Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0615 Papaver somniferum HOM05D001603 ORTHO05D001393 7.4e-141 503.8 247 100.0
PSO384G2124 Papaver somniferum HOM05D001603 ORTHO05D001393 3.7e-108 395.2 224 86.2
Thecc.09G136900 Theobroma cacao HOM05D001603 ORTHO05D001393 5.7e-16 89.0 203 29.6
Aqoxy6G02756 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 2.1e-15 87.0 183 32.2
Atru.chr7.1960 Acer truncatum HOM05D001603 ORTHO05D001393 6.3e-15 85.5 94 44.7
Atru.chr7.1961 Acer truncatum HOM05D001603 ORTHO05D001393 2.4e-14 83.6 94 43.6
Aqoxy6G02757 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 4.1e-14 82.8 192 30.7
Atru.chr7.2004 Acer truncatum HOM05D001603 ORTHO05D001393 6.9e-14 82.0 89 46.1
Gohir.D13G021050 Gossypium hirsutum HOM05D001603 ORTHO05D001393 4.5e-13 79.3 202 29.2
Gorai.N025500 Gossypium raimondii HOM05D001603 ORTHO05D001393 4.5e-13 79.3 203 29.1
Aqoxy6G02760 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 5.9e-13 79.0 88 43.2
Atru.chr11.1514 Acer truncatum HOM05D001603 ORTHO05D001393 7.6e-13 78.6 80 48.8
Carub.0008s1421 Capsella rubella HOM05D001603 ORTHO05D001393 1.0e-12 78.2 144 37.5
Gohir.A13G020450 Gossypium hirsutum HOM05D001603 ORTHO05D001393 1.0e-12 78.2 202 28.2
TWI34G1530 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 1.0e-12 78.2 161 29.2
Peaxi162Scf01694g00006 Petunia axillaris HOM05D001603 ORTHO05D001393 8.4e-12 75.1 63 46.0
TWI63G0036 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 1.1e-11 74.7 161 28.6
Atru.chr11.1201 Acer truncatum HOM05D001603 ORTHO05D001393 4.2e-11 72.8 200 30.0
Carub.0008s1450 Capsella rubella HOM05D001603 ORTHO05D001393 4.2e-11 72.8 74 44.6
PGSC0003DMG400004472 Solanum tuberosum HOM05D001603 ORTHO05D001393 1.2e-10 71.2 102 39.2
Duzib187G1932 Durio zibethinus HOM05D001603 ORTHO05D001393 2.7e-10 70.1 69 43.5
COL.COLO4_33371 Corchorus olitorius HOM05D001603 ORTHO05D001393 1.0e-09 68.2 88 37.5
CSS0032619 Camellia sinensis var. sinensis HOM05D001603 ORTHO05D001393 1.8e-09 67.4 63 42.9
Carub.0008s1435 Capsella rubella HOM05D001603 ORTHO05D001393 1.8e-09 67.4 74 41.9
C04p54650 Brassica napus HOM05D001603 ORTHO05D001393 2.3e-09 67.0 171 28.1
Nn2g12175 Nelumbo nucifera HOM05D001603 ORTHO05D001393 3.9e-09 66.2 79 44.3
AT5G54062 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 5.1e-09 65.9 99 34.3
CiPaw.03G252200 Carya illinoinensis HOM05D001603 ORTHO05D001393 5.1e-09 65.9 86 37.2
RcHm_v2.0_Chr2g0087141 Rosa chinensis HOM05D001603 ORTHO05D001393 5.1e-09 65.9 98 39.8
TWI34G1934 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 5.1e-09 65.9 60 41.7
Carub.0008s1404 Capsella rubella HOM05D001603 ORTHO05D001393 6.7e-09 65.5 69 40.6
RcHm_v2.0_Chr1g0323971 Rosa chinensis HOM05D001603 ORTHO05D001393 6.7e-09 65.5 68 41.2
Thecc.09G137000 Theobroma cacao HOM05D001603 ORTHO05D001393 6.7e-09 65.5 83 38.6
Lj7C438T17 Lonicera japonica HOM05D001603 ORTHO05D001393 8.7e-09 65.1 72 40.3
Aqoxy1G00790 Aquilegia oxysepala HOM05D001603 ORTHO05D001393 1.1e-08 64.7 97 33.0
BcaB01g04253 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-08 64.7 69 40.6
