Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0443 Papaver somniferum HOM05D006340 ORTHO05D007568 6.7e-159 563.9 275 100.0
PSO761G0363 Papaver somniferum HOM05D006340 ORTHO05D007568 5.7e-110 401.4 252 82.1
PSO210G6591 Papaver somniferum HOM05D006340 ORTHO05D007568 4.0e-103 378.6 230 83.9
TAR362G0132 Trochodendron aralioides HOM05D006340 ORTHO05D007568 6.6e-58 228.4 272 52.2
Aqoxy2G02721 Aquilegia oxysepala HOM05D006340 ORTHO05D007568 5.5e-52 208.8 275 44.0
QL03p014074 Quercus lobata HOM05D006340 ORTHO05D007568 1.5e-49 200.7 277 45.5
MBI18_g32031_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 9.6e-49 198.0 263 49.4
CSS0010691 Camellia sinensis var. sinensis HOM05D006340 ORTHO05D007568 3.7e-48 196.1 266 45.1
Nn3g21728 Nelumbo nucifera HOM05D006340 ORTHO05D007568 1.8e-47 193.7 260 48.5
Actinidia35518 Actinidia chinensis HOM05D006340 ORTHO05D007568 2.4e-47 193.4 276 43.1
Ciclev10000538m.g Citrus clementina HOM05D006340 ORTHO05D007568 9.0e-47 191.4 277 44.8
Atru.chr2.357 Acer truncatum HOM05D006340 ORTHO05D007568 1.5e-46 190.7 276 42.0
Cfa006707 Carpinus fangiana HOM05D006340 ORTHO05D007568 4.5e-46 189.1 255 47.5
TAR633G1326 Trochodendron aralioides HOM05D006340 ORTHO05D007568 2.5e-44 183.3 261 45.6
Haze_04056 Corylus avellana HOM05D006340 ORTHO05D007568 9.3e-44 181.4 278 43.9
Dinv24462 Davidia involucrata HOM05D006340 ORTHO05D007568 3.9e-42 176.0 267 43.8
TWI36G0703 Tripterygium wilfordii HOM05D006340 ORTHO05D007568 8.7e-42 174.9 256 45.7
Actinidia16863 Actinidia chinensis HOM05D006340 ORTHO05D007568 1.9e-41 173.7 304 39.5
Prupe.6G312400 Prunus persica HOM05D006340 ORTHO05D007568 3.3e-41 172.9 278 40.3
CiPaw.07G030100 Carya illinoinensis HOM05D006340 ORTHO05D007568 5.7e-41 172.2 275 41.5
Potri.005G013000 Populus trichocarpa HOM05D006340 ORTHO05D007568 5.7e-41 172.2 269 41.3
Duzib177G0712 Durio zibethinus HOM05D006340 ORTHO05D007568 1.1e-39 167.9 268 43.3
ClCG02G014860 Citrullus lanatus HOM05D006340 ORTHO05D007568 5.3e-39 165.6 265 40.8
Potri.013G008200 Populus trichocarpa HOM05D006340 ORTHO05D007568 9.0e-39 164.9 257 42.8
CsaV3_2G007150 Cucumis sativus L. HOM05D006340 ORTHO05D007568 3.4e-38 162.9 268 39.9
MBI19_g03242_MAGBIO Magnolia biondii HOM05D006340 ORTHO05D007568 5.0e-37 159.1 274 40.5
Thecc.05G323700 Theobroma cacao HOM05D006340 ORTHO05D007568 3.2e-36 156.4 266 41.4
Dinv30898 Davidia involucrata HOM05D006340 ORTHO05D007568 5.5e-36 155.6 276 39.1
Gohir.D11G284300 Gossypium hirsutum HOM05D006340 ORTHO05D007568 1.6e-35 154.1 265 41.5
Lju926C5T2 Lonicera japonica HOM05D006340 ORTHO05D007568 2.1e-35 153.7 270 38.1
Sed0011043 Sechium edule HOM05D006340 ORTHO05D007568 2.1e-35 153.7 273 38.5
Sed0017369 Sechium edule HOM05D006340 ORTHO05D007568 4.6e-35 152.5 260 39.2
Sabra05G0021400 Salix brachista HOM05D006340 ORTHO05D007568 6.1e-35 152.1 265 38.9
Zm00001eb340330 Zea mays HOM05D006340 ORTHO05D007568 3.0e-34 149.8 254 39.8
Sabra13G0006900 Salix brachista HOM05D006340 ORTHO05D007568 3.9e-34 149.4 258 41.5
Lj5C328T5 Lonicera japonica HOM05D006340 ORTHO05D007568 8.7e-34 148.3 247 42.5
MELO3C004178.2 Cucumis melo HOM05D006340 ORTHO05D007568 2.5e-33 146.7 267 39.0
Gorai.007G307200 Gossypium raimondii HOM05D006340 ORTHO05D007568 2.5e-33 146.7 266 39.8
Cpa.g.sc48.167 Carica papaya HOM05D006340 ORTHO05D007568 3.3e-33 146.4 279 36.9
