Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
PSO541G0326 Papaver somniferum HOM05D008529 ORTHO05D010219 1.0e-63 246.5 121 100.0
PSO063G3962 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-58 227.6 110 100.0
PSO210G6697 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-58 227.6 110 100.0
PSO339G5611 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-58 227.6 110 100.0
PSO461G0058 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-58 227.6 110 100.0
PSO461G0064 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-58 227.6 110 100.0
PSO478G1972 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-58 227.6 110 100.0
PSO541G2562 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-58 227.6 110 100.0
PSO700G0127 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-58 227.6 110 100.0
PSO832G0739 Papaver somniferum HOM05D008529 ORTHO05D010219 5.0e-58 227.6 110 100.0
PSO170G6734 Papaver somniferum HOM05D008529 ORTHO05D010219 6.5e-58 227.3 114 96.5
PSO133G0069 Papaver somniferum HOM05D008529 ORTHO05D010219 1.1e-57 226.5 110 99.1
PSO017G2108 Papaver somniferum HOM05D008529 ORTHO05D010219 1.5e-57 226.1 110 99.1
PSO063G4627 Papaver somniferum HOM05D008529 ORTHO05D010219 1.5e-57 226.1 110 99.1
PSO384G4172 Papaver somniferum HOM05D008529 ORTHO05D010219 1.5e-57 226.1 110 99.1
PSO384G4383 Papaver somniferum HOM05D008529 ORTHO05D010219 1.5e-57 226.1 110 99.1
PSO675G5337 Papaver somniferum HOM05D008529 ORTHO05D010219 1.5e-57 226.1 110 99.1
PSO782G5516 Papaver somniferum HOM05D008529 ORTHO05D010219 1.5e-57 226.1 110 99.1
PSO017G3549 Papaver somniferum HOM05D008529 ORTHO05D010219 1.9e-57 225.7 110 99.1
PSO017G2861 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO063G5131 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO170G2488 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO210G0056 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO210G2338 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO339G4421 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO384G0405 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO478G2872 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO541G0169 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO541G3973 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO541G6160 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO675G7323 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO724G0644 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO761G0474 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO761G0531 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO832G3163 Papaver somniferum HOM05D008529 ORTHO05D010219 2.5e-57 225.3 110 99.1
PSO063G7383 Papaver somniferum HOM05D008529 ORTHO05D010219 5.5e-57 224.2 110 98.2
PSO210G5199 Papaver somniferum HOM05D008529 ORTHO05D010219 5.5e-57 224.2 110 98.2
PSO384G0957 Papaver somniferum HOM05D008529 ORTHO05D010219 5.5e-57 224.2 110 98.2
PSO732G0541 Papaver somniferum HOM05D008529 ORTHO05D010219 5.5e-57 224.2 110 98.2
PSO761G0228 Papaver somniferum HOM05D008529 ORTHO05D010219 5.5e-57 224.2 110 98.2
PSO478G4936 Papaver somniferum HOM05D008529 ORTHO05D010219 7.2e-57 223.8 110 98.2
PSO386G0005 Papaver somniferum HOM05D008529 ORTHO05D010219 2.1e-56 222.2 110 98.2
PSO478G4463 Papaver somniferum HOM05D008529 ORTHO05D010219 3.6e-56 221.5 116 93.1
PSO541G0799 Papaver somniferum HOM05D008529 ORTHO05D010219 4.1e-52 208.0 110 92.7
PSO423G0120 Papaver somniferum HOM05D008529 ORTHO05D010219 2.7e-48 195.3 96 99.0
RcHm_v2.0_Chr6g0260681 Rosa chinensis HOM05D008529 ORTHO05D010219 1.9e-09 66.2 105 37.1
CiPaw.14G121300 Carya illinoinensis HOM05D001576 ORTHO05D010219 1.2e-08 63.5 104 32.7
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-08 61.6 102 31.4
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-08 61.6 102 31.4
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 4.7e-08 61.6 102 31.4
Rhsim03G0135600 Rhododendron simsii HOM05D001576 ORTHO05D010219 8.1e-08 60.8 113 31.9
RcHm_v2.0_Chr5g0049061 Rosa chinensis HOM05D007743 ORTHO05D010219 1.1e-07 60.5 89 33.7
CiPaw.08G157400 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-07 60.1 102 30.4
FAN19G3162 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.4e-07 60.1 87 35.6
FAN09G3614 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.8e-07 59.7 89 36.0
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.8e-07 59.7 108 29.6
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.8e-07 59.7 108 29.6
FAN05G2464 Fragaria x ananassa HOM05D007743 ORTHO05D004645 2.3e-07 59.3 99 32.3
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 2.3e-07 59.3 104 30.8
Atru.chr1.3225 Acer truncatum HOM05D001576 ORTHO05D010219 3.1e-07 58.9 95 32.6
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.1e-07 58.9 116 29.3
