Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0435 Papaver somniferum HOM05D004981 ORTHO05D005635 1.6e-179 632.9 386 100.0
PSO781G0052 Papaver somniferum HOM05D004981 ORTHO05D005635 8.5e-168 594.0 387 91.2
MBI02_g08724_MAGBIO Magnolia biondii HOM05D004981 ORTHO05D005635 1.4e-74 284.3 395 51.6
GSVIVG01029180001 Vitis vinifera HOM05D004981 ORTHO05D005635 7.9e-73 278.5 411 48.7
Nn5g30124 Nelumbo nucifera HOM05D004981 ORTHO05D005635 3.0e-72 276.6 422 49.1
CSS0034779 Camellia sinensis var. sinensis HOM05D004981 ORTHO05D005635 3.3e-71 273.1 401 48.9
CANSAT11G0061 Cannabis sativa HOM05D004981 ORTHO05D005635 7.4e-71 271.9 392 51.3
Sed0011642 Sechium edule HOM05D004981 ORTHO05D005635 2.8e-70 270.0 414 48.1
Cc02_g21590 Coffea canephora HOM05D004981 ORTHO05D005635 1.5e-68 264.2 403 47.9
CDE10G0645 Ceratophyllum demersum HOM05D004981 ORTHO05D005635 9.9e-68 261.5 406 45.3
Dinv24195 Davidia involucrata HOM05D004981 ORTHO05D005635 9.9e-68 261.5 418 48.3
MELO3C018646.2 Cucumis melo HOM05D004981 ORTHO05D005635 1.7e-67 260.8 413 48.4
CsaV3_7G006460 Cucumis sativus L. HOM05D004981 ORTHO05D005635 3.8e-67 259.6 413 47.7
Actinidia28057 Actinidia chinensis HOM05D004981 ORTHO05D007483 1.1e-66 258.1 400 47.5
TWI59G1067 Tripterygium wilfordii HOM05D004981 ORTHO05D005635 1.1e-66 258.1 399 47.9
TAR114G0002 Trochodendron aralioides HOM05D004981 ORTHO05D005635 3.2e-66 256.5 331 50.2
Medtr2g008810 Medicago truncatula HOM05D004981 ORTHO05D005635 5.5e-66 255.8 389 48.6
MD05G1045100 Malus domestica HOM05D004981 ORTHO05D005635 4.6e-65 252.7 421 46.8
Lj6g0025255 Lotus japonicus HOM05D004981 ORTHO05D005635 7.9e-65 251.9 429 45.5
Manes.06G012400 Manihot esculenta HOM05D004981 ORTHO05D005635 7.9e-65 251.9 419 45.8
PGR142G3166 Punica granatum HOM05D004981 ORTHO05D005635 1.8e-64 250.8 413 46.0
Duzib132G0770 Durio zibethinus HOM05D004981 ORTHO05D005635 2.3e-64 250.4 407 45.7
Rhsim05G0107500 Rhododendron simsii HOM05D004981 ORTHO05D005635 8.7e-64 248.4 440 42.5
Rhsim05G0107600 Rhododendron simsii HOM05D004981 ORTHO05D005635 1.1e-63 248.1 368 45.4
Thecc.02G139100 Theobroma cacao HOM05D004981 ORTHO05D005635 3.3e-63 246.5 413 46.0
Gohir.A03G173700 Gossypium hirsutum HOM05D004981 ORTHO05D005635 4.3e-63 246.1 404 44.1
Gohir.A13G067000 Gossypium hirsutum HOM05D004981 ORTHO05D005635 5.6e-63 245.7 406 46.3
Gohir.D13G054600 Gossypium hirsutum HOM05D004981 ORTHO05D005635 7.4e-63 245.4 406 45.8
Cfa005605 Carpinus fangiana HOM05D004981 ORTHO05D005635 1.3e-62 244.6 388 42.5
Ca_00133_v3 Cicer arietinum L. HOM05D004981 ORTHO05D005635 1.3e-62 244.6 404 47.5
Migut.B00612 Erythranthe guttata HOM05D004981 ORTHO05D005635 1.3e-62 244.6 381 48.8
Gorai.013G061400 Gossypium raimondii HOM05D004981 ORTHO05D005635 3.7e-62 243.0 406 45.8
Aqoxy6G00803 Aquilegia oxysepala HOM05D004981 ORTHO05D005635 4.8e-62 242.7 386 47.9