Glyma.10G146700 Glycine max HOM05D006340 ORTHO05D007568 3.3e-33 146.4 246 39.8
MD00G1208300 Malus domestica HOM05D006340 ORTHO05D007568 3.3e-33 146.4 250 38.8
Lsat_1_v5_gn_5_40480 Lactuca sativa HOM05D006340 ORTHO05D007568 4.3e-33 146.0 275 40.0
Duzib128G1170 Durio zibethinus HOM05D006340 ORTHO05D007568 9.7e-33 144.8 266 38.7
Hma1.2p1_0008F-1.1_g005560 Hydrangea macrophylla HOM05D006340 ORTHO05D007568 9.7e-33 144.8 259 42.5
Glyma.20G096700 Glycine max HOM05D006340 ORTHO05D007568 3.7e-32 142.9 246 39.4
Zm00001eb130130 Zea mays HOM05D006340 ORTHO05D007568 3.7e-32 142.9 250 40.8
arahy.Tifrunner.gnm1.ann1.31L8TN Arachis hypogaea HOM05D006340 ORTHO05D007568 2.4e-31 140.2 265 38.9
arahy.Tifrunner.gnm1.ann1.35WTTC Arachis hypogaea HOM05D006340 ORTHO05D007568 3.1e-31 139.8 274 38.7
ECA246G2180 Erigeron canadensis HOM05D006340 ORTHO05D007568 3.1e-31 139.8 276 39.1
ATR0693G206 Amborella trichopoda HOM05D006340 ORTHO05D007568 4.1e-31 139.4 267 39.3
VMungo0720G2454 Vigna mungo HOM05D006340 ORTHO05D007568 4.1e-31 139.4 245 38.8
Medtr1g084120 Medicago truncatula HOM05D006340 ORTHO05D007568 6.9e-31 138.7 267 37.8
Cc02_g35160 Coffea canephora HOM05D006340 ORTHO05D007568 9.0e-31 138.3 267 40.4
Manes.09G177400 Manihot esculenta HOM05D006340 ORTHO05D007568 9.0e-31 138.3 272 36.8
Phvul.007G201700 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 9.0e-31 138.3 260 37.7
GSVIVG01031248001 Vitis vinifera HOM05D006340 ORTHO05D007568 9.0e-31 138.3 257 40.5
COL.COLO4_05545 Corchorus olitorius HOM05D006340 ORTHO05D007568 3.4e-30 136.3 298 36.2
Ca_10176_v3 Cicer arietinum L. HOM05D006340 ORTHO05D007568 7.7e-30 135.2 276 36.2
Phvul.001G224800 Phaseolus vulgaris HOM05D006340 ORTHO05D007568 1.0e-29 134.8 272 36.4
AUR62000387 Chenopodium quinoa HOM05D006340 ORTHO05D007568 1.7e-29 134.0 239 37.2
AUR62006742 Chenopodium quinoa HOM05D006340 ORTHO05D007568 2.2e-29 133.7 239 37.2
DCAR_025287 Daucus carota HOM05D006340 ORTHO05D007568 2.9e-29 133.3 258 37.6
HanXRQChr11g0324231 Helianthus annuus HOM05D006340 ORTHO05D007568 3.8e-29 132.9 288 37.2
CiPaw.08G154900 Carya illinoinensis HOM05D006340 ORTHO05D007568 5.0e-29 132.5 273 36.6
RcHm_v2.0_Chr3g0457201 Rosa chinensis HOM05D006340 ORTHO05D007568 8.5e-29 131.7 263 36.9
Psat6g152600 Pisum sativum HOM05D006340 ORTHO05D007568 1.9e-28 130.6 268 37.7
TPR.G2586 Trifolium pratense HOM05D006340 ORTHO05D007568 2.7e-27 126.7 284 34.9
Os01g0300900 Oryza sativa ssp. japonica HOM05D006340 ORTHO05D007568 3.6e-27 126.3 245 36.7
Gorai.004G236300 Gossypium raimondii HOM05D006340 ORTHO05D007568 1.8e-26 124.0 274 33.6
MD12G1205300 Malus domestica HOM05D006340 ORTHO05D007568 1.1e-25 121.3 256 35.5
VMungo1383G0056 Vigna mungo HOM05D006340 ORTHO05D007568 4.3e-25 119.4 253 35.2
Lalb_Chr02g0147781 Lupinus albus HOM05D006340 ORTHO05D007568 7.4e-25 118.6 253 33.2
Glyma.19G228200 Glycine max HOM05D006340 ORTHO05D007568 2.8e-24 116.7 251 36.3
FAN09G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 6.3e-24 115.5 278 33.5
vmacro01568 Vaccinium macrocarpon HOM05D006340 ORTHO05D007568 1.1e-23 114.8 277 32.9
Gohir.A08G205400 Gossypium hirsutum HOM05D006340 ORTHO05D007568 1.4e-23 114.4 267 31.5
Glyma.03G231000 Glycine max HOM05D006340 ORTHO05D007568 1.8e-23 114.0 253 36.0
PGR031G1700 Punica granatum HOM05D006340 ORTHO05D007568 2.4e-23 113.6 233 38.2
