Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0643 Papaver somniferum HOM05D005644 ORTHO05D007092 4.4e-109 397.9 192 100.0
PSO675G1163 Papaver somniferum HOM05D005644 ORTHO05D007092 3.5e-106 388.3 192 97.9
Nn1g04949 Nelumbo nucifera HOM05D005644 ORTHO05D007092 9.2e-99 363.6 193 89.1
Dinv39995 Davidia involucrata HOM05D005644 ORTHO05D007092 3.9e-97 358.2 192 87.5
TAR101G0001 Trochodendron aralioides HOM05D005644 ORTHO05D007092 3.9e-97 358.2 193 88.1
TWI73G0320 Tripterygium wilfordii HOM05D005644 ORTHO05D007092 2.5e-96 355.5 193 86.0
Manes.02G095200 Manihot esculenta HOM05D005644 ORTHO05D007092 3.3e-96 355.1 193 86.0
Duzib264G1010 Durio zibethinus HOM05D005644 ORTHO05D007092 4.3e-96 354.8 193 86.0
Cc07_g09670 Coffea canephora HOM05D005644 ORTHO05D007092 7.3e-96 354.0 192 87.0
Gohir.A02G166400 Gossypium hirsutum HOM05D005644 ORTHO05D007092 7.3e-96 354.0 193 85.5
GSVIVG01018941001 Vitis vinifera HOM05D005644 ORTHO05D007092 7.3e-96 354.0 193 88.1
Potri.005G121700 Populus trichocarpa HOM05D005644 ORTHO05D007092 9.6e-96 353.6 193 85.5
Aqoxy6G01133 Aquilegia oxysepala HOM05D005644 ORTHO05D007092 1.6e-95 352.8 192 86.5
Gohir.D03G013600 Gossypium hirsutum HOM05D005644 ORTHO05D007092 2.1e-95 352.4 193 85.0
Gorai.003G013900 Gossypium raimondii HOM05D005644 ORTHO05D007092 2.1e-95 352.4 193 85.0
SalBow5G1882 Salvia bowleyana HOM05D005644 ORTHO05D007092 4.7e-95 351.3 192 85.9
Thecc.01G033400 Theobroma cacao HOM05D005644 ORTHO05D007092 1.1e-94 350.1 193 85.0
Oeu050374.1 Olea europaea HOM05D005644 ORTHO05D007092 1.4e-94 349.7 192 85.4
Prupe.7G156300 Prunus persica HOM05D005644 ORTHO05D007092 1.4e-94 349.7 193 86.0
Lalb_Chr09g0333481 Lupinus albus HOM05D005644 ORTHO05D007092 2.4e-94 349.0 191 85.3
Phvul.003G254800 Phaseolus vulgaris HOM05D005644 ORTHO05D007092 2.4e-94 349.0 191 86.4
Migut.L00368 Erythranthe guttata HOM05D005644 ORTHO05D007092 4.0e-94 348.2 192 85.9
Migut.L00376 Erythranthe guttata HOM05D005644 ORTHO05D007092 4.0e-94 348.2 192 85.9
Glyma.16G138200 Glycine max HOM05D005644 ORTHO05D007092 4.0e-94 348.2 191 85.9
vmacro17823 Vaccinium macrocarpon HOM05D005644 ORTHO05D007092 4.0e-94 348.2 194 86.1
MSTRG.3592 Avicennia marina HOM05D005644 ORTHO05D007092 6.9e-94 347.4 192 84.4
Manes.01G136400 Manihot esculenta HOM05D005644 ORTHO05D007092 1.2e-93 346.7 193 83.9
SGA_v2.0_scaffold44G16541 Striga asiatica HOM05D005644 ORTHO05D007092 1.2e-93 346.7 192 84.9
arahy.Tifrunner.gnm1.ann1.59MT2Q Arachis hypogaea HOM05D005644 ORTHO05D007092 1.5e-93 346.3 191 85.3
MELO3C026580.2 Cucumis melo HOM05D005644 ORTHO05D007092 1.5e-93 346.3 193 85.0
Potri.007G023500 Populus trichocarpa HOM05D005644 ORTHO05D007092 1.5e-93 346.3 193 84.5
Ciclev10022394m.g Citrus clementina HOM05D005644 ORTHO05D007092 2.6e-93 345.5 193 83.4
CsaV3_3G042790 Cucumis sativus L. HOM05D005644 ORTHO05D007092 2.6e-93 345.5 193 85.0
QL06p046522 Quercus lobata HOM05D005644 ORTHO05D007092 2.6e-93 345.5 192 83.9