CiPaw.06G153000 Carya illinoinensis HOM05D004981 ORTHO05D005635 6.2e-62 242.3 351 44.4
ClCG09G015370 Citrullus lanatus HOM05D004981 ORTHO05D005635 1.4e-61 241.1 419 46.1
Gorai.005G219800 Gossypium raimondii HOM05D004981 ORTHO05D005635 1.8e-61 240.7 406 45.6
QL11p020696 Quercus lobata HOM05D004981 ORTHO05D005635 3.1e-61 240.0 395 43.3
HanXRQChr16g0514321 Helianthus annuus HOM05D004981 ORTHO05D005635 5.3e-61 239.2 387 46.3
arahy.Tifrunner.gnm1.ann1.NXB9BB Arachis hypogaea HOM05D004981 ORTHO05D005635 6.9e-61 238.8 411 44.3
AUR62010122 Chenopodium quinoa HOM05D004981 ORTHO05D005635 1.2e-60 238.0 398 47.5
Gohir.D02G196800 Gossypium hirsutum HOM05D004981 ORTHO05D005635 1.2e-60 238.0 406 45.1
arahy.Tifrunner.gnm1.ann1.NS4PA6 Arachis hypogaea HOM05D004981 ORTHO05D005635 4.5e-60 236.1 411 44.0
TPR.G9514 Trifolium pratense HOM05D004981 ORTHO05D005635 5.8e-60 235.7 340 50.9
Hma1.2p1_0704F.1_g206680 Hydrangea macrophylla HOM05D004981 ORTHO05D005635 1.0e-59 235.0 348 49.4
Sopen04g004240 Solanum pennellii HOM05D004981 ORTHO05D005635 1.0e-59 235.0 402 45.3
Phvul.006G206700 Phaseolus vulgaris HOM05D004981 ORTHO05D005635 2.2e-59 233.8 378 47.9
Solyc04g009060.4 Solanum lycopersicum HOM05D004981 ORTHO05D005635 2.9e-59 233.4 402 45.0
PGSC0003DMG400011507 Solanum tuberosum HOM05D004981 ORTHO05D005635 2.9e-59 233.4 402 45.3
ECA234G4021 Erigeron canadensis HOM05D004981 ORTHO05D005635 3.8e-59 233.0 389 47.3
Atru.chr5.2124 Acer truncatum HOM05D004981 ORTHO05D005635 8.4e-59 231.9 414 45.2
CAN.G274.6 Capsicum annuum HOM05D004981 ORTHO05D005635 1.1e-58 231.5 393 46.6
Lsat_1_v5_gn_5_107300 Lactuca sativa HOM05D004981 ORTHO05D005635 1.4e-58 231.1 381 47.2
Prupe.8G061500 Prunus persica HOM05D004981 ORTHO05D005635 3.2e-58 229.9 382 44.0
VMungo0540G0644 Vigna mungo HOM05D004981 ORTHO05D005635 7.1e-58 228.8 381 44.9
Cpa.g.sc49.24 Carica papaya HOM05D004981 ORTHO05D005635 2.7e-57 226.9 338 45.0
Oeu047361.1 Olea europaea HOM05D004981 ORTHO05D005635 4.6e-57 226.1 380 40.5
Lalb_Chr20g0123041 Lupinus albus HOM05D004981 ORTHO05D005635 6.0e-57 225.7 423 44.7
Potri.003G023700 Populus trichocarpa HOM05D004981 ORTHO05D005635 1.0e-56 224.9 396 44.9
Potri.001G205700 Populus trichocarpa HOM05D004981 ORTHO05D005635 1.1e-55 221.5 419 41.8
EL10Ac9g21471 Beta vulgaris HOM05D004981 ORTHO05D005635 1.9e-55 220.7 398 46.7
Duzib248G0633 Durio zibethinus HOM05D004981 ORTHO05D005635 3.3e-55 219.9 365 40.5
Glyma.08G179200 Glycine max HOM05D004981 ORTHO05D005635 4.3e-55 219.5 433 42.3
Prupe.5G160300 Prunus persica HOM05D004981 ORTHO05D005635 4.3e-55 219.5 397 49.4
SGA_v2.0_scaffold83G26298 Striga asiatica HOM05D004981 ORTHO05D005635 9.7e-55 218.4 422 41.5
Sc20g0002060 Simmondsia chinensis HOM05D004981 ORTHO05D005635 2.2e-54 217.2 329 45.3
Lj5A239G83 Lonicera japonica HOM05D004981 ORTHO05D005635 2.8e-54 216.9 344 42.4