BcaC02g08400 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-08 64.7 171 28.1
BcaC02g08405 Brassica carinata HOM05D001603 ORTHO05D001393 1.1e-08 64.7 171 28.1
BolC4t27013H Brassica oleracea HOM05D001603 ORTHO05D001393 1.1e-08 64.7 171 28.1
Dinv11829 Davidia involucrata HOM05D001603 ORTHO05D001393 1.1e-08 64.7 137 29.9
Dinv11830 Davidia involucrata HOM05D001603 ORTHO05D001393 1.1e-08 64.7 137 29.9
Peaxi162Scf00088g00821 Petunia axillaris HOM05D001603 ORTHO05D001393 1.1e-08 64.7 200 26.5
C04p54600 Brassica napus HOM05D001603 ORTHO05D001393 1.5e-08 64.3 171 28.1
Gorai.004G109100 Gossypium raimondii HOM05D001603 ORTHO05D001393 1.5e-08 64.3 90 34.4
BcaC02g08401 Brassica carinata HOM05D001603 ORTHO05D001393 1.9e-08 63.9 171 28.1
BolC4t27011H Brassica oleracea HOM05D001603 ORTHO05D001393 1.9e-08 63.9 171 28.1
CARHR154350 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.9e-08 63.9 65 40.0
Peaxi162Scf01147g00112 Petunia axillaris HOM05D001603 ORTHO05D001393 1.9e-08 63.9 59 42.4
BraA02t06211Z Brassica rapa HOM05D001603 ORTHO05D001393 2.5e-08 63.5 231 24.7
Lj7A438G59 Lonicera japonica HOM05D001603 ORTHO05D001393 2.5e-08 63.5 88 34.1
C04p54690 Brassica napus HOM05D001603 ORTHO05D001393 3.3e-08 63.2 171 27.5
DCAR_020898 Daucus carota HOM05D012509 ORTHO05D009596 3.3e-08 63.2 86 38.4
Rhsim01G0055200 Rhododendron simsii HOM05D001603 ORTHO05D001393 3.3e-08 63.2 69 42.0
AT5G53742 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 4.3e-08 62.8 73 43.8
A03p15020 Brassica napus HOM05D001603 ORTHO05D001393 4.3e-08 62.8 69 36.2
C03p17510 Brassica napus HOM05D001603 ORTHO05D001393 4.3e-08 62.8 69 36.2
BolC3t14164H Brassica oleracea HOM05D001603 ORTHO05D001393 4.3e-08 62.8 69 36.2
BraA03t10796Z Brassica rapa HOM05D001603 ORTHO05D001393 4.3e-08 62.8 69 36.2
Gorai.013G023700 Gossypium raimondii HOM05D001603 ORTHO05D001393 4.3e-08 62.8 99 35.4
PSO782G1967 Papaver somniferum HOM05D001603 ORTHO05D001393 4.3e-08 62.8 82 40.2
CARHR267050 Cardamine hirsuta HOM05D001603 ORTHO05D001393 7.4e-08 62.0 67 38.8
Thhalv10005158m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 7.4e-08 62.0 72 43.1
Rhsim03G0252800 Rhododendron simsii HOM05D001603 ORTHO05D001393 7.4e-08 62.0 74 39.2
Sopen05g005970 Solanum pennellii HOM05D001603 ORTHO05D001393 7.4e-08 62.0 73 35.6
AL8G27510 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 9.7e-08 61.6 69 37.7
DCAR_021856 Daucus carota HOM05D012509 ORTHO05D009596 1.3e-07 61.2 79 35.4
FAN06G4924 Fragaria x ananassa HOM05D001603 ORTHO05D001393 1.3e-07 61.2 86 31.4
Gohir.D08G101100 Gossypium hirsutum HOM05D001603 ORTHO05D001393 1.3e-07 61.2 90 34.4
Lsat_1_v5_gn_5_93241 Lactuca sativa HOM05D001603 ORTHO05D001393 1.3e-07 61.2 98 34.7
PSO478G0125 Papaver somniferum HOM05D001603 ORTHO05D001393 1.3e-07 61.2 85 37.6
Thecc.09G136800 Theobroma cacao HOM05D001603 ORTHO05D001393 1.3e-07 61.2 69 39.1
AL8G27490 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 1.6e-07 60.8 68 39.7
BcaC01g06264 Brassica carinata HOM05D001603 ORTHO05D001393 1.6e-07 60.8 60 40.0