arahy.Tifrunner.gnm1.ann1.SR5TCU Arachis hypogaea HOM05D005644 ORTHO05D007092 5.8e-93 344.4 191 84.8
Lj2A454T58 Lonicera japonica HOM05D005644 ORTHO05D007092 5.8e-93 344.4 193 85.5
MD02G1145400 Malus domestica HOM05D005644 ORTHO05D007092 9.9e-93 343.6 193 83.9
Psat4g094240 Pisum sativum HOM05D005644 ORTHO05D007092 9.9e-93 343.6 191 84.3
Ca_22319_v3 Cicer arietinum L. HOM05D005644 ORTHO05D007092 1.7e-92 342.8 191 83.8
Sed0008907 Sechium edule HOM05D005644 ORTHO05D007092 1.7e-92 342.8 193 83.9
CiPaw.02G018800 Carya illinoinensis HOM05D005644 ORTHO05D007092 2.9e-92 342.0 193 82.4
MBI02_g12270_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.8e-92 341.7 209 78.5
Medtr8g077200 Medicago truncatula HOM05D005644 ORTHO05D007092 3.8e-92 341.7 191 83.2
Atru.chr7.2312 Acer truncatum HOM05D005644 ORTHO05D007092 1.9e-91 339.3 191 81.7
Solyc02g062680.3 Solanum lycopersicum HOM05D005644 ORTHO05D007092 3.2e-91 338.6 192 82.8
Sopen02g013700 Solanum pennellii HOM05D005644 ORTHO05D007092 3.2e-91 338.6 192 82.8
AL3G51550 Arabidopsis lyrata HOM05D005644 ORTHO05D007092 4.2e-91 338.2 193 81.3
AT2G18290 Arabidopsis thaliana HOM05D005644 ORTHO05D007092 4.2e-91 338.2 193 81.3
Oeu002799.2 Olea europaea HOM05D005644 ORTHO05D007092 4.2e-91 338.2 192 82.8
Eucgr.I02428 Eucalyptus grandis HOM05D005644 ORTHO05D007092 5.4e-91 337.8 193 82.4
PGSC0003DMG400015483 Solanum tuberosum HOM05D005644 ORTHO05D007092 5.4e-91 337.8 192 82.8
CANSAT01G2444 Cannabis sativa HOM05D005644 ORTHO05D007092 1.2e-90 336.7 193 82.9
Hund21503 Selenicereus undatus HOM05D005644 ORTHO05D007092 2.7e-90 335.5 193 79.8
ECA232G0363 Erigeron canadensis HOM05D005644 ORTHO05D007092 6.0e-90 334.3 193 82.4
unitig_37.g12363 Utricularia gibba HOM05D005644 ORTHO05D007092 6.0e-90 334.3 192 81.2
Aa31LG8G15730 Aethionema arabicum HOM05D005644 ORTHO05D007092 7.8e-90 334.0 193 80.8
Sp3g31700 Schrenkiella parvula HOM05D005644 ORTHO05D007092 7.8e-90 334.0 193 80.8
HanXRQChr09g0261331 Helianthus annuus HOM05D005644 ORTHO05D007092 1.0e-89 333.6 193 83.4
RcHm_v2.0_Chr2g0101251 Rosa chinensis HOM05D005644 ORTHO05D007092 1.7e-89 332.8 193 82.9
Lj4g0022669 Lotus japonicus HOM05D005644 ORTHO05D007092 3.0e-89 332.0 192 81.8
ATR0594G186 Amborella trichopoda HOM05D005644 ORTHO05D007092 3.9e-89 331.6 192 81.2
Carub.0003s3246 Capsella rubella HOM05D005644 ORTHO05D007092 3.9e-89 331.6 193 80.3
ClCG10G013900 Citrullus lanatus HOM05D005644 ORTHO05D007092 3.9e-89 331.6 219 74.9
FvH4_1g13080 Fragaria vesca HOM05D005644 ORTHO05D007092 3.9e-89 331.6 192 82.3
Glyma.02G055400 Glycine max HOM05D005644 ORTHO05D007092 3.9e-89 331.6 191 83.2
CAN.G53.17 Capsicum annuum HOM05D005644 ORTHO05D007092 5.1e-89 331.3 192 80.7
THA.LOC104819776 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 5.1e-89 331.3 193 80.3
EL10Ac4g07935 Beta vulgaris HOM05D005644 ORTHO05D007092 8.7e-89 330.5 193 79.3
A06p33310 Brassica napus HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 79.3
