
AL1G15050 Arabidopsis lyrata HOM05D003065 ORTHO05D003802 2.3e-08 63.5 139 29.5
AT1G05270 Arabidopsis thaliana HOM05D003065 ORTHO05D003802 2.3e-08 63.5 139 29.5
AT2G32340 Arabidopsis thaliana HOM05D003065 ORTHO05D003802 2.3e-08 63.5 153 28.1
C08p51790 Brassica napus HOM05D000310 ORTHO05D003802 2.3e-08 63.5 139 29.5
BolC8t52711H Brassica oleracea HOM05D003065 ORTHO05D003802 2.3e-08 63.5 139 29.5
Carub.0001s0456 Capsella rubella HOM05D003065 ORTHO05D003802 2.3e-08 63.5 139 29.5
Dinv18529 Davidia involucrata HOM05D003065 ORTHO05D003802 2.3e-08 63.5 139 30.2
MD09G1105400 Malus domestica HOM05D003065 ORTHO05D003802 2.3e-08 63.5 139 30.2
QL08p033752 Quercus lobata HOM05D003065 ORTHO05D003802 2.3e-08 63.5 137 30.7
Thecc.02G162000 Theobroma cacao HOM05D003065 ORTHO05D003802 2.3e-08 63.5 139 30.2
unitig_21.g20057 Utricularia gibba HOM05D003065 ORTHO05D003802 2.3e-08 63.5 139 28.8
PSO541G1708 Papaver somniferum HOM05D003065 ORTHO05D003802 3.0e-08 63.2 136 33.1
Sp4g14710 Schrenkiella parvula HOM05D003065 ORTHO05D003802 3.0e-08 63.2 153 28.8
CANSAT64G1715 Cannabis sativa HOM05D003065 ORTHO05D003802 3.9e-08 62.8 139 28.8
Thhalv10017846m.g Eutrema salsugineum HOM05D003065 ORTHO05D003802 3.9e-08 62.8 153 30.1
MD17G1093000 Malus domestica HOM05D003065 ORTHO05D003802 3.9e-08 62.8 139 29.5
Nn1g07002 Nelumbo nucifera HOM05D003065 ORTHO05D003802 3.9e-08 62.8 139 28.8
THA.LOC104827382 Tarenaya hassleriana HOM05D003065 ORTHO05D003802 3.9e-08 62.8 139 29.5
ClCG02G008460 Citrullus lanatus HOM05D003065 ORTHO05D003802 5.1e-08 62.4 139 30.2
Cc05_g05030 Coffea canephora HOM05D003065 ORTHO05D003802 5.1e-08 62.4 139 31.7
COL.COLO4_12981 Corchorus olitorius HOM05D003065 ORTHO05D003802 5.1e-08 62.4 139 30.2
Duzib248G1274 Durio zibethinus HOM05D003065 ORTHO05D003802 5.1e-08 62.4 139 30.2
Nn1g03660 Nelumbo nucifera HOM05D003065 ORTHO05D003802 5.1e-08 62.4 142 29.6
Sabra17G0025600 Salix brachista HOM05D003065 ORTHO05D003802 5.1e-08 62.4 139 30.2
Cpa.g.sc8.233 Carica papaya HOM05D003065 ORTHO05D003802 6.7e-08 62.0 139 28.8
Ciclev10015457m.g Citrus clementina HOM05D003065 ORTHO05D003802 6.7e-08 62.0 139 28.8
Nitab4.5_0006207g0040 Nicotiana tabacum HOM05D003065 ORTHO05D003802 6.7e-08 62.0 130 32.3
Pp3c16_8270 Physcomitrium patens HOM05D003065 ORTHO05D003802 6.7e-08 62.0 149 30.2
Prupe.3G220000 Prunus persica HOM05D003065 ORTHO05D003802 6.7e-08 62.0 139 28.8