Glyma.15G053300 Glycine max HOM05D004981 ORTHO05D005635 8.2e-54 215.3 433 40.2
Zm00001eb311320 Zea mays HOM05D004981 ORTHO05D005635 8.2e-54 215.3 406 41.4
RcHm_v2.0_Chr7g0191681 Rosa chinensis HOM05D004981 ORTHO05D005635 1.1e-53 214.9 404 43.6
ATR0753G166 Amborella trichopoda HOM05D004981 ORTHO05D005635 1.4e-53 214.5 449 38.8
COL.COLO4_24958 Corchorus olitorius HOM05D004981 ORTHO05D005635 2.4e-53 213.8 349 41.0
MD14G1166200 Malus domestica HOM05D004981 ORTHO05D005635 1.5e-52 211.1 390 47.2
FAN18G1425 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.0e-52 210.7 409 43.3
Nitab4.5_0008051g0010 Nicotiana tabacum HOM05D004981 ORTHO05D005635 3.4e-52 209.9 336 42.9
Peaxi162Scf00152g01024 Petunia axillaris HOM05D004981 ORTHO05D005635 7.7e-52 208.8 340 42.4
Ciclev10025761m.g Citrus clementina HOM05D004981 ORTHO05D005635 1.0e-51 208.4 414 41.8
Psat1g216680 Pisum sativum HOM05D004981 ORTHO05D005635 1.0e-51 208.4 335 42.4
FAN04G0403 Fragaria x ananassa HOM05D004981 ORTHO05D005635 2.2e-51 207.2 402 44.3
vmacro19928 Vaccinium macrocarpon HOM05D004981 ORTHO05D005635 2.2e-51 207.2 505 38.6
SalBow5G0436 Salvia bowleyana HOM05D004981 ORTHO05D005635 3.8e-51 206.5 373 44.0
DCAR_021855 Daucus carota HOM05D004981 ORTHO05D005635 5.0e-51 206.1 355 41.1
SEGI_39436 Sequoiadendron giganteum HOM05D004981 ORTHO05D005635 8.5e-51 205.3 306 42.5
FvH4_5g07000 Fragaria vesca HOM05D004981 ORTHO05D005635 1.8e-48 197.6 410 44.6
MSTRG.20297 Avicennia marina HOM05D004981 ORTHO05D005635 3.9e-48 196.4 265 47.2
Aa31LG3G17630 Aethionema arabicum HOM05D004981 ORTHO05D005635 6.7e-48 195.7 372 42.5
Nitab4.5_0000480g0020 Nicotiana tabacum HOM05D004981 ORTHO05D005635 6.7e-48 195.7 324 38.9
AUR62013118 Chenopodium quinoa HOM05D004981 ORTHO05D005635 1.9e-47 194.1 430 38.1
THA.LOC104818438 Tarenaya hassleriana HOM05D004981 ORTHO05D005635 5.7e-47 192.6 409 40.3
Eucgr.I02666 Eucalyptus grandis HOM05D004981 ORTHO05D005635 9.7e-47 191.8 261 47.1
Os09g0372400 Oryza sativa ssp. japonica HOM05D004981 ORTHO05D005635 1.3e-46 191.4 321 46.7
FAN08G0200 Fragaria x ananassa HOM05D004981 ORTHO05D005635 3.7e-46 189.9 396 42.4
Sp6g33940 Schrenkiella parvula HOM05D004981 ORTHO05D005635 3.7e-46 189.9 380 42.1
A10p27880 Brassica napus HOM05D004981 ORTHO05D005635 4.8e-46 189.5 370 41.1
BraA10t44837Z Brassica rapa HOM05D004981 ORTHO05D005635 4.8e-46 189.5 370 41.4
Oeu011769.5 Olea europaea HOM05D004981 ORTHO05D005635 6.3e-46 189.1 407 35.9
Dinv09034 Davidia involucrata HOM05D004981 ORTHO05D005635 1.1e-45 188.3 246 47.2
Pp3c22_4170 Physcomitrium patens HOM05D004981 ORTHO05D005635 1.2e-44 184.9 392 39.5
Sabra01G0158000 Salix brachista HOM05D004981 ORTHO05D005635 1.2e-44 184.9 402 35.6
BolC9t59557H Brassica oleracea HOM05D004981 ORTHO05D005635 1.0e-43 181.8 329 38.3
C09p67980 Brassica napus HOM05D004981 ORTHO05D005635 2.2e-43 180.6 329 37.7