C03p59070 Brassica napus HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 79.3
BolC3t18168H Brassica oleracea HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 79.3
Thhalv10022866m.g Eutrema salsugineum HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 79.8
Sc16g0002690 Simmondsia chinensis HOM05D005644 ORTHO05D007092 1.9e-88 329.3 193 78.8
BcaB08g34803 Brassica carinata HOM05D005644 ORTHO05D007092 3.3e-88 328.6 193 79.3
PGR031G1764 Punica granatum HOM05D005644 ORTHO05D007092 2.1e-87 325.9 197 80.2
Lsat_1_v5_gn_4_151201 Lactuca sativa HOM05D005644 ORTHO05D007092 1.4e-86 323.2 182 85.2
TPR.G24098 Trifolium pratense HOM05D005644 ORTHO05D007092 1.4e-86 323.2 230 69.1
FvH4_5g29620 Fragaria vesca HOM05D005644 ORTHO05D007092 2.4e-86 322.4 192 80.2
Zm00001eb342630 Zea mays HOM05D005644 ORTHO05D007092 5.3e-86 321.2 201 76.1
THA.LOC104804235 Tarenaya hassleriana HOM05D005644 ORTHO05D007092 2.0e-85 319.3 193 78.2
Rhsim11G0151400 Rhododendron simsii HOM05D005644 ORTHO05D007092 3.4e-85 318.5 247 66.8
Os05g0579800 Oryza sativa ssp. japonica HOM05D005644 ORTHO05D007092 4.5e-85 318.2 201 74.6
AUR62020530 Chenopodium quinoa HOM05D005644 ORTHO05D007092 9.9e-85 317.0 193 77.7
AUR62043224 Chenopodium quinoa HOM05D005644 ORTHO05D007092 9.9e-85 317.0 193 77.7
PGR083G1765 Punica granatum HOM05D005644 ORTHO05D007092 2.4e-83 312.4 193 77.2
CSS0024834 Camellia sinensis var. sinensis HOM05D005644 ORTHO05D007092 1.0e-81 307.0 164 87.8
CDE04G3399 Ceratophyllum demersum HOM05D005644 ORTHO05D007092 1.0e-81 307.0 164 84.8
Zm00001eb294590 Zea mays HOM05D005644 ORTHO05D007092 6.7e-81 304.3 198 72.7
BraA06t26260Z Brassica rapa HOM05D005644 ORTHO05D007092 1.1e-80 303.5 199 73.9
VMungo0251G3244 Vigna mungo HOM05D005644 ORTHO05D007092 3.3e-80 302.0 168 85.1
AUR62034193 Chenopodium quinoa HOM05D005644 ORTHO05D007092 2.8e-79 298.9 193 73.6
Nitab4.5_0000136g0330 Nicotiana tabacum HOM05D005644 ORTHO05D007092 3.7e-79 298.5 174 81.0
Peaxi162Scf00008g03525 Petunia axillaris HOM05D005644 ORTHO05D007092 1.4e-78 296.6 192 75.5
Nitab4.5_0005482g0020 Nicotiana tabacum HOM05D005644 ORTHO05D007092 1.8e-78 296.2 176 81.2
Atru.chr3.600 Acer truncatum HOM05D005644 ORTHO05D007092 2.9e-76 288.9 193 70.5
FAN19G1519 Fragaria x ananassa HOM05D005644 ORTHO05D007092 3.2e-75 285.4 169 80.5
Sabra05G0100200 Salix brachista HOM05D005644 ORTHO05D007092 2.3e-73 279.3 159 81.8
BolC7t40857H Brassica oleracea HOM05D005644 ORTHO05D007092 5.3e-70 268.1 196 66.8
MBI08_g40822_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 8.4e-68 260.8 226 61.5
FAN28G2376 Fragaria x ananassa HOM05D005644 ORTHO05D003509 3.2e-67 258.8 159 79.2
FAN23G1669 Fragaria x ananassa HOM05D005644 ORTHO05D007092 4.2e-67 258.5 160 78.8
FAN08G2945 Fragaria x ananassa HOM05D005644 ORTHO05D007092 7.9e-66 254.2 158 77.2
Hma1.2p1_0789F.1_g218290 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 3.9e-65 251.9 134 87.3