Carub.0008s1317 Capsella rubella HOM05D001603 ORTHO05D001393 1.6e-07 60.8 69 40.6
Thhalv10029475m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 1.6e-07 60.8 69 39.1
RcHm_v2.0_Chr2g0131141 Rosa chinensis HOM05D001603 ORTHO05D001393 1.6e-07 60.8 60 41.7
C04p54670 Brassica napus HOM05D001603 ORTHO05D001393 2.2e-07 60.5 60 46.7
Carub.0008s2422 Capsella rubella HOM05D001603 ORTHO05D001393 2.2e-07 60.5 74 40.5
RcHm_v2.0_Chr2g0131241 Rosa chinensis HOM05D001603 ORTHO05D001393 2.2e-07 60.5 60 41.7
TWI34G1802 Tripterygium wilfordii HOM05D001603 ORTHO05D001393 2.2e-07 60.5 68 36.8
vmacro07747 Vaccinium macrocarpon HOM05D001603 ORTHO05D001393 2.2e-07 60.5 93 35.5
RcHm_v2.0_Chr2g0087131 Rosa chinensis HOM05D001603 ORTHO05D001393 2.8e-07 60.1 60 40.0
vmacro07748 Vaccinium macrocarpon HOM05D001603 ORTHO05D001393 2.8e-07 60.1 62 37.1
BcaB05g21995 Brassica carinata HOM05D001603 ORTHO05D001393 3.7e-07 59.7 69 36.2
CARHR243480 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.7e-07 59.7 71 38.0
ECA234G4287 Erigeron canadensis HOM05D001603 ORTHO05D001393 3.7e-07 59.7 85 36.5
RcHm_v2.0_Chr2g0131221 Rosa chinensis HOM05D001603 ORTHO05D001393 3.7e-07 59.7 60 41.7
THA.LOC104811131 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 3.7e-07 59.7 68 42.6
THA.LOC104811299 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 3.7e-07 59.7 68 42.6
Thhalv10016069m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 4.8e-07 59.3 60 40.0
Gorai.013G023600 Gossypium raimondii HOM05D001603 ORTHO05D001393 4.8e-07 59.3 71 42.3
THA.LOC104809637 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 4.8e-07 59.3 68 42.6
BcaC02g08403 Brassica carinata HOM05D001603 ORTHO05D001393 6.3e-07 58.9 60 43.3
BcaC02g08407 Brassica carinata HOM05D001603 ORTHO05D001393 6.3e-07 58.9 60 43.3
BolC4t27003H Brassica oleracea HOM05D001603 ORTHO05D001393 6.3e-07 58.9 60 43.3
BolC4t27006H Brassica oleracea HOM05D001603 ORTHO05D001393 6.3e-07 58.9 60 43.3
COL.COLO4_24892 Corchorus olitorius HOM05D001603 ORTHO05D001393 6.3e-07 58.9 78 33.3
Aa31LG5G23090 Aethionema arabicum HOM05D001603 ORTHO05D001393 8.2e-07 58.5 60 40.0
AL5G28100 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 8.2e-07 58.5 66 37.9
BcaB05g21994 Brassica carinata HOM05D001603 ORTHO05D001393 8.2e-07 58.5 69 34.8
C02p19000 Brassica napus HOM05D001603 ORTHO05D001393 8.2e-07 58.5 69 34.8
Cpa.g.sc46.132 Carica papaya HOM05D043110 ORTHO05D001393 8.2e-07 58.5 73 35.6
MD02G1018800 Malus domestica HOM05D001603 ORTHO05D001393 8.2e-07 58.5 74 35.1
AL8G40580 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 1.1e-06 58.2 119 30.3
C02p18920 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-06 58.2 69 36.2
C02p19070 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-06 58.2 69 34.8
C02p19090 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-06 58.2 69 34.8
C02p19110 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-06 58.2 69 34.8
C02p19140 Brassica napus HOM05D001603 ORTHO05D001393 1.1e-06 58.2 69 34.8
BolC2t08039H Brassica oleracea HOM05D001603 ORTHO05D001393 1.1e-06 58.2 69 34.8