SGA_v2.0_scaffold49G18335 Striga asiatica HOM05D003065 ORTHO05D003802 6.7e-08 62.0 136 30.9
TWI36G1576 Tripterygium wilfordii HOM05D003065 ORTHO05D003802 6.7e-08 62.0 136 30.9
CAN.G80.21 Capsicum annuum HOM05D003065 ORTHO05D003802 8.8e-08 61.6 139 31.7
Cfa014437 Carpinus fangiana HOM05D003065 ORTHO05D003802 8.8e-08 61.6 139 29.5
Haze_12895 Corylus avellana HOM05D003065 ORTHO05D003802 8.8e-08 61.6 139 29.5
RcHm_v2.0_Chr2g0160041 Rosa chinensis HOM05D003065 ORTHO05D003802 8.8e-08 61.6 139 28.8
PGSC0003DMG400024333 Solanum tuberosum HOM05D003065 ORTHO05D003802 8.8e-08 61.6 139 30.9
Thhalv10007929m.g Eutrema salsugineum HOM05D003065 ORTHO05D003802 1.1e-07 61.2 139 28.8
Thhalv10017883m.g Eutrema salsugineum HOM05D003065 ORTHO05D003802 1.1e-07 61.2 136 30.1
Lalb_Chr03g0028881 Lupinus albus HOM05D003065 ORTHO05D003802 1.1e-07 61.2 136 31.6
Psat7g195560 Pisum sativum HOM05D003065 ORTHO05D003802 1.1e-07 61.2 136 30.9
Solyc12g005780.3 Solanum lycopersicum HOM05D003065 ORTHO05D003802 1.1e-07 61.2 139 30.9
Sopen12g001710 Solanum pennellii HOM05D003065 ORTHO05D003802 1.1e-07 61.2 139 30.9
arahy.Tifrunner.gnm1.ann1.Y3QZTF Arachis hypogaea HOM05D003065 ORTHO05D003802 1.5e-07 60.8 136 30.9
CiPaw.03G162600 Carya illinoinensis HOM05D003065 ORTHO05D003802 1.5e-07 60.8 140 30.7
Migut.H01221 Erythranthe guttata HOM05D003065 ORTHO05D003802 1.5e-07 60.8 139 29.5
Glyma.12G101300 Glycine max HOM05D003065 ORTHO05D003802 1.5e-07 60.8 136 30.9
Phvul.011G106000 Phaseolus vulgaris HOM05D003065 ORTHO05D003802 1.5e-07 60.8 136 30.9
VMungo1127G1760 Vigna mungo HOM05D003065 ORTHO05D003802 1.5e-07 60.8 136 30.9
AL125U10034 Arabidopsis lyrata HOM05D003065 ORTHO05D003802 2.0e-07 60.5 147 30.6
BcaC07g36852 Brassica carinata HOM05D003065 ORTHO05D003802 2.0e-07 60.5 139 28.8
Carub.0004s1369 Capsella rubella HOM05D003065 ORTHO05D003802 2.0e-07 60.5 137 28.5
Lalb_Chr01g0005571 Lupinus albus HOM05D003065 ORTHO05D003802 2.0e-07 60.5 139 30.2
SalBow1G7597 Salvia bowleyana HOM05D003065 ORTHO05D003802 2.0e-07 60.5 142 30.3
BcaC02g11329 Brassica carinata HOM05D003065 ORTHO05D003802 2.6e-07 60.1 153 29.4
Lj3g0025078 Lotus japonicus HOM05D003065 ORTHO05D003802 2.6e-07 60.1 138 26.8
Nitab4.5_0000631g0050 Nicotiana tabacum HOM05D003065 ORTHO05D003802 2.6e-07 60.1 136 30.9
PGR142G3240 Punica granatum HOM05D003065 ORTHO05D003802 2.6e-07 60.1 139 28.1
Sc12g0002370 Simmondsia chinensis HOM05D003065 ORTHO05D003802 2.6e-07 60.1 139 28.8
