Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 1.9e-148 529.3 286 100.0
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 2.7e-46 189.9 267 49.4
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 6.7e-45 185.3 131 71.0
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 4.4e-44 182.6 276 48.6
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 9.1e-42 174.9 135 69.6
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.2e-41 174.5 141 66.7
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 1.2e-41 174.5 236 49.2
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 1.5e-41 174.1 277 48.0
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 4.5e-41 172.6 181 55.8
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 3.8e-40 169.5 251 47.4
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 5.0e-40 169.1 253 46.2
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 6.5e-40 168.7 264 44.3
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 6.5e-40 168.7 235 53.2
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 1.1e-39 167.9 152 60.5
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.1e-39 167.9 264 42.4
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 4.2e-39 166.0 218 51.8
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 4.2e-39 166.0 241 50.2
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 2.7e-38 163.3 264 44.7
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 3.6e-38 162.9 135 65.2
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 4.7e-38 162.5 141 63.1
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 7.9e-38 161.8 246 46.3
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 7.9e-38 161.8 285 44.2
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 7.9e-38 161.8 155 61.9
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 1.4e-37 161.0 233 48.9
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 1.4e-37 161.0 147 57.8
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.8e-37 160.6 260 43.8
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 2.3e-37 160.2 229 48.5
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 2.3e-37 160.2 256 48.0
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 3.0e-37 159.8 147 59.9
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 3.9e-37 159.5 112 71.4
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 5.2e-37 159.1 249 44.2
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 1.1e-36 157.9 278 41.4
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 3.3e-36 156.4 119 67.2
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.4e-36 156.0 183 52.5
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 5.7e-36 155.6 262 44.7
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 7.4e-36 155.2 240 44.2
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 7.4e-36 155.2 258 45.7
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 9.7e-36 154.8 138 61.6
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 9.7e-36 154.8 122 68.9
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 2.2e-35 153.7 274 41.6
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 2.2e-35 153.7 129 62.8
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 2.2e-35 153.7 257 45.1
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 2.2e-35 153.7 117 65.8
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 2.8e-35 153.3 254 42.9
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.8e-35 152.5 262 44.3
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 4.8e-35 152.5 283 42.4
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 6.3e-35 152.1 258 42.2
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 6.3e-35 152.1 109 69.7
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 6.3e-35 152.1 240 45.8
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 8.2e-35 151.8 257 44.7
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-34 151.4 235 46.0
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.1e-34 151.4 162 54.9
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.4e-34 151.0 249 44.2
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 1.4e-34 151.0 257 44.7
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 1.8e-34 150.6 277 41.9
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 3.1e-34 149.8 136 58.8
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 3.1e-34 149.8 256 43.0
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 3.1e-34 149.8 282 39.7
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 7.0e-34 148.7 256 42.6
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 7.0e-34 148.7 214 48.1
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.6e-33 147.5 246 45.9
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 1.6e-33 147.5 157 53.5
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 2.0e-33 147.1 272 41.9
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 2.0e-33 147.1 106 69.8
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 2.6e-33 146.7 268 41.0
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 4.5e-33 146.0 140 59.3
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 4.5e-33 146.0 255 42.7
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.0e-32 144.8 252 42.1
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.0e-32 144.8 282 39.4
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 2.9e-32 143.3 114 66.7
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 5.0e-32 142.5 103 69.9
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 6.5e-32 142.1 170 49.4
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 1.5e-31 141.0 202 47.5
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.9e-31 140.6 244 44.3
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 2.5e-31 140.2 238 42.0
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.2e-31 139.8 269 43.1
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 4.2e-31 139.4 210 48.1
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 2.7e-30 136.7 241 43.6
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 6.1e-30 135.6 313 37.4
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 2.3e-29 133.7 135 57.0
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 2.3e-29 133.7 135 57.0
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 6.7e-29 132.1 109 64.2
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.5e-28 131.0 270 40.7
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 3.3e-28 129.8 276 40.2
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.3e-27 127.9 267 40.4
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.3e-27 127.9 234 42.3
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.7e-27 127.5 236 43.2
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 3.7e-27 126.3 261 41.0
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 6.3e-27 125.6 234 43.6
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.8e-26 124.0 173 50.3
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 1.8e-26 124.0 231 41.1
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.8e-26 124.0 231 41.1
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 3.1e-26 123.2 250 41.6
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 5.3e-26 122.5 260 40.4
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.6e-25 120.9 265 40.8
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 1.0e-24 118.2 258 39.1
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 1.0e-24 118.2 229 40.2
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 1.3e-24 117.9 254 41.7
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 2.2e-24 117.1 224 41.5
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 2.2e-24 117.1 224 41.5
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 2.2e-24 117.1 245 40.0
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 5.0e-24 115.9 230 40.0
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 7.5e-20 102.1 137 46.0
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 9.1e-18 95.1 105 44.8
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.6e-17 94.4 209 40.7
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 2.9e-16 90.1 134 37.3
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.2e-15 86.3 81 56.8
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 4.2e-15 86.3 80 57.5
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 5.5e-15 85.9 204 40.2
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.8e-14 83.6 79 57.0
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 3.6e-14 83.2 110 41.8
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 8.0e-14 82.0 54 74.1
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-13 81.3 61 62.3
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.4e-13 81.3 61 62.3
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 1.4e-13 81.3 176 35.8
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.2e-13 79.3 59 62.7
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 1.5e-12 77.8 54 74.1
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 4.4e-12 76.3 57 71.9
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 1.1e-10 71.6 92 51.1
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 3.5e-09 66.6 48 70.8
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 1.1e-07 61.6 80 41.2


User provided reference genes

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