Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0804 Papaver somniferum HOM05D004728 ORTHO05D002375 1.0e-87 327.0 208 100.0
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 9.4e-73 277.3 196 85.2
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 8.4e-13 78.2 122 49.2
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 1.4e-12 77.4 122 46.7
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 7.1e-12 75.1 194 43.3
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 2.1e-11 73.6 147 48.3
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 6.0e-11 72.0 122 46.7
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.3e-10 70.9 189 41.3
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.8e-10 70.5 189 41.3
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.3e-10 70.1 189 40.7
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 3.0e-10 69.7 118 50.8
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 3.9e-10 69.3 174 39.1
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 1.1e-09 67.8 109 39.4
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.5e-09 67.4 189 39.7
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.9e-09 67.0 122 50.0
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 4.3e-09 65.9 140 44.3
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 5.6e-09 65.5 151 40.4
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 1.6e-08 63.9 116 48.3
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 8.1e-08 61.6 189 39.7
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 1.1e-07 61.2 154 39.6
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 1.1e-07 61.2 118 46.6
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.4e-07 60.8 117 45.3
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.8e-07 60.5 135 43.0
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.4e-07 60.1 115 47.8
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 3.1e-07 59.7 159 40.9
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 5.3e-07 58.9 114 47.4
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.9e-07 58.5 120 42.5
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 9.0e-07 58.2 188 39.4
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 9.0e-07 58.2 179 38.0
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.2e-06 57.8 135 44.4
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 2.0e-06 57.0 118 29.7
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 3.4e-06 56.2 193 38.9
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 4.5e-06 55.8 135 41.5
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.5e-06 55.8 183 37.7
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 4.5e-06 55.8 80 42.5
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 5.8e-06 55.5 101 53.5
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 7.6e-06 55.1 157 29.9
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 9.9e-06 54.7 105 47.6
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 9.9e-06 54.7 157 37.6


User provided reference genes

Program Settings