HPP92_023420 Vanilla planifolia HOM05D005644 ORTHO05D007092 6.7e-65 251.1 194 66.0
Cpa.g.sc6.131 Carica papaya HOM05D005644 ORTHO05D007092 1.2e-61 240.4 138 82.6
Mapoly0106s0034 Marchantia polymorpha HOM05D005644 ORTHO05D007092 1.4e-59 233.4 170 62.4
SGA_v2.0_scaffold2G01321 Striga asiatica HOM05D005644 ORTHO05D007092 3.2e-59 232.3 192 64.1
BcaC06g36396 Brassica carinata HOM05D005644 ORTHO05D007092 1.2e-58 230.3 164 67.1
FAN26G0781 Fragaria x ananassa HOM05D000577 ORTHO05D003509 1.3e-55 220.3 135 79.3
Pp3c7_6320 Physcomitrium patens HOM05D005644 ORTHO05D007092 1.3e-55 220.3 170 59.4
SMO137G0236 Selaginella moellendorffii HOM05D005644 ORTHO05D007092 2.2e-55 219.5 170 58.8
AagrBONN_evm.TU.Sc2ySwM_362.2207 Anthoceros agrestis HOM05D005644 ORTHO05D007092 6.3e-55 218.0 173 57.2
CARHR108880 Cardamine hirsuta HOM05D005644 ORTHO05D007092 1.2e-50 203.8 112 82.1
MCO15G254 Micromonas commoda HOM05D005644 ORTHO05D007092 1.2e-50 203.8 178 53.9
FAN18G2110 Fragaria x ananassa HOM05D005644 ORTHO05D007092 1.0e-49 200.7 168 61.3
PRCOL_00001837 Prasinoderma coloniale HOM05D005644 ORTHO05D007092 1.2e-45 187.2 142 59.9
Haze_27504 Corylus avellana HOM05D005644 ORTHO05D007092 9.4e-43 177.6 142 54.9
SEGI_22782 Sequoiadendron giganteum HOM05D005644 ORTHO05D007092 1.6e-42 176.8 110 73.6
Cre13.g571850 Chlamydomonas reinhardtii HOM05D005644 ORTHO05D007092 3.5e-37 159.1 144 48.6
CBR_g49399 Chara braunii HOM05D005644 ORTHO05D007092 4.5e-37 158.7 112 63.4
MBI02_g42708_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 4.1e-30 135.6 133 57.1
FAN13G0528 Fragaria x ananassa HOM05D005644 ORTHO05D007092 5.3e-30 135.2 169 46.2
Hma1.2p1_2451F.1_g322360 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 1.0e-28 131.0 134 53.0
DCAR_025950 Daucus carota HOM05D005644 ORTHO05D007092 1.3e-28 130.6 135 52.6
MBI02_g23461_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 3.2e-27 125.9 216 40.7
MBI02_g17151_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.5e-24 114.8 133 50.4
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 7.5e-24 114.8 122 51.6
C07p04570 Brassica napus HOM05D005644 ORTHO05D007092 5.4e-22 108.6 125 45.6
MBI18_g01974_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 5.4e-22 108.6 71 70.4
Hma1.2p1_0450F.1_g155660 Hydrangea macrophylla HOM05D005644 ORTHO05D007092 7.2e-19 98.2 59 76.3
Hund21501 Selenicereus undatus HOM05D005644 ORTHO05D007092 3.0e-17 92.8 53 83.0
Ah.13g077660 Amaranthus hybridus HOM05D005644 ORTHO05D007092 1.1e-14 84.3 56 66.1
COL.COLO4_22055 Corchorus olitorius HOM05D005644 ORTHO05D007092 2.4e-14 83.2 50 80.0
Dinv38404 Davidia involucrata HOM05D005644 ORTHO05D007092 8.0e-10 68.2 42 78.6
MBI16_g04464_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 8.0e-10 68.2 103 38.8
Thecc.08G151500 Theobroma cacao HOM05D005644 ORTHO05D007092 8.3e-07 58.2 33 69.7


User provided reference genes

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