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.1e-07 58.9 108 28.7
FvH4_1g29461 Fragaria vesca HOM05D007743 ORTHO05D010219 4.0e-07 58.5 86 36.0
CiPaw.13G129900 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.2e-07 58.2 97 32.0
FAN18G3916 Fragaria x ananassa HOM05D007743 ORTHO05D004645 5.2e-07 58.2 99 32.3
FvH4_4g12912 Fragaria vesca HOM05D007743 ORTHO05D004645 6.8e-07 57.8 89 34.8
FAN08G2971 Fragaria x ananassa HOM05D007743 ORTHO05D004645 6.8e-07 57.8 99 31.3
Rhsim01G0133600 Rhododendron simsii HOM05D001576 ORTHO05D010219 6.8e-07 57.8 113 29.2
RcHm_v2.0_Chr2g0144051 Rosa chinensis HOM05D007743 ORTHO05D010219 6.8e-07 57.8 89 32.6
FvH4_2g00671 Fragaria vesca HOM05D007743 ORTHO05D004645 8.9e-07 57.4 89 34.8
FvH4_2g02401 Fragaria vesca HOM05D007743 ORTHO05D010219 1.2e-06 57.0 100 33.0
FAN09G0033 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.2e-06 57.0 99 31.3
FAN26G1874 Fragaria x ananassa HOM05D007743 ORTHO05D004645 1.2e-06 57.0 99 31.3
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-06 56.6 102 28.4
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-06 56.6 102 28.4
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-06 56.6 102 28.4
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-06 56.6 102 28.4
CiPaw.02G050500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.2 101 28.7
CiPaw.07G048000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.2 101 28.7
CiPaw.09G172800 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.2 101 29.7
CiPaw.11G197100 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.2 101 28.7
CiPaw.14G032000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.2 101 29.7
CiPaw.14G108500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.2 101 28.7
Rhsim09G0056800 Rhododendron simsii HOM05D001576 ORTHO05D010219 2.0e-06 56.2 113 30.1
Zm00001eb283200 Zea mays HOM05D000011 ORTHO05D000157 2.0e-06 56.2 102 25.5
CiPaw.14G029000 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-06 55.8 101 28.7
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.6e-06 55.8 99 30.3
FvH4_3g29014 Fragaria vesca HOM05D001576 ORTHO05D000401 2.6e-06 55.8 104 29.8
Os06g0660650 Oryza sativa ssp. japonica HOM05D001576 ORTHO05D000401 2.6e-06 55.8 103 30.1
CSS0031528 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.4e-06 55.5 100 28.0
CiPaw.01G283500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.4e-06 55.5 101 28.7
CiPaw.03G043000 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.4e-06 55.5 97 28.9
CiPaw.07G052000 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.4e-06 55.5 97 28.9
CiPaw.08G044500 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.4e-06 55.5 97 28.9
CiPaw.09G130900 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.4e-06 55.5 99 31.3
CiPaw.10G012800 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.4e-06 55.5 97 28.9
FvH4_7g13271 Fragaria vesca HOM05D001576 ORTHO05D000401 3.4e-06 55.5 104 29.8
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.4e-06 55.5 106 27.4
Rhsim13G0212700 Rhododendron simsii HOM05D002367 ORTHO05D011821 3.4e-06 55.5 106 32.1
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.4e-06 55.5 106 27.4
CSS0047725 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.4e-06 55.1 100 28.0
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 4.4e-06 55.1 100 29.0
CiPaw.02G091600 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.8e-06 54.7 97 28.9
CiPaw.05G126800 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.8e-06 54.7 114 28.9
CiPaw.07G099700 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.8e-06 54.7 104 29.8
CiPaw.14G031000 Carya illinoinensis HOM05D001576 ORTHO05D000401 5.8e-06 54.7 101 28.7
CiPaw.01G075100 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.6e-06 54.3 101 29.7
CiPaw.04G176500 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.6e-06 54.3 89 32.6
CiPaw.15G112900 Carya illinoinensis HOM05D001576 ORTHO05D000401 7.6e-06 54.3 106 30.2
vmacro04017 Vaccinium macrocarpon HOM05D009738 ORTHO05D011821 7.6e-06 54.3 106 29.2
CiPaw.02G131900 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.9e-06 53.9 111 32.4
CiPaw.05G086200 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.9e-06 53.9 111 32.4
CiPaw.11G142700 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.9e-06 53.9 93 30.1
CiPaw.13G033200 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.9e-06 53.9 111 32.4
CiPaw.13G160200 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.9e-06 53.9 111 32.4
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 9.9e-06 53.9 106 27.4
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 9.9e-06 53.9 106 27.4


User provided reference genes

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