BolC2t08041H Brassica oleracea HOM05D001603 ORTHO05D001393 1.1e-06 58.2 69 34.8
BolC2t08043H Brassica oleracea HOM05D001603 ORTHO05D001393 1.1e-06 58.2 69 34.8
Thhalv10005546m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 1.1e-06 58.2 69 37.7
AL8G27470 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 1.4e-06 57.8 68 36.8
AT4G35165 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.4e-06 57.8 72 36.1
BolC2t08033H Brassica oleracea HOM05D001603 ORTHO05D001393 1.4e-06 57.8 69 36.2
PSO782G2776 Papaver somniferum HOM05D001603 ORTHO05D001393 1.4e-06 57.8 75 37.3
SGA_v2.0_scaffold24G10427 Striga asiatica HOM05D001603 ORTHO05D001393 1.4e-06 57.8 65 36.9
THA.LOC104811298 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 1.4e-06 57.8 68 41.2
AL7G16040 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 1.8e-06 57.4 71 38.0
AT3G48675 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.8e-06 57.4 67 37.3
AT5G52965 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.8e-06 57.4 68 36.8
AT5G52975 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.8e-06 57.4 68 36.8
AT5G53905 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 1.8e-06 57.4 69 36.2
C02p18990 Brassica napus HOM05D001603 ORTHO05D001393 1.8e-06 57.4 69 34.8
Carub.0007s0514 Capsella rubella HOM05D001603 ORTHO05D001393 1.8e-06 57.4 71 39.4
Carub.0008s0802 Capsella rubella HOM05D001603 ORTHO05D001393 1.8e-06 57.4 68 38.2
CAN.G184.54 Capsicum annuum HOM05D001603 ORTHO05D001393 1.8e-06 57.4 74 33.8
CARHR265940 Cardamine hirsuta HOM05D001603 ORTHO05D001393 1.8e-06 57.4 97 34.0
Dinv11833 Davidia involucrata HOM05D001603 ORTHO05D001393 1.8e-06 57.4 69 39.1
Migut.K00395 Erythranthe guttata HOM05D001603 ORTHO05D001393 1.8e-06 57.4 67 40.3
Thhalv10005396m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 1.8e-06 57.4 69 37.7
Carub.0004s0795 Capsella rubella HOM05D001603 ORTHO05D001393 2.4e-06 57.0 68 35.3
CARHR267040 Cardamine hirsuta HOM05D001603 ORTHO05D001393 2.4e-06 57.0 60 38.3
Gorai.004G109000 Gossypium raimondii HOM05D001603 ORTHO05D001393 2.4e-06 57.0 75 34.7
AT2G27315 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 3.1e-06 56.6 73 35.6
BcaC03g14473 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BcaC03g14476 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BcaC03g14477 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BcaC03g14480 Brassica carinata HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
A02p11400 Brassica napus HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
A02p11420 Brassica napus HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
A02p11430 Brassica napus HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
A02p42790 Brassica napus HOM05D001603 ORTHO05D001393 3.1e-06 56.6 64 39.1
C02p18930 Brassica napus HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