Sabra05G0020900 Salix brachista HOM05D006340 ORTHO05D007568 4.1e-23 112.8 201 38.8
FvH4_6g07501 Fragaria vesca HOM05D006340 ORTHO05D007568 6.9e-23 112.1 278 33.1
FAN14G3207 Fragaria x ananassa HOM05D006340 ORTHO05D007568 6.9e-23 112.1 278 33.1
FAN02G1774 Fragaria x ananassa HOM05D006340 ORTHO05D007568 5.9e-22 109.0 268 33.2
Gohir.D08G222500 Gossypium hirsutum HOM05D006340 ORTHO05D007568 5.9e-22 109.0 274 32.5
MSTRG.27938 Avicennia marina HOM05D006340 ORTHO05D007568 6.5e-21 105.5 204 40.7
Lj5g0007706 Lotus japonicus HOM05D006340 ORTHO05D007568 1.1e-20 104.8 257 31.9
SalBow3G0642 Salvia bowleyana HOM05D006340 ORTHO05D007568 1.1e-20 104.8 216 39.4
Rhsim11G0096500 Rhododendron simsii HOM05D006340 ORTHO05D007568 1.4e-20 104.4 260 34.2
Eucgr.H03294 Eucalyptus grandis HOM05D006340 ORTHO05D007568 1.9e-20 104.0 259 31.3
Oeu052936.1 Olea europaea HOM05D006340 ORTHO05D007568 7.2e-20 102.1 285 30.5
Sopen01g044100 Solanum pennellii HOM05D006340 ORTHO05D007568 1.6e-19 100.9 265 34.7
Solyc01g100600.4 Solanum lycopersicum HOM05D006340 ORTHO05D007568 4.7e-19 99.4 265 34.0
PGSC0003DMG400002763 Solanum tuberosum HOM05D006340 ORTHO05D007568 7.9e-19 98.6 265 34.7
Nitab4.5_0004525g0020 Nicotiana tabacum HOM05D006340 ORTHO05D007568 1.0e-18 98.2 267 33.7
CAN.G1076.21 Capsicum annuum HOM05D006340 ORTHO05D007568 1.4e-18 97.8 253 35.2
Migut.N00937 Erythranthe guttata HOM05D006340 ORTHO05D007568 2.3e-18 97.1 249 34.1
Hund07311 Selenicereus undatus HOM05D006340 ORTHO05D007568 3.0e-18 96.7 269 31.6
CDE08G0055 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 3.9e-18 96.3 264 33.3
CANSAT54G2981 Cannabis sativa HOM05D006340 ORTHO05D007568 5.1e-18 95.9 257 33.1
DCAR_029344 Daucus carota HOM05D006340 ORTHO05D007568 5.1e-18 95.9 236 35.6
HPP92_005420 Vanilla planifolia HOM05D006340 ORTHO05D007568 2.6e-17 93.6 263 31.2
SGA_v2.0_scaffold5G02892 Striga asiatica HOM05D006340 ORTHO05D007568 7.4e-17 92.0 238 30.3
arahy.Tifrunner.gnm1.ann1.9H9EE5 Arachis hypogaea HOM05D006340 ORTHO05D007568 6.3e-16 89.0 160 39.4
Oeu053742.1 Olea europaea HOM05D006340 ORTHO05D007568 6.3e-16 89.0 248 34.7
Ah.06g195990 Amaranthus hybridus HOM05D006340 ORTHO05D007568 8.2e-16 88.6 245 31.4
arahy.Tifrunner.gnm1.ann1.Y7QP4L Arachis hypogaea HOM05D006340 ORTHO05D007568 8.2e-16 88.6 160 40.0
Nitab4.5_0001338g0100 Nicotiana tabacum HOM05D006340 ORTHO05D007568 8.2e-16 88.6 245 34.3
EL10Ac4g09463 Beta vulgaris HOM05D006340 ORTHO05D007568 1.4e-15 87.8 241 29.9
THA.LOC104816894 Tarenaya hassleriana HOM05D006340 ORTHO05D007568 1.4e-15 87.8 277 30.3
Sc16g0009070 Simmondsia chinensis HOM05D006340 ORTHO05D007568 1.2e-14 84.7 274 26.6
Peaxi162Scf01061g00014 Petunia axillaris HOM05D006340 ORTHO05D007568 2.6e-14 83.6 256 32.8
FAN05G4753 Fragaria x ananassa HOM05D006340 ORTHO05D007568 3.5e-14 83.2 246 28.9
Sabra05G0022400 Salix brachista HOM05D006340 ORTHO05D007568 6.5e-13 79.0 106 45.3
Gohir.A11G274100 Gossypium hirsutum HOM05D006340 ORTHO05D007568 1.1e-12 78.2 214 34.6
CDE02G0367 Ceratophyllum demersum HOM05D006340 ORTHO05D007568 1.3e-08 64.7 201 30.3
SMO115G0101 Selaginella moellendorffii HOM05D006340 ORTHO05D007568 1.1e-07 61.6 54 53.7
Sabra05G0020800 Salix brachista HOM05D006340 ORTHO05D007568 2.7e-06 57.0 37 64.9


User provided reference genes

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