CARHR004740 Cardamine hirsuta HOM05D003065 ORTHO05D003802 3.3e-07 59.7 139 28.8
Potri.017G038500 Populus trichocarpa HOM05D003065 ORTHO05D003802 4.4e-07 59.3 139 28.8
FvH4_6g43520 Fragaria vesca HOM05D003065 ORTHO05D003802 5.7e-07 58.9 139 27.3
FAN02G0663 Fragaria x ananassa HOM05D003065 ORTHO05D003802 5.7e-07 58.9 139 27.3
FAN09G1506 Fragaria x ananassa HOM05D003065 ORTHO05D003802 5.7e-07 58.9 139 27.3
FAN14G1636 Fragaria x ananassa HOM05D003065 ORTHO05D003802 5.7e-07 58.9 139 27.3
TWI75G1157 Tripterygium wilfordii HOM05D003065 ORTHO05D003802 5.7e-07 58.9 138 27.5
ECA233G0914 Erigeron canadensis HOM05D003065 ORTHO05D003802 7.4e-07 58.5 137 28.5
THA.LOC104800983 Tarenaya hassleriana HOM05D003065 ORTHO05D003802 7.4e-07 58.5 139 28.8
AUR62025067 Chenopodium quinoa HOM05D003065 ORTHO05D003802 9.7e-07 58.2 139 30.2
CsaV3_2G035170 Cucumis sativus L. HOM05D003065 ORTHO05D003802 9.7e-07 58.2 139 28.1
Peaxi162Scf00007g01221 Petunia axillaris HOM05D003065 ORTHO05D003802 9.7e-07 58.2 139 28.8
Sabra07G0098600 Salix brachista HOM05D003065 ORTHO05D003802 9.7e-07 58.2 137 29.9
Potri.007G121900 Populus trichocarpa HOM05D003065 ORTHO05D003802 1.3e-06 57.8 137 29.9
Aqoxy4G02067 Aquilegia oxysepala HOM05D003065 ORTHO05D003802 1.7e-06 57.4 142 28.2
MELO3C019237.2 Cucumis melo HOM05D003065 ORTHO05D003802 1.7e-06 57.4 139 28.1
Lj3g0014705 Lotus japonicus HOM05D003065 ORTHO05D003802 1.7e-06 57.4 136 30.1
Manes.13G072700 Manihot esculenta HOM05D003065 ORTHO05D003802 1.7e-06 57.4 139 28.8
Nitab4.5_0001176g0140 Nicotiana tabacum HOM05D003065 ORTHO05D003802 1.7e-06 57.4 139 28.1
Nitab4.5_0005894g0020 Nicotiana tabacum HOM05D003065 ORTHO05D003802 1.7e-06 57.4 139 28.1
Os05g0499500 Oryza sativa ssp. japonica HOM05D003065 ORTHO05D003802 2.2e-06 57.0 155 25.2
MSTRG.14153 Avicennia marina HOM05D003065 ORTHO05D003802 2.8e-06 56.6 138 29.0
Sed0000552 Sechium edule HOM05D003065 ORTHO05D003802 2.8e-06 56.6 139 27.3
Solyc07g052560.3 Solanum lycopersicum HOM05D003065 ORTHO05D003802 2.8e-06 56.6 139 28.1
Zm00001eb291870 Zea mays HOM05D003065 ORTHO05D003802 3.7e-06 56.2 139 26.6
Ah.01g014620 Amaranthus hybridus HOM05D003065 ORTHO05D003802 4.8e-06 55.8 142 28.2
EL10Ac9g20661 Beta vulgaris HOM05D003065 ORTHO05D003802 6.3e-06 55.5 139 29.5
MSTRG.12287 Avicennia marina HOM05D003065 ORTHO05D003802 8.2e-06 55.1 136 27.2


User provided reference genes

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