C02p18950 Brassica napus HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BolC2t08037H Brassica oleracea HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BraA02t06205Z Brassica rapa HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BraA02t06207Z Brassica rapa HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BraA02t06208Z Brassica rapa HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BraA02t06210Z Brassica rapa HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BraA02t06212Z Brassica rapa HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 34.8
BraA02t09205Z Brassica rapa HOM05D001603 ORTHO05D001393 3.1e-06 56.6 64 39.1
Carub.0008s1315 Capsella rubella HOM05D001603 ORTHO05D001393 3.1e-06 56.6 69 37.7
CARHR042990 Cardamine hirsuta HOM05D001603 ORTHO05D001393 3.1e-06 56.6 63 41.3
FAN19G2115 Fragaria x ananassa HOM05D001603 ORTHO05D001393 3.1e-06 56.6 83 37.3
Sp6g15130 Schrenkiella parvula HOM05D001603 ORTHO05D001393 3.1e-06 56.6 68 36.8
BcaC03g14478 Brassica carinata HOM05D001603 ORTHO05D001393 4.1e-06 56.2 69 34.8
A02p11460 Brassica napus HOM05D001603 ORTHO05D001393 4.1e-06 56.2 69 34.8
CARHR265960 Cardamine hirsuta HOM05D001603 ORTHO05D001393 4.1e-06 56.2 68 38.2
CARHR277370 Cardamine hirsuta HOM05D001603 ORTHO05D001393 4.1e-06 56.2 89 37.1
PSO478G1756 Papaver somniferum HOM05D001603 ORTHO05D001393 4.1e-06 56.2 73 38.4
AL4G21270 Arabidopsis lyrata HOM05D001603 ORTHO05D001393 5.3e-06 55.8 68 35.3
AT2G14378 Arabidopsis thaliana HOM05D001603 ORTHO05D001393 5.3e-06 55.8 72 34.7
BcaC06g33682 Brassica carinata HOM05D001603 ORTHO05D001393 5.3e-06 55.8 71 39.4
A02p11440 Brassica napus HOM05D001603 ORTHO05D001393 5.3e-06 55.8 69 34.8
A02p11450 Brassica napus HOM05D001603 ORTHO05D001393 5.3e-06 55.8 69 33.3
A06p40030 Brassica napus HOM05D001603 ORTHO05D001393 5.3e-06 55.8 71 39.4
C07p38140 Brassica napus HOM05D001603 ORTHO05D001393 5.3e-06 55.8 71 39.4
BolC7t44336H Brassica oleracea HOM05D001603 ORTHO05D001393 5.3e-06 55.8 71 39.4
BraA02t06204Z Brassica rapa HOM05D001603 ORTHO05D001393 5.3e-06 55.8 69 33.3
BraA06t26918Z Brassica rapa HOM05D001603 ORTHO05D001393 5.3e-06 55.8 71 39.4
CARHR119910 Cardamine hirsuta HOM05D001603 ORTHO05D001393 5.3e-06 55.8 68 36.8
FvH4_1g02090 Fragaria vesca HOM05D001603 ORTHO05D001393 5.3e-06 55.8 60 40.0
Lsat_1_v5_gn_5_92780 Lactuca sativa HOM05D001603 ORTHO05D001393 5.3e-06 55.8 78 35.9
Rhsim01G0055000 Rhododendron simsii HOM05D001603 ORTHO05D001393 5.3e-06 55.8 70 35.7
THA.LOC104811297 Tarenaya hassleriana HOM05D001603 ORTHO05D001393 5.3e-06 55.8 65 40.0
BcaC03g14475 Brassica carinata HOM05D001603 ORTHO05D001393 6.9e-06 55.5 69 34.8
BolC2t08034H Brassica oleracea HOM05D001603 ORTHO05D001393 6.9e-06 55.5 69 33.3
ECA236G2357 Erigeron canadensis HOM05D001603 ORTHO05D001393 6.9e-06 55.5 52 48.1
BcaB07g29691 Brassica carinata HOM05D001603 ORTHO05D001393 9.0e-06 55.1 79 34.2
C02p18980 Brassica napus HOM05D001603 ORTHO05D001393 9.0e-06 55.1 69 33.3
CARHR157430 Cardamine hirsuta HOM05D001603 ORTHO05D001393 9.0e-06 55.1 67 35.8
Thhalv10005657m.g Eutrema salsugineum HOM05D001603 ORTHO05D001393 9.0e-06 55.1 68 36.8
Sp6g09890 Schrenkiella parvula HOM05D001603 ORTHO05D001393 9.0e-06 55.1 69 34.8


User provided reference genes

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