Hund00058 Selenicereus undatus HOM05D004981 ORTHO05D005635 8.5e-43 178.7 337 40.7
BcaB08g37209 Brassica carinata HOM05D004981 ORTHO05D005635 9.4e-42 175.3 349 41.3
TPR.G21754 Trifolium pratense HOM05D004981 ORTHO05D005635 2.3e-40 170.6 237 46.0
Carub.0006s0794 Capsella rubella HOM05D004981 ORTHO05D005635 8.8e-40 168.7 378 41.8
Mapoly0041s0053 Marchantia polymorpha HOM05D004981 ORTHO05D005635 1.1e-39 168.3 411 41.4
AL6G19780 Arabidopsis lyrata HOM05D004981 ORTHO05D005635 3.3e-39 166.8 376 40.4
HPP92_013108 Vanilla planifolia HOM05D004981 ORTHO05D005635 3.3e-39 166.8 235 43.4
COL.COLO4_15286 Corchorus olitorius HOM05D004981 ORTHO05D005635 5.7e-39 166.0 253 45.1
Sabra03G0014800 Salix brachista HOM05D004981 ORTHO05D005635 1.7e-38 164.5 232 45.7
AT5G09390 Arabidopsis thaliana HOM05D004981 ORTHO05D005635 2.8e-38 163.7 377 38.2
Thhalv10013574m.g Eutrema salsugineum HOM05D004981 ORTHO05D005635 6.3e-38 162.5 373 41.6
CARHR204020 Cardamine hirsuta HOM05D004981 ORTHO05D005635 8.5e-35 152.1 358 36.9
Lj1g0016172 Lotus japonicus HOM05D004981 ORTHO05D005635 3.9e-32 143.3 337 34.1
CBR_g31506 Chara braunii HOM05D004981 ORTHO05D005635 6.7e-32 142.5 260 36.5
Medtr5g017190 Medicago truncatula HOM05D004981 ORTHO05D005635 2.6e-31 140.6 243 40.7
HPP92_013085 Vanilla planifolia HOM05D004981 ORTHO05D005635 2.8e-30 137.1 307 35.5
AagrBONN_evm.TU.Sc2ySwM_117.1804 Anthoceros agrestis HOM05D004981 ORTHO05D005635 1.4e-29 134.8 218 38.5
FAN08G2142 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.4e-29 134.8 384 36.5
SMO356G0631 Selaginella moellendorffii HOM05D004981 ORTHO05D005635 1.8e-29 134.4 264 36.0
FAN21G1455 Fragaria x ananassa HOM05D004981 ORTHO05D005635 1.6e-25 121.3 224 46.0
Ah.01g009610 Amaranthus hybridus HOM05D004981 ORTHO05D005635 5.7e-23 112.8 147 49.0
Ah.01g009580 Amaranthus hybridus HOM05D004981 ORTHO05D005635 1.9e-18 97.8 270 33.0
FvH4_4g13240 Fragaria vesca HOM05D004981 ORTHO05D005635 5.2e-16 89.7 159 39.6
FAN12G0625 Fragaria x ananassa HOM05D004981 ORTHO05D005635 5.7e-15 86.3 104 48.1
RcHm_v2.0_Chr7g0224681 Rosa chinensis HOM05D004981 ORTHO05D005635 2.2e-14 84.3 216 33.8
PRCOL_00000241 Prasinoderma coloniale HOM05D004981 ORTHO05D005635 7.0e-13 79.3 220 35.5
VMungo1383G1991 Vigna mungo HOM05D004981 ORTHO05D005635 7.0e-13 79.3 147 36.1
Lsat_1_v5_gn_5_82561 Lactuca sativa HOM05D004981 ORTHO05D005635 4.5e-12 76.6 83 54.2
VMungo1383G0650 Vigna mungo HOM05D004981 ORTHO05D005635 4.2e-10 70.1 131 38.2
Dinv07233 Davidia involucrata HOM05D004981 ORTHO05D005635 1.4e-08 65.1 68 51.5
Thecc.06G050700 Theobroma cacao HOM05D004981 ORTHO05D005635 1.5e-07 61.6 86 37.2
Hund06385 Selenicereus undatus HOM05D004981 ORTHO05D005635 1.7e-06 58.2 100 41.0
Cre06.g299450 Chlamydomonas reinhardtii HOM05D004981 ORTHO05D005635 3.7e-06 57.0 99 36.4


User provided reference genes

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