Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 1.1e-139 500.0 248 100.0
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 2.9e-137 491.9 248 98.4
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.4e-126 456.4 249 87.6
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 1.3e-124 449.9 249 86.7
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.7e-124 449.5 249 85.5
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 2.4e-123 445.7 248 85.5
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 3.4e-122 441.8 248 85.1
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 3.4e-122 441.8 248 85.1
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 3.4e-122 441.8 248 84.7
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 4.5e-122 441.4 249 84.3
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 7.7e-122 440.7 248 85.1
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 1.0e-121 440.3 260 82.7
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 2.2e-121 439.1 250 85.2
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 2.2e-121 439.1 250 85.2
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 2.2e-121 439.1 255 84.3
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 5.0e-121 438.0 249 83.1
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 5.0e-121 438.0 249 83.1
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 1.4e-120 436.4 250 83.2
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 1.9e-120 436.0 250 82.8
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 2.5e-120 435.6 249 83.5
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 5.5e-120 434.5 251 82.5
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 5.5e-120 434.5 250 82.4
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.6e-119 433.0 275 77.1
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 2.1e-119 432.6 249 83.5
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 2.1e-119 432.6 249 82.7
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 2.7e-119 432.2 250 83.2
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 3.6e-119 431.8 250 82.0
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 4.7e-119 431.4 249 83.1
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 6.1e-119 431.0 251 82.5
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 6.1e-119 431.0 251 82.5
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 6.1e-119 431.0 250 81.6
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 1.0e-118 430.3 250 83.6
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 1.0e-118 430.3 249 83.1
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.0e-118 430.3 249 83.1
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.4e-118 429.9 248 82.7
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 1.8e-118 429.5 249 82.7
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 1.8e-118 429.5 249 83.5
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 1.8e-118 429.5 249 82.7
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 2.3e-118 429.1 249 83.5
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 3.0e-118 428.7 249 82.7
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 3.9e-118 428.3 249 82.7
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 5.2e-118 427.9 249 82.7
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 6.7e-118 427.6 251 82.5
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 6.7e-118 427.6 249 81.9
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 8.8e-118 427.2 248 83.5
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 1.1e-117 426.8 251 80.9
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 1.1e-117 426.8 249 81.5
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 1.1e-117 426.8 249 82.3
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 1.5e-117 426.4 250 82.0
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 4.4e-117 424.9 253 81.0
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 5.7e-117 424.5 249 81.5
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 5.7e-117 424.5 250 81.6
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 7.4e-117 424.1 249 81.5
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 9.7e-117 423.7 254 80.3
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 2.2e-116 422.5 249 80.7
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 3.7e-116 421.8 252 81.0
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 3.7e-116 421.8 253 80.2
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 4.8e-116 421.4 249 80.7
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 6.3e-116 421.0 249 80.7
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 8.2e-116 420.6 249 80.7
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 1.1e-115 420.2 250 79.6
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 1.1e-115 420.2 249 80.3
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 1.1e-115 420.2 254 80.3
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 1.1e-115 420.2 249 81.5
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 1.4e-115 419.9 251 80.9
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 1.8e-115 419.5 249 80.7
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 1.8e-115 419.5 249 79.1
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 2.4e-115 419.1 276 75.0
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 4.1e-115 418.3 252 80.6
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 5.3e-115 417.9 249 80.3
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 1.6e-114 416.4 234 84.6
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 1.6e-114 416.4 252 80.2
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 5.9e-114 414.5 271 76.0
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 5.9e-114 414.5 255 79.2
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 5.9e-114 414.5 249 79.5
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 1.3e-113 413.3 250 78.4
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 5.0e-113 411.4 247 78.9
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 9.4e-112 407.1 247 77.3
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 1.2e-111 406.8 290 71.0
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 3.0e-110 402.1 252 79.0
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 8.8e-110 400.6 252 78.6
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 1.2e-109 400.2 222 85.1
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 2.6e-109 399.1 222 85.6
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 2.6e-109 399.1 231 84.0
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 2.6e-109 399.1 231 84.0
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 4.8e-108 394.8 247 78.9
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 6.3e-108 394.4 247 75.3
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 9.1e-107 390.6 249 77.5
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 2.2e-105 386.0 254 76.4
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 4.2e-104 381.7 248 76.2
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 3.0e-102 375.6 251 72.9
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 5.7e-101 371.3 249 74.7
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 8.3e-100 367.5 221 78.3
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 8.3e-100 367.5 248 71.0
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 4.1e-99 365.2 251 69.7
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 5.9e-98 361.3 208 84.6
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 1.0e-97 360.5 449 47.2
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 2.9e-97 359.0 250 72.4
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 6.6e-97 357.8 219 79.0
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 1.1e-96 357.1 251 73.3
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 3.6e-95 352.1 211 80.1
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 1.0e-94 350.5 234 70.5
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 1.0e-94 350.5 247 68.4
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.4e-94 350.1 253 71.9
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 2.3e-94 349.4 279 65.9
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 2.3e-94 349.4 249 72.3
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 2.4e-91 339.3 207 78.3
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 2.9e-89 332.4 190 84.2
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 8.6e-89 330.9 248 68.1
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 5.6e-88 328.2 268 64.9
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 7.3e-88 327.8 242 68.6
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 8.0e-87 324.3 195 79.5
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 8.9e-86 320.9 249 66.3
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 4.1e-83 312.0 249 61.4
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 2.0e-82 309.7 278 62.6
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 1.8e-78 296.6 335 53.7
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 2.0e-77 293.1 202 73.3
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 4.4e-77 292.0 208 70.2
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 2.7e-74 282.7 207 69.1
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 3.5e-74 282.3 157 86.6
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 6.0e-74 281.6 249 54.2
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 7.8e-74 281.2 248 61.7
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 6.2e-71 271.6 157 79.6
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 9.9e-69 264.2 228 54.4
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 9.2e-67 257.7 231 55.0
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 6.6e-65 251.5 283 50.9
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 8.6e-65 251.1 170 72.9
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.8e-60 235.7 141 83.0
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 4.9e-60 235.3 145 75.2
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 6.0e-58 228.4 206 58.7
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 1.0e-57 227.6 157 72.6
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 1.8e-46 190.3 116 77.6
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 7.6e-45 184.9 115 77.4
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 3.7e-39 166.0 129 68.2
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 4.9e-36 155.6 91 79.1
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 2.5e-35 153.3 95 71.6
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 1.5e-32 144.1 174 48.3
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.4e-30 137.5 248 40.3
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 6.9e-30 135.2 94 71.3
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 1.3e-15 87.8 51 78.4


User provided reference genes